PI0024095 (gene) Melon (PI 482460) v1

Overview


Name	PI0024095
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr09: 16735107 .. 16737185 (+)
RNA-Seq Expression	PI0024095
Synteny	PI0024095

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACTTCACACAAAATAAATAAACTTCTTCATCCTCTCTCCTCCAAAACTCAATCGGCATCCTTGTCGTTGGTTTGGCGGAGAGAAAATGATGGGGGAAGATCGCGGCCTTCCTCCTCATTGCTTTTCTCATCTTCTTTTCTTTTTCTGAATCCTTCCCATATTCATCCAAAGGCATGCTCATCCACTTTCTCTAGAGGTAAATTCGTATTTTACATTTTCCATTCTTCATCTTTGATTTTGATTTGATTTTTCTTTTCTTTCATTTTTAGTTCGATTTTCATTAGGTTTCATTTCTTTGAATTTCTGTTCTCCCGTTCCGTTGGAATGTTGCGGGCGATTGATTTTGTTGTTGTCAATAATTTTGTGAATTATTCATATCCAAACTCTGATCGAAGTTTGGCTTTCGAATATGCATCTTGGAGCAAATGTATTGCCTCGGCACCAATTTGTCTTCTTTTTCTCTATTCTGGAATATGATATTTATGTATATCTGTTACAATGTTTGTCAATATTCTTCGCTTTTGATTATTTTGTGACACTGGGCTTGTCTGTAAATTGTTTCTCTGAGTTATTGCTTTCCTTTTGTTCTTTTGTGTTTTTTTTTTTTTTTTTTTTGGTAGTAATCTACTTATTTGCTTAAGGCTTGGATATCGAAAATTGTTGAATTGGCAGCAGCCATCTGACGCTAGCAGAGAAGTTTTGTTGTGATTTTATTGTTTGTTTTTAGTGTTGAAATCTTCGGAAGAAAAATGTCCTTATTTCTCGAAAATTTTCCATATAAGTAATACTTTGATACCATTTAATTAGATTTGATTTTTAGTTTCTGAAAATTAAGTCTATATAAGCTCCCATTTTACCTTTTAACTATTGTGTTTTGTTGCTAATGTTCTAAAAAACCAAGTCAAATTTGAAAACTAAAAAAATATATTTACGAACTTGTTTGTTTTTGGAATATGGGTAAGAATTCAATCTAATCGTGGTAAGGAAATGAGAGAAAATAGACTTCATTTTCAAAAACTAAAAACCAAATAGTTACGGAAGAAAAGTCTTTGGTAACTATTTGTGTTTTTAGTAAAAACCATCCAGTCAATTTCACTAGAGAGGTTCCATAGTTTTCAAACTATCGTCTTCAAAGATATTATTACTAAGATGTATAATATTTTTATAAGAACATCTTTAATTTGGAAGAACTGTTTCTTTGTAGGAGGCTTTGTAGTTTTTCTTTCATAGATGAACATCTATTTTGCTGATGTGCTGTTTATGGCATATTGAAACAATACTTCTGTCGTCCCTTTGGGGACACCCGATTAAATAGAAACAATTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGTATCTAAGCAAGCTTTCTGGGAGTGCTCGGATGACGAGGTTTGCTCGGAAGCCAGTAGAGATGAAGAATTGGAATGCCCTATATGCTGGGAATCTTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCACTCGTTGTGCAAAAATTGTGTATTAGGCCTCCAAGGGTCTGTGCTGAAACTAGCGACTCGCCAAATCCGAATACCGATAGTCATTTCGTGCCCTTGGTGTCATCAGCTATCACTAAGGGTGGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATTCGGACAATCAACCAGTTTTTTCTTTGCCATCGGGTACCGGTATCGTTACTTCTGAGACGCGACGATTGTTTTCCTATAATCATTTGGATTGCATCGTCCATTTAATCTTCAAGTCTCTACTTGTTGTCATGTTTGTTCTGATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTATCTGCTAATCACTTTACTTTTTGCATTGCCATCTTTGCTGATATTTTACCTTGCACTCCATGCTCTGGAAAAGCTTATGAATGATATAACTTCATGAAATGTTTTAACCAATGTCATTTGGTGAATTTCAAACAA

mRNA sequence

AAACTTCACACAAAATAAATAAACTTCTTCATCCTCTCTCCTCCAAAACTCAATCGGCATCCTTGTCGTTGGTTTGGCGGAGAGAAAATGATGGGGGAAGATCGCGGCCTTCCTCCTCATTGCTTTTCTCATCTTCTTTTCTTTTTCTGAATCCTTCCCATATTCATCCAAAGGCATGCTCATCCACTTTCTCTAGAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGTATCTAAGCAAGCTTTCTGGGAGTGCTCGGATGACGAGGTTTGCTCGGAAGCCAGTAGAGATGAAGAATTGGAATGCCCTATATGCTGGGAATCTTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCACTCGTTGTGCAAAAATTGTGTATTAGGCCTCCAAGGGTCTGTGCTGAAACTAGCGACTCGCCAAATCCGAATACCGATAGTCATTTCGTGCCCTTGGTGTCATCAGCTATCACTAAGGGTGGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATTCGGACAATCAACCAGTTTTTTCTTTGCCATCGGGTACCGGTATCGTTACTTCTGAGACGCGACGATTGTTTTCCTATAATCATTTGGATTGCATCGTCCATTTAATCTTCAAGTCTCTACTTGTTGTCATGTTTGTTCTGATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTATCTGCTAATCACTTTACTTTTTGCATTGCCATCTTTGCTGATATTTTACCTTGCACTCCATGCTCTGGAAAAGCTTATGAATGATATAACTTCATGAAATGTTTTAACCAATGTCATTTGGTGAATTTCAAACAA

Coding sequence (CDS)

ATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGTATCTAAGCAAGCTTTCTGGGAGTGCTCGGATGACGAGGTTTGCTCGGAAGCCAGTAGAGATGAAGAATTGGAATGCCCTATATGCTGGGAATCTTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCACTCGTTGTGCAAAAATTGTGTATTAGGCCTCCAAGGGTCTGTGCTGAAACTAGCGACTCGCCAAATCCGAATACCGATAGTCATTTCGTGCCCTTGGTGTCATCAGCTATCACTAAGGGTGGTATACAAGGGGAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATTCGGACAATCAACCAGTTTTTTCTTTGCCATCGGGTACCGGTATCGTTACTTCTGAGACGCGACGATTGTTTTCCTATAATCATTTGGATTGCATCGTCCATTTAATCTTCAAGTCTCTACTTGTTGTCATGTTTGTTCTGATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTATCTGCTAATCACTTTACTTTTTGCATTGCCATCTTTGCTGATATTTTACCTTGCACTCCATGCTCTGGAAAAGCTTATGAATGATATAACTTCATGA

Protein sequence

MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVTSETRRLFSYNHLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNDITS

Homology

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BLAST of PI0024095 vs. ExPASy Swiss-Prot
Match: Q9H0X6 (RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 6.9e-05
Identity = 26/67 (38.81%), Postives = 34/67 (50.75%), Query Frame = 0


Query: 35  SEASRDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVI 94
           S A+  E LECP C  S+N+ +  P VL C HS+C+ C+  L  S  K           I
Sbjct: 133 SSAAAGEPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK--------FI 191

Query: 95  SCPWCHQ 102
           SCP C +
Sbjct: 193 SCPTCRR 191

[Close]

BLAST of PI0024095 vs. ExPASy Swiss-Prot
Match: Q8K0W3 (RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 9.0e-05
Identity = 24/61 (39.34%), Postives = 32/61 (52.46%), Query Frame = 0


Query: 41  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCH 100
           E LECP C  ++N+ +  P VL C HS+C+ C+  L  S  K           ISCP CH
Sbjct: 143 EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK--------FISCPTCH 195

Query: 101 Q 102
           +
Sbjct: 203 R 195

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BLAST of PI0024095 vs. ExPASy Swiss-Prot
Match: Q96D59 (E3 ubiquitin-protein ligase RNF183 OS=Homo sapiens OX=9606 GN=RNF183 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04
Identity = 24/69 (34.78%), Postives = 35/69 (50.72%), Query Frame = 0


Query: 33  VCSEASRDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPI 92
           +  +  R+ E ECP+CW  FN   + P +L C HS C  C+  L  S++  A R+     
Sbjct: 1   MAEQQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL--SLVTPARRR----- 60

Query: 93  VISCPWCHQ 102
            + CP C Q
Sbjct: 61  -LLCPLCRQ 61

[Close]

BLAST of PI0024095 vs. ExPASy Swiss-Prot
Match: Q13049 (E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-04
Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 41  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCH 100
           E LECPIC ESF   +  P +L CGH++C+ C+  L  S +            + CP+C 
Sbjct: 16  EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 68

Query: 101 QLS 104
           +++
Sbjct: 76  KIT 68

[Close]

BLAST of PI0024095 vs. ExPASy Swiss-Prot
Match: Q8CH72 (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-04
Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 41  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCH 100
           E LECPIC ESF   +  P +L CGH++C+ C+  L  S +            + CP+C 
Sbjct: 17  EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRCPFCS 69

Query: 101 QLS 104
           +++
Sbjct: 77  KIT 69

[Close]

BLAST of PI0024095 vs. ExPASy TrEMBL
Match: A0A1S3CPH8 (uncharacterized protein LOC103503329 OS=Cucumis melo OX=3656 GN=LOC103503329 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 218/234 (93.16%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNAIAGIRSKKNS V KQ FWECSDDEVCSEASRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVTSETRRLFSYNHLDCIVHLIFKSL 180
           LLWMVESFNGNEGKLDHSFNSDNQ VFSLPSGT  VTSE RRLF YNHLDC++HL+FK L
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLPSGT--VTSERRRLFFYNHLDCVIHLVFKFL 180

Query: 181 LVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNDITS 235
           L V+FVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL+KLMNDITS
Sbjct: 181 LTVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALDKLMNDITS 232

[Close]

BLAST of PI0024095 vs. ExPASy TrEMBL
Match: A0A5A7TGX0 (Zf-RING_LisH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00120 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 218/234 (93.16%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNAIAGIRSKKNS V KQ FWECSDDEVCSEASRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVTSETRRLFSYNHLDCIVHLIFKSL 180
           LLWMVESFNGNEGKLDHSFNSDNQ VFSLPSGT  VTSE RRLF YNHLDC++HL+FK L
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLPSGT--VTSERRRLFFYNHLDCVIHLVFKFL 180

Query: 181 LVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNDITS 235
           L V+FVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL+KLMNDITS
Sbjct: 181 LTVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALDKLMNDITS 232

[Close]

BLAST of PI0024095 vs. ExPASy TrEMBL
Match: A0A6J1G3L5 (uncharacterized protein LOC111450453 OS=Cucurbita moschata OX=3662 GN=LOC111450453 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.5e-106
Identity = 204/249 (81.93%), Postives = 213/249 (85.54%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNA AGIRSK NSAVSKQAFWECSDDEVCSE SRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGH+LC+NCVLGLQG VLKLATRQIRIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVT---------------SETRRLFS 180
           LLWMVES NGNEGKLDH FN DNQPVFSLP      +                  RRLFS
Sbjct: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSRHGIERRRRLFS 180

Query: 181 YNHLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 235
           Y HLDC++HLIFK LL V+FVLIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240

[Close]

BLAST of PI0024095 vs. ExPASy TrEMBL
Match: A0A6J1KAL8 (uncharacterized protein LOC111493743 OS=Cucurbita maxima OX=3661 GN=LOC111493743 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.2e-106
Identity = 206/249 (82.73%), Postives = 214/249 (85.94%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNA AGIRSK NSAVSKQAFWECSDDEVCSE SRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGH+LC+NCVLGLQG VLKLATRQIRIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVTSE-------------TRR--LFS 180
           LLWMVES NGNEGKLDH FN DNQPVFSLP      +                RR  LFS
Sbjct: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVNRHGIERRPWLFS 180

Query: 181 YNHLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 235
           Y HLDC++HLIFK LLVV+FVLIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YEHLDCLIHLIFKFLLVVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240

[Close]

BLAST of PI0024095 vs. ExPASy TrEMBL
Match: A0A6J1D940 (uncharacterized protein LOC111018502 OS=Momordica charantia OX=3673 GN=LOC111018502 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.3e-102
Identity = 198/248 (79.84%), Postives = 215/248 (86.69%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNAIAGIR +KNS VSKQ FWECSDDEVCSEASRDE LECPICWESFNIVEN+PY
Sbjct: 1   MWKLASNAIAGIRLRKNSVVSKQVFWECSDDEVCSEASRDEGLECPICWESFNIVENIPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGH+LCKNCVLGLQGSVLK+ATRQIR+PI ISCPWCHQLSLR+VYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQGSVLKVATRQIRVPICISCPWCHQLSLRLVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVTSE--------------TRRLFSY 180
           LLWMVESFN +EGKLDHSFN DNQPVF LPS T  V+SE               R LF Y
Sbjct: 121 LLWMVESFNDDEGKLDHSFNGDNQPVFPLPSDTETVSSERLDSHVSRHGIGRRRRWLFVY 180

Query: 181 NHLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALE 235
            +LD ++HLI K LLVV+F+LIVVFVIPGSA+ILLLYLLIT LFALPSLL+FYLALHALE
Sbjct: 181 KYLDWLIHLISKFLLVVIFLLIVVFVIPGSAVILLLYLLITFLFALPSLLVFYLALHALE 240

[Close]

BLAST of PI0024095 vs. NCBI nr
Match: XP_011655300.2 (uncharacterized protein LOC101218619 [Cucumis sativus] >XP_031741070.1 uncharacterized protein LOC101218619 [Cucumis sativus] >KAE8648500.1 hypothetical protein Csa_008920 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 2.7e-115
Identity = 220/236 (93.22%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNAIAGIRSKKNS VSKQ FWECSDDE CSEASRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVSKQVFWECSDDEACSEASRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPS--GTGIVTSETRRLFSYNHLDCIVHLIFK 180
           LLWMVESFNGNEGKLDHSFNSDN P+FSLPS  GTG VTSE RRLF YNHLD +VHLIFK
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNHPLFSLPSGTGTGTVTSERRRLFFYNHLDFVVHLIFK 180

Query: 181 SLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNDITS 235
            LL+V+FVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLA HALEKLMNDITS
Sbjct: 181 FLLLVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLAFHALEKLMNDITS 236

[Close]

BLAST of PI0024095 vs. NCBI nr
Match: XP_008465708.1 (PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo] >XP_008465709.1 PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo] >XP_008465710.1 PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo] >KAA0040509.1 zf-RING_LisH domain-containing protein [Cucumis melo var. makuwa] >TYK23453.1 zf-RING_LisH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 425.2 bits (1092), Expect = 3.5e-115
Identity = 218/234 (93.16%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNAIAGIRSKKNS V KQ FWECSDDEVCSEASRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVTSETRRLFSYNHLDCIVHLIFKSL 180
           LLWMVESFNGNEGKLDHSFNSDNQ VFSLPSGT  VTSE RRLF YNHLDC++HL+FK L
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLPSGT--VTSERRRLFFYNHLDCVIHLVFKFL 180

Query: 181 LVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNDITS 235
           L V+FVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL+KLMNDITS
Sbjct: 181 LTVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALDKLMNDITS 232

[Close]

BLAST of PI0024095 vs. NCBI nr
Match: XP_038890517.1 (uncharacterized protein LOC120080047 [Benincasa hispida])

HSP 1 Score: 407.5 bits (1046), Expect = 7.6e-110
Identity = 211/236 (89.41%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNAIAGIR KKNS   KQ FWECSDDEVCSEASRDEELECPICWESFN+VENVPY
Sbjct: 1   MWKLASNAIAGIRPKKNSTAPKQVFWECSDDEVCSEASRDEELECPICWESFNLVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPI +SCPWCHQLSLRVVY+GNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFLSCPWCHQLSLRVVYRGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVT--SETRRLFSYNHLDCIVHLIFK 180
           LLWMVESFNGNEGK DHSFN DNQPVFSLPS T   T  SE RRLF YNHLD +VHLIFK
Sbjct: 121 LLWMVESFNGNEGKHDHSFNGDNQPVFSLPSETDTDTDISERRRLFFYNHLDFVVHLIFK 180

Query: 181 SLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNDITS 235
            LLVV+F+LIVVFVIPGSALILLLYLLITLL ALPSLLIFYLALHALEKLMNDITS
Sbjct: 181 FLLVVIFLLIVVFVIPGSALILLLYLLITLLLALPSLLIFYLALHALEKLMNDITS 236

[Close]

BLAST of PI0024095 vs. NCBI nr
Match: KAG6599045.1 (hypothetical protein SDJN03_08823, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 205/249 (82.33%), Postives = 213/249 (85.54%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNA AGIRSK NSAVSKQAFWECSDDEVCSE SRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGH+LC+NCVLGLQG VLKLATRQIRIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVT---------------SETRRLFS 180
           LLWMVES NGNEGKLDH FN DNQPVFSLP      +                  RRLFS
Sbjct: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDADASQRHSFSDGRVSRHGIERRRRLFS 180

Query: 181 YNHLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 235
           Y HLDC++HLIFK LL V+FVLIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240

[Close]

BLAST of PI0024095 vs. NCBI nr
Match: KAG7029990.1 (hypothetical protein SDJN02_08334, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 205/249 (82.33%), Postives = 213/249 (85.54%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60
           MWKLASNA AGIRSK NSAVSKQAFWECSDDEVCSE SRDEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAFAGIRSKNNSAVSKQAFWECSDDEVCSEDSRDEELECPICWESFNIVENVPY 60

Query: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120
           VLWCGH+LC+NCVLGLQG VLKLATRQIRIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHTLCRNCVLGLQGYVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 121 LLWMVESFNGNEGKLDHSFNSDNQPVFSLPSGTGIVT---------------SETRRLFS 180
           LLWMVES NGNEGKLDH FN DNQPVFSLP      +                  RRLFS
Sbjct: 121 LLWMVESLNGNEGKLDHPFNGDNQPVFSLPPSDANASQRHSFSDGRVSRHGIERRRRLFS 180

Query: 181 YNHLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL 235
           Y HLDC++HLIFK LL V+FVLIVVFVIPGSALILLLYLLIT LFALPSLLIFY++LHAL
Sbjct: 181 YEHLDCVIHLIFKFLLAVIFVLIVVFVIPGSALILLLYLLITFLFALPSLLIFYISLHAL 240

[Close]

BLAST of PI0024095 vs. TAIR 10
Match: AT1G69330.1 (RING/U-box superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 3.8e-59
Identity = 137/270 (50.74%), Postives = 170/270 (62.96%), Query Frame = 0


Query: 1   MWKLASNAIAGIRSKKNSAVSKQAFWECSDDEVCSEASRDEE-LECPICWESFNIVENVP 60
           MW  ASN I  +  KK+   S QA  +CSDDEV S  SRDEE LECPICWESFNIVENVP
Sbjct: 1   MWGFASNVIGSMGLKKSPKDSAQASSQCSDDEV-SNISRDEEGLECPICWESFNIVENVP 60

Query: 61  YVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNF 120
           YVLWCGH+LC+NCV GLQ +VL+L+++ IRIP  +SCPWC  LS R+VYKGNLKFP KNF
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 121 FLLWMVESFNGNE----GKLDH-SFNSDNQPVFSLP----------SGTGIV-------- 180
           FLLWMVES NG+      +  H S  +DNQ     P          S   +V        
Sbjct: 121 FLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLRNQ 180

Query: 181 -----------TSETRRLFSYN-HLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYL 235
                         +R+LFS++  LD  +    K   V++F+LIV F IPGS +IL LY 
Sbjct: 181 STDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYF 240

[Close]

BLAST of PI0024095 vs. TAIR 10
Match: AT3G29270.1 (RING/U-box superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 4.5e-52
Identity = 117/255 (45.88%), Postives = 158/255 (61.96%), Query Frame = 0


Query: 1   MWKLASNAIAG-IRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVP 60
           MW LAS+ + G I  K +      A  ECSDD+V S  S+DE LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  YVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNF 120
           YVLWCGH++CKNC+LGLQ +++KL T  +++P+ ISCPWC+ LS R+V++G L+FP KN+
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVESFNG----------NEGKLDHSFNSD----------NQPVFSLPSGTGIVTSE 180
           F+LWMVE  NG           +G  DH+  +           +QP  S       +  +
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSPCLHNRHHRSQPEPSRSVNDHRIPRD 188

Query: 181 TRRLFSYNHLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFY 235
             +      L   V L  K  LVV+F+LI+++ IP SA IL +Y+L+TLL ALPS LI Y
Sbjct: 189 NIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLLALPSFLILY 248

[Close]

BLAST of PI0024095 vs. TAIR 10
Match: AT3G29270.2 (RING/U-box superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 4.5e-52
Identity = 117/255 (45.88%), Postives = 158/255 (61.96%), Query Frame = 0


Query: 1   MWKLASNAIAG-IRSKKNSAVSKQAFWECSDDEVCSEASRDEELECPICWESFNIVENVP 60
           MW LAS+ + G I  K +      A  ECSDD+V S  S+DE LECPICWESFNIVENVP
Sbjct: 9   MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVENVP 68

Query: 61  YVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNF 120
           YVLWCGH++CKNC+LGLQ +++KL T  +++P+ ISCPWC+ LS R+V++G L+FP KN+
Sbjct: 69  YVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHKNY 128

Query: 121 FLLWMVESFNG----------NEGKLDHSFNSD----------NQPVFSLPSGTGIVTSE 180
           F+LWMVE  NG           +G  DH+  +           +QP  S       +  +
Sbjct: 129 FVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSPCLHNRHHRSQPEPSRSVNDHRIPRD 188

Query: 181 TRRLFSYNHLDCIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFY 235
             +      L   V L  K  LVV+F+LI+++ IP SA IL +Y+L+TLL ALPS LI Y
Sbjct: 189 NIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLLALPSFLILY 248

[Close]

BLAST of PI0024095 vs. TAIR 10
Match: AT1G74370.1 (RING/U-box superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 4.0e-40
Identity = 107/267 (40.07%), Postives = 151/267 (56.55%), Query Frame = 0


Query: 1   MWKLASNAI-AGIRSKKNSAVSK--QAFWECSDDEVCSEASRDEELECPICWESFNIVEN 60
           MW LAS +I  G  SK   A +K  +A  + S D    + +++E+LECPICWESFN+VEN
Sbjct: 1   MWNLASKSIREGFISKGEEAATKPRRATLDRSGDG--RKTTKEEKLECPICWESFNVVEN 60

Query: 61  VPYVLWCGHSLCKNCVLGLQGS-VLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPS 120
           VPYVLWCGH++CK C+LGLQ + V+K +    ++P  ++CPWC+ LSLR+V  G ++FPS
Sbjct: 61  VPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPS 120

Query: 121 KNFFLLWMVESFNGNEGKLDHSFNSDNQPVFS---------------------LPSGTGI 180
           KNF+LLWMVES NG+  +      SDN+ V S                     L      
Sbjct: 121 KNFYLLWMVESMNGSRSEAP----SDNKRVASGQRDLRNRCDGVSNTALGDEGLLDNRSW 180

Query: 181 VTSETRRLFSYNHLD--------CIVHLIFKSLLVVMFVLIVVFVIPGSALILLLYLLIT 235
               TR  F    L          + HL+ K  LVV+F+L+ ++ IP SA +L +Y  +T
Sbjct: 181 WNGVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVT 240

[Close]

BLAST of PI0024095 vs. TAIR 10
Match: AT1G21651.1 (zinc ion binding )

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-05
Identity = 22/59 (37.29%), Postives = 30/59 (50.85%), Query Frame = 0


Query: 41  EELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWC 100
           EE ECP+C +S++    VP VL CGH+ C+ C+  L            + P  I CP C
Sbjct: 2   EEPECPVCLQSYDGESTVPRVLACGHTACEECLTNLPK----------KFPDTIRCPAC 50

The following BLAST results are available for this feature:

BLAST of PI0024095 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9H0X6	6.9e-05	38.81	RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2	[more]
Q8K0W3	9.0e-05	39.34	RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2	[more]
Q96D59	2.0e-04	34.78	E3 ubiquitin-protein ligase RNF183 OS=Homo sapiens OX=9606 GN=RNF183 PE=1 SV=2	[more]
Q13049	2.6e-04	34.92	E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2	[more]
Q8CH72	2.6e-04	34.92	E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2	[more]

BLAST of PI0024095 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPH8	1.7e-115	93.16	uncharacterized protein LOC103503329 OS=Cucumis melo OX=3656 GN=LOC103503329 PE=...	[more]
A0A5A7TGX0	1.7e-115	93.16	Zf-RING_LisH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1G3L5	2.5e-106	81.93	uncharacterized protein LOC111450453 OS=Cucurbita moschata OX=3662 GN=LOC1114504...	[more]
A0A6J1KAL8	7.2e-106	82.73	uncharacterized protein LOC111493743 OS=Cucurbita maxima OX=3661 GN=LOC111493743...	[more]
A0A6J1D940	1.3e-102	79.84	uncharacterized protein LOC111018502 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of PI0024095 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655300.2	2.7e-115	93.22	uncharacterized protein LOC101218619 [Cucumis sativus] >XP_031741070.1 uncharact...	[more]
XP_008465708.1	3.5e-115	93.16	PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo] >XP_008465709.1 P...	[more]
XP_038890517.1	7.6e-110	89.41	uncharacterized protein LOC120080047 [Benincasa hispida]	[more]
KAG6599045.1	1.8e-106	82.33	hypothetical protein SDJN03_08823, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7029990.1	1.8e-106	82.33	hypothetical protein SDJN02_08334, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of PI0024095 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69330.1	3.8e-59	50.74	RING/U-box superfamily protein	[more]
AT3G29270.1	4.5e-52	45.88	RING/U-box superfamily protein	[more]
AT3G29270.2	4.5e-52	45.88	RING/U-box superfamily protein	[more]
AT1G74370.1	4.0e-40	40.07	RING/U-box superfamily protein	[more]
AT1G21651.1	3.2e-05	37.29	zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 33..137 e-value: 6.9E-13 score: 49.9
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 45..73 e-value: 6.1E-8 score: 32.6
None	No IPR available	PANTHER	PTHR46616:SF1	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 160..234 coord: 1..151
None	No IPR available	PANTHER	PTHR46616	UBIQUITIN-PROTEIN LIGASE	coord: 160..234 coord: 1..151
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 40..102
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 64..73
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 45..100 score: 9.951762

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024095.1	PI0024095.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity