PI0024080 (gene) Melon (PI 482460) v1

Overview


Name	PI0024080
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NDR1/HIN1-like protein 10
Location	chr04: 5549617 .. 5550192 (-)
RNA-Seq Expression	PI0024080
Synteny	PI0024080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACGTTTTTTATGGTGTCTTTTAATATCCGTCATTATTGTGTTCACAATATCTTTTGGGTTCTCTATATTGATCTTATGGCTTCTTTTCATAACCAACAAGATCAAATTCGACGTAACCGATGCCACTCTCACCCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTTGGTGTATACTTCACCATTAGAAACCCTAATAAGCAAATTGGAATCTACTACGACACAATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCTAGGACTACAAGCTTACTTAAAGGACGATTTGAAGGGCAGCAGGTTATGGTCATTCCCAACAACACGGTTTCTGAATTAAATTCTGAGAAACTTTCTGGGGTTTATTCAATTGATGTCAAATTTCGTCTTTATTTGAAGTTGAAATTTGGGCTTTATAAAATCATTAGAGTTAGGCCTAAAGTGGGATGTGGATTCCAAATTCCATTGAATTCCAGTGGAACTTCTTCTTTTCAGAATGCTATTCGTTGTGATGTTGATTATTGA

mRNA sequence

ATGGCACGTTTTTTATGGTGTCTTTTAATATCCGTCATTATTGTGTTCACAATATCTTTTGGGTTCTCTATATTGATCTTATGGCTTCTTTTCATAACCAACAAGATCAAATTCGACGTAACCGATGCCACTCTCACCCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTTGGTGTATACTTCACCATTAGAAACCCTAATAAGCAAATTGGAATCTACTACGACACAATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCTAGGACTACAAGCTTACTTAAAGGACGATTTGAAGGGCAGCAGGTTATGGTCATTCCCAACAACACGGTTTCTGAATTAAATTCTGAGAAACTTTCTGGGGTTTATTCAATTGATGTCAAATTTCGTCTTTATTTGAAGTTGAAATTTGGGCTTTATAAAATCATTAGAGTTAGGCCTAAAGTGGGATGTGGATTCCAAATTCCATTGAATTCCAGTGGAACTTCTTCTTTTCAGAATGCTATTCGTTGTGATGTTGATTATTGA

Coding sequence (CDS)

ATGGCACGTTTTTTATGGTGTCTTTTAATATCCGTCATTATTGTGTTCACAATATCTTTTGGGTTCTCTATATTGATCTTATGGCTTCTTTTCATAACCAACAAGATCAAATTCGACGTAACCGATGCCACTCTCACCCAATTCAACTTCACCAACAATGACACTCAACTCCATTACAATCTTGGTGTATACTTCACCATTAGAAACCCTAATAAGCAAATTGGAATCTACTACGACACAATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCTAGGACTACAAGCTTACTTAAAGGACGATTTGAAGGGCAGCAGGTTATGGTCATTCCCAACAACACGGTTTCTGAATTAAATTCTGAGAAACTTTCTGGGGTTTATTCAATTGATGTCAAATTTCGTCTTTATTTGAAGTTGAAATTTGGGCTTTATAAAATCATTAGAGTTAGGCCTAAAGTGGGATGTGGATTCCAAATTCCATTGAATTCCAGTGGAACTTCTTCTTTTCAGAATGCTATTCGTTGTGATGTTGATTATTGA

Protein sequence

MARFLWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVYFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPNNTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSSFQNAIRCDVDY

Homology

[Close]

BLAST of PI0024080 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-37
Identity = 85/191 (44.50%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           L  L + VII   +  G + LI WL+     IKF VTDA+LT+F+ T+ D  L YNL + 
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
             +RNPNK+IG+YYD IEA A Y+G+ F T  LTPFYQG + T++L   F+GQ +++   
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGC-GFQIPLNSSG---TSS 184
                LN+E++SGVY+I++KFRL ++ K G  K  R++PKV C   ++PL++S    T+S
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 216

Query: 185 FQNAIRCDVDY 192
               I+CD D+
Sbjct: 217 TVFPIKCDFDF 227

[Close]

BLAST of PI0024080 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-33
Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 0


Query: 8   LLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNF--TNNDTQLHYNLGVYF 67
           ++ +++I   +  G + LI+WL+F  N IKF VTDA LT+F    TNN   L YNL + F
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNN---LRYNLDLNF 106

Query: 68  TIRNPNKQIGIYYDTIEATAMYKGQNFD-TRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 127
           TIRNPN++IG+YYD IE    Y  Q F  +  ++ FYQG + T+++  +  GQQ++++  
Sbjct: 107 TIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDG 166

Query: 128 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSSFQ-N 187
               +LN +  S +Y ID K RL ++ KFGL K  R +PK+ C  ++PL S+ TS F   
Sbjct: 167 GERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQ 226

Query: 188 AIRCDVDY 192
             +CDVD+
Sbjct: 227 PTKCDVDF 231

[Close]

BLAST of PI0024080 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.9e-30
Identity = 71/187 (37.97%), Postives = 117/187 (62.57%), Query Frame = 0


Query: 8   LLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVYFTI 67
           L+ +++I   +  G + LILWL+F  N +KF V DA L +F+F  N+  LHY+L + FTI
Sbjct: 54  LICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLNFTI 113

Query: 68  RNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPNNTV 127
           RNPN+++G+YYD    +  Y  Q F +  ++ FYQG + T+++  + EGQ ++V+ +   
Sbjct: 114 RNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGAR 173

Query: 128 SELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGC-GFQIPL---NSSGTSSFQN 187
           ++L  ++ SG+Y I+ K RL ++ KF   K  +++PK+ C   +IPL   NS+G   FQ 
Sbjct: 174 TDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQ- 233

Query: 188 AIRCDVD 191
            ++CD D
Sbjct: 234 PVQCDFD 238

[Close]

BLAST of PI0024080 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 52/148 (35.14%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 33  TNKIKFDVTDATLTQFNFTNNDTQLHYNLGVYFTIRNPNKQIGIYYDTIEATAMYKGQNF 92
           +N +KF V DA LT F+  +N+  L Y+L +  +IRN    IGI+YD  EAT  Y  Q  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 93  DTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPNNTVSELNSEKLSGVYSIDVKFRLYLKLK 152
               +  FY GS+ T LL+  FEGQ ++++  N   +   ++ +GVY IDVK  +  ++ 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 153 FGLYKIIRVRPKVGCGFQIPLNSSGTSS 181
                   ++P V C  +IPL    ++S
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

[Close]

BLAST of PI0024080 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09
Identity = 49/162 (30.25%), Postives = 80/162 (49.38%), Query Frame = 0


Query: 14  IVFTISFGFS-----ILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVYFTI- 73
           + FT S  FS     I ++WL+    + +F +T+A +   N T + T L  N  V  T+ 
Sbjct: 27  LFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHL-LNSSVQLTLF 86

Query: 74  -RNPNKQIGIYYDTIEATAMYKGQNFDTRL-LTPFYQGSRTTSLLKGRFEGQQVMVIPNN 133
            +NPNK++GIYYD +   A Y+GQ   +   L PFYQ     +LL    +G + + +  +
Sbjct: 87  SKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTE-LPVAQS 146

Query: 134 TVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGC 168
              +++ E+ +G   I +K    L+ K G +     R  V C
Sbjct: 147 FGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNC 186

[Close]

BLAST of PI0024080 vs. ExPASy TrEMBL
Match: A0A0A0LEQ7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.0e-89
Identity = 169/191 (88.48%), Postives = 179/191 (93.72%), Query Frame = 0


Query: 1   MARFLWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYN 60
           MAR +WCLLISVII F ISFG S+LILWL+FITNKIKFDVTDA LTQFNFTNNDTQLHYN
Sbjct: 1   MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 60

Query: 61  LGVYFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVM 120
           LGV+FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRF+GQ+V+
Sbjct: 61  LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 120

Query: 121 VIPNNTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSS 180
           VIPNNTVSEL SEKLSGVYSI+VKFRL  +LK GLYK IRVRPKVGCGFQ+PL SSGTSS
Sbjct: 121 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 180

Query: 181 FQNAIRCDVDY 192
           FQNAI CDVDY
Sbjct: 181 FQNAIGCDVDY 191

[Close]

BLAST of PI0024080 vs. ExPASy TrEMBL
Match: A0A5A7TR00 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001580 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.5e-88
Identity = 165/187 (88.24%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           LWC LIS+I+V  ISFG SILILWL+FITNKIKF+VTDATLTQFNFTNNDTQLHYNLGV+
Sbjct: 6   LWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGVF 65

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
           FTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRFEGQQV+VIPN
Sbjct: 66  FTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPN 125

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSSFQNA 184
           NTVSEL SEKLSGVYSIDV+FRL L+LKFGL+K IRVRPKVGCGFQ+PLNSSG SSFQNA
Sbjct: 126 NTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQNA 185

Query: 185 IRCDVDY 192
           I CDVDY
Sbjct: 186 IGCDVDY 192

[Close]

BLAST of PI0024080 vs. ExPASy TrEMBL
Match: A0A1S3B970 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.5e-88
Identity = 165/187 (88.24%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           LWC LIS+I+V  ISFG SILILWL+FITNKIKF+VTDATLTQFNFTNNDTQLHYNLGV+
Sbjct: 6   LWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGVF 65

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
           FTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRFEGQQV+VIPN
Sbjct: 66  FTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPN 125

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSSFQNA 184
           NTVSEL SEKLSGVYSIDV+FRL L+LKFGL+K IRVRPKVGCGFQ+PLNSSG SSFQNA
Sbjct: 126 NTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQNA 185

Query: 185 IRCDVDY 192
           I CDVDY
Sbjct: 186 IGCDVDY 192

[Close]

BLAST of PI0024080 vs. ExPASy TrEMBL
Match: A0A0A0LGS2 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.8e-79
Identity = 152/190 (80.00%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           LWCLLISVI+ F +SFGF++LILWL+FIT+KIKF+VTDATLTQFNFTNNDTQL YNLG+Y
Sbjct: 26  LWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGIY 85

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
           FTIRNPN+++GIYYDTIEATAMYK QNFDTRLLTPFYQ  +TTSLL+GRFEGQ+ +VI N
Sbjct: 86  FTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIGN 145

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSS---F 184
           N VSELNSEKL+GVYSIDVKFRL L+LKFG+YKIIRVRPKV CGFQ+PLN +GTSS   F
Sbjct: 146 NKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWF 205

Query: 185 QNAIRCDVDY 192
           Q+AI C VDY
Sbjct: 206 QDAIGCHVDY 215

[Close]

BLAST of PI0024080 vs. ExPASy TrEMBL
Match: A0A1S3B955 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.8e-78
Identity = 150/190 (78.95%), Postives = 170/190 (89.47%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           LWCLLISVI+ F  SFGF++LILWL+FIT+KIKF+VTDATLTQFNFTNNDTQL YNLG+Y
Sbjct: 4   LWCLLISVIVAFGASFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGIY 63

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
           FTIRNPN+++GIYYDTIEATAMYK QNFDTRLLTPFYQ  +TTSLL+GRFEGQ+ +VI N
Sbjct: 64  FTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIGN 123

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSS---F 184
           N VSEL SEKL+GVYS+DVKFRL L+LKFG+YKI+RVRPKV C FQ+PLNSSGTSS   F
Sbjct: 124 NKVSELKSEKLAGVYSVDVKFRLSLRLKFGIYKIVRVRPKVECRFQVPLNSSGTSSFPWF 183

Query: 185 QNAIRCDVDY 192
           Q AI C VDY
Sbjct: 184 QEAIGCHVDY 193

[Close]

BLAST of PI0024080 vs. NCBI nr
Match: XP_004136710.2 (uncharacterized protein LOC101218041 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88
Identity = 169/191 (88.48%), Postives = 179/191 (93.72%), Query Frame = 0


Query: 1   MARFLWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYN 60
           MAR +WCLLISVII F ISFG S+LILWL+FITNKIKFDVTDA LTQFNFTNNDTQLHYN
Sbjct: 211 MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 270

Query: 61  LGVYFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVM 120
           LGV+FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRF+GQ+V+
Sbjct: 271 LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 330

Query: 121 VIPNNTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSS 180
           VIPNNTVSEL SEKLSGVYSI+VKFRL  +LK GLYK IRVRPKVGCGFQ+PL SSGTSS
Sbjct: 331 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 390

Query: 181 FQNAIRCDVDY 192
           FQNAI CDVDY
Sbjct: 391 FQNAIGCDVDY 401

[Close]

BLAST of PI0024080 vs. NCBI nr
Match: XP_008443592.1 (PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043825.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 165/187 (88.24%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           LWC LIS+I+V  ISFG SILILWL+FITNKIKF+VTDATLTQFNFTNNDTQLHYNLGV+
Sbjct: 6   LWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGVF 65

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
           FTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRFEGQQV+VIPN
Sbjct: 66  FTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIPN 125

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSSFQNA 184
           NTVSEL SEKLSGVYSIDV+FRL L+LKFGL+K IRVRPKVGCGFQ+PLNSSG SSFQNA
Sbjct: 126 NTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQNA 185

Query: 185 IRCDVDY 192
           I CDVDY
Sbjct: 186 IGCDVDY 192

[Close]

BLAST of PI0024080 vs. NCBI nr
Match: KAE8651105.1 (hypothetical protein Csa_001204 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 4.1e-85
Identity = 164/185 (88.65%), Postives = 174/185 (94.05%), Query Frame = 0


Query: 1   MARFLWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYN 60
           MAR +WCLLISVII F ISFG S+LILWL+FITNKIKFDVTDA LTQFNFTNNDTQLHYN
Sbjct: 1   MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 60

Query: 61  LGVYFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVM 120
           LGV+FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRF+GQ+V+
Sbjct: 61  LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 120

Query: 121 VIPNNTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSS 180
           VIPNNTVSEL SEKLSGVYSI+VKFRL  +LK GLYK IRVRPKVGCGFQ+PL SSGTSS
Sbjct: 121 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 180

Query: 181 FQNAI 186
           FQNAI
Sbjct: 181 FQNAI 185

[Close]

BLAST of PI0024080 vs. NCBI nr
Match: XP_038904447.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 307.8 bits (787), Expect = 6.7e-80
Identity = 156/190 (82.11%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           LWCLL+ VII F +SFGFS+LILWL+FIT+KIKF+VTDATLTQFNFTNNDTQLHYNLGVY
Sbjct: 4   LWCLLMCVIIGFGVSFGFSVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLHYNLGVY 63

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
           FTIRNPN+Q+GIYYDTIEAT  YK QNF TRLLTPFYQ  +TTSLLKGRFEGQQ++VI N
Sbjct: 64  FTIRNPNEQVGIYYDTIEATTSYKDQNFHTRLLTPFYQTPKTTSLLKGRFEGQQLVVIAN 123

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSS---F 184
           N VSE N+EKL+GVYSIDVKFRL L+LKFGLYKIIRVRPKVGCGFQ+PLNSSGTSS   F
Sbjct: 124 NKVSEFNTEKLAGVYSIDVKFRLSLRLKFGLYKIIRVRPKVGCGFQLPLNSSGTSSFPWF 183

Query: 185 QNAIRCDVDY 192
           Q AI C VDY
Sbjct: 184 QTAIGCHVDY 193

[Close]

BLAST of PI0024080 vs. NCBI nr
Match: XP_004136708.1 (NDR1/HIN1-like protein 10 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 5.7e-79
Identity = 152/190 (80.00%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           LWCLLISVI+ F +SFGF++LILWL+FIT+KIKF+VTDATLTQFNFTNNDTQL YNLG+Y
Sbjct: 4   LWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGIY 63

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
           FTIRNPN+++GIYYDTIEATAMYK QNFDTRLLTPFYQ  +TTSLL+GRFEGQ+ +VI N
Sbjct: 64  FTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIGN 123

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSS---F 184
           N VSELNSEKL+GVYSIDVKFRL L+LKFG+YKIIRVRPKV CGFQ+PLN +GTSS   F
Sbjct: 124 NKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWF 183

Query: 185 QNAIRCDVDY 192
           Q+AI C VDY
Sbjct: 184 QDAIGCHVDY 193

[Close]

BLAST of PI0024080 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38
Identity = 85/191 (44.50%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 5   LWCLLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVY 64
           L  L + VII   +  G + LI WL+     IKF VTDA+LT+F+ T+ D  L YNL + 
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 124
             +RNPNK+IG+YYD IEA A Y+G+ F T  LTPFYQG + T++L   F+GQ +++   
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 125 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGC-GFQIPLNSSG---TSS 184
                LN+E++SGVY+I++KFRL ++ K G  K  R++PKV C   ++PL++S    T+S
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 216

Query: 185 FQNAIRCDVDY 192
               I+CD D+
Sbjct: 217 TVFPIKCDFDF 227

[Close]

BLAST of PI0024080 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 143.3 bits (360), Expect = 2.0e-34
Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 0


Query: 8   LLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNF--TNNDTQLHYNLGVYF 67
           ++ +++I   +  G + LI+WL+F  N IKF VTDA LT+F    TNN   L YNL + F
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNN---LRYNLDLNF 106

Query: 68  TIRNPNKQIGIYYDTIEATAMYKGQNFD-TRLLTPFYQGSRTTSLLKGRFEGQQVMVIPN 127
           TIRNPN++IG+YYD IE    Y  Q F  +  ++ FYQG + T+++  +  GQQ++++  
Sbjct: 107 TIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDG 166

Query: 128 NTVSELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLNSSGTSSFQ-N 187
               +LN +  S +Y ID K RL ++ KFGL K  R +PK+ C  ++PL S+ TS F   
Sbjct: 167 GERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQ 226

Query: 188 AIRCDVDY 192
             +CDVD+
Sbjct: 227 PTKCDVDF 231

[Close]

BLAST of PI0024080 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 132.9 bits (333), Expect = 2.8e-31
Identity = 71/187 (37.97%), Postives = 117/187 (62.57%), Query Frame = 0


Query: 8   LLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVYFTI 67
           L+ +++I   +  G + LILWL+F  N +KF V DA L +F+F  N+  LHY+L + FTI
Sbjct: 54  LICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLNFTI 113

Query: 68  RNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPNNTV 127
           RNPN+++G+YYD    +  Y  Q F +  ++ FYQG + T+++  + EGQ ++V+ +   
Sbjct: 114 RNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGAR 173

Query: 128 SELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGC-GFQIPL---NSSGTSSFQN 187
           ++L  ++ SG+Y I+ K RL ++ KF   K  +++PK+ C   +IPL   NS+G   FQ 
Sbjct: 174 TDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQ- 233

Query: 188 AIRCDVD 191
            ++CD D
Sbjct: 234 PVQCDFD 238

[Close]

BLAST of PI0024080 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30
Identity = 69/185 (37.30%), Postives = 107/185 (57.84%), Query Frame = 0


Query: 8   LLISVIIVFTISFGFSILILWLLFITNKIKFDVTDATLTQFNFTNNDTQLHYNLGVYFTI 67
           ++ +++I   +  G   LILW +   N +KF VT+A LT+F F      LHYN+ + F+I
Sbjct: 53  IICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSI 112

Query: 68  RNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPNNTV 127
           RNPN+++GI+YD +E    Y  Q F    +T FYQG + T+++     GQ+++++     
Sbjct: 113 RNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGR 172

Query: 128 SELNSEKLSGVYSIDVKFRLYLKLKFGLYKIIRVRPKVGCGFQIPLN-SSGTSSFQ-NAI 187
            +   ++ SGVY IDVK R  L+ KFG      VRPK+ C  ++PL+ SS    FQ +  
Sbjct: 173 RDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSSDERFQFHPT 232

Query: 188 RCDVD 191
           +C VD
Sbjct: 233 KCHVD 237

[Close]

BLAST of PI0024080 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 94.7 bits (234), Expect = 8.3e-20
Identity = 52/148 (35.14%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 33  TNKIKFDVTDATLTQFNFTNNDTQLHYNLGVYFTIRNPNKQIGIYYDTIEATAMYKGQNF 92
           +N +KF V DA LT F+  +N+  L Y+L +  +IRN    IGI+YD  EAT  Y  Q  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 93  DTRLLTPFYQGSRTTSLLKGRFEGQQVMVIPNNTVSELNSEKLSGVYSIDVKFRLYLKLK 152
               +  FY GS+ T LL+  FEGQ ++++  N   +   ++ +GVY IDVK  +  ++ 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 153 FGLYKIIRVRPKVGCGFQIPLNSSGTSS 181
                   ++P V C  +IPL    ++S
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

The following BLAST results are available for this feature:

BLAST of PI0024080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ52	3.3e-37	44.50	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	2.9e-33	41.49	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	3.9e-30	37.97	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	1.2e-18	35.14	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q9FI03	2.9e-09	30.25	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of PI0024080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEQ7	5.0e-89	88.48	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 ...	[more]
A0A5A7TR00	5.5e-88	88.24	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00...	[more]
A0A1S3B970	5.5e-88	88.24	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1	[more]
A0A0A0LGS2	2.8e-79	80.00	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 ...	[more]
A0A1S3B955	6.8e-78	78.95	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1	[more]

BLAST of PI0024080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136710.2	1.0e-88	88.48	uncharacterized protein LOC101218041 [Cucumis sativus]	[more]
XP_008443592.1	1.1e-87	88.24	PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043825.1 protein YLS9-like [Cuc...	[more]
KAE8651105.1	4.1e-85	88.65	hypothetical protein Csa_001204 [Cucumis sativus]	[more]
XP_038904447.1	6.7e-80	82.11	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
XP_004136708.1	5.7e-79	80.00	NDR1/HIN1-like protein 10 [Cucumis sativus]	[more]

BLAST of PI0024080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35980.1	2.3e-38	44.50	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	2.0e-34	41.49	NDR1/HIN1-like 3	[more]
AT3G11650.1	2.8e-31	37.97	NDR1/HIN1-like 2	[more]
AT2G35460.1	1.8e-30	37.30	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	8.3e-20	35.14	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 65..162 e-value: 7.9E-11 score: 42.4
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 4..189
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 4..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024080.1	PI0024080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane