PI0024073 (gene) Melon (PI 482460) v1

Overview


Name	PI0024073
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr12: 1393872 .. 1394347 (+)
RNA-Seq Expression	PI0024073
Synteny	PI0024073

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAGGGAAATTGTAAAAATGGCAAGACTAATGAGAGAAATTAGCAGTCAAAATGGAAGCTTTGGGCTCGCCGGCAGTGAGATTTATTGGTTGTTTTGGGTGGCTCTGTTTACACTCTGCATAATTTCCACTATAATTTTCTCTTGCTCCGATGGCATGTCAAAAGACCGGAATTCCACGGTGGACGTTGAGCTTTACGGCGGCGGTTGCGCCGCTGGGTGCGGCGCTGGATGTGGTGCTTGAAAAATAGTGAACCCTCTTCTTCTTCTTTTCATCTATAGGAAACAAATTATGTTTTGGATTTTTAAAGCCATGAGAGAAACAGAGAGAGCTTGTTTCGAAGATACTGACATCAATTTTGTTACATTTTATTTGTGATTTAGCAGGCTTGAGTTTAGTACTTTTCTTTTCTTTTCTTTTTTTTCTTAATTAAAAATGATTATAATGTTAATACAAATTGTTAGAGGTTCT

mRNA sequence

AAAAAGAAAGGGAAATTGTAAAAATGGCAAGACTAATGAGAGAAATTAGCAGTCAAAATGGAAGCTTTGGGCTCGCCGGCAGTGAGATTTATTGGTTGTTTTGGGTGGCTCTGTTTACACTCTGCATAATTTCCACTATAATTTTCTCTTGCTCCGATGGCATGTCAAAAGACCGGAATTCCACGGTGGACGTTGAGCTTTACGGCGGCGGTTGCGCCGCTGGGTGCGGCGCTGGATGTGGTGCTTGAAAAATAGTGAACCCTCTTCTTCTTCTTTTCATCTATAGGAAACAAATTATGTTTTGGATTTTTAAAGCCATGAGAGAAACAGAGAGAGCTTGTTTCGAAGATACTGACATCAATTTTGTTACATTTTATTTGTGATTTAGCAGGCTTGAGTTTAGTACTTTTCTTTTCTTTTCTTTTTTTTCTTAATTAAAAATGATTATAATGTTAATACAAATTGTTAGAGGTTCT

Coding sequence (CDS)

ATGGCAAGACTAATGAGAGAAATTAGCAGTCAAAATGGAAGCTTTGGGCTCGCCGGCAGTGAGATTTATTGGTTGTTTTGGGTGGCTCTGTTTACACTCTGCATAATTTCCACTATAATTTTCTCTTGCTCCGATGGCATGTCAAAAGACCGGAATTCCACGGTGGACGTTGAGCTTTACGGCGGCGGTTGCGCCGCTGGGTGCGGCGCTGGATGTGGTGCTTGA

Protein sequence

MARLMREISSQNGSFGLAGSEIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCGA

Homology

[Close]

BLAST of PI0024073 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-32
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 1  MARLMREISSQNGSFGLAGSEIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELY 60
          MARLMREISSQNGSFGLAG E YWLFWVALFTLCIIST+IFSCSDGMSKDRNSTVDVELY
Sbjct: 1  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTLIFSCSDGMSKDRNSTVDVELY 60

Query: 61 GGGCAAGCGAGCGA 75
          GGGCAAGCGAGCGA
Sbjct: 61 GGGCAAGCGAGCGA 74

[Close]

BLAST of PI0024073 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-15
Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 1  MARLMREISSQNGSFGLAGSEIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELY 60
          M RL R+++S +GS    GS  + + W+AL  +CIIS IIFSC+DG+SK++ ST D ELY
Sbjct: 1  MVRLWRDLASVHGS----GSAGFVVLWLALLGVCIISAIIFSCADGVSKEKTSTADTELY 60

Query: 61 GGGCAAGCGAGCGA 75
          GGGCAAGCGAGCGA
Sbjct: 61 GGGCAAGCGAGCGA 70

[Close]

BLAST of PI0024073 vs. ExPASy TrEMBL
Match: A0A2P5AQX4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.5e-14
Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 1  MARLMREISSQNGSFGLAGSEIYWLFWVALF-TLCIISTIIFSCSDGMSKDRNSTVDVEL 60
          M RL RE +  +G  G + S  + +F++ L  TLCI+STIIFSC+DG+SK++ S  D EL
Sbjct: 1  MVRLWREAAGVDGGVGSSHSGTFLVFFLGLLVTLCILSTIIFSCTDGVSKEKTSQADTEL 60

Query: 61 YGGGCAAGCGAGCG 74
          YGGGCAAGCGAGCG
Sbjct: 61 YGGGCAAGCGAGCG 74

[Close]

BLAST of PI0024073 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.6e-14
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 1  MARLMREISSQNGSFGLAGSEIYWLFWVA-LFTLCIISTIIFSCSDGMSKDRNSTVDVEL 60
          M RL RE+++ +G  G  GS  + +F +  L TLCI+STIIFSC+DG+SK++ S  D EL
Sbjct: 1  MVRLWREVANVDGGVG-TGSGAFLIFLLGFLVTLCILSTIIFSCADGVSKEKTSQGDTEL 60

Query: 61 YGGGCAAGCGAGCGA 75
          YGGGCAAGCGAGCGA
Sbjct: 61 YGGGCAAGCGAGCGA 74

[Close]

BLAST of PI0024073 vs. ExPASy TrEMBL
Match: A0A803R004 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.6e-14
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 1  MARLMREISSQNGSFGLAGSEIYWLFWVA-LFTLCIISTIIFSCSDGMSKDRNSTVDVEL 60
          M RL RE+++ +G  G  GS  + +F +  L TLCI+STIIFSC+DG+SK++ S  D EL
Sbjct: 1  MVRLWREVANVDGGVG-TGSGAFLIFLLGFLVTLCILSTIIFSCADGVSKEKTSQGDTEL 60

Query: 61 YGGGCAAGCGAGCGA 75
          YGGGCAAGCGAGCGA
Sbjct: 61 YGGGCAAGCGAGCGA 74

[Close]

BLAST of PI0024073 vs. NCBI nr
Match: KAE8652552.1 (hypothetical protein Csa_013579 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 4.5e-32
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 1   MARLMREISSQNGSFGLAGSEIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELY 60
           MARLMREISSQNGSFGLAG E YWLFWVALFTLCIIST+IFSCSDGMSKDRNSTVDVELY
Sbjct: 29  MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTLIFSCSDGMSKDRNSTVDVELY 88

Query: 61  GGGCAAGCGAGCGA 75
           GGGCAAGCGAGCGA
Sbjct: 89  GGGCAAGCGAGCGA 102

[Close]

BLAST of PI0024073 vs. NCBI nr
Match: KAG6584341.1 (hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 66/75 (88.00%), Postives = 67/75 (89.33%), Query Frame = 0


Query: 1  MARLMREISSQNGSFGLAGSEIYWLFWVALFTLCIISTIIFSCSDGMS-KDRNSTVDVEL 60
          MARLMRE  SQNGSFGLAG +IY LFW ALFTLCIISTIIFSCSDGMS KDRNST DVEL
Sbjct: 1  MARLMREFGSQNGSFGLAG-DIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVEL 60

Query: 61 YGGGCAAGCGAGCGA 75
          YG GCAAGCGAGCGA
Sbjct: 61 YGAGCAAGCGAGCGA 74

[Close]

BLAST of PI0024073 vs. NCBI nr
Match: KAG6572949.1 (hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 101.3 bits (251), Expect = 3.7e-18
Identity = 53/70 (75.71%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1  MARLMREISSQNGSFGLAGSEIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELY 60
          MARL+ EI S +GSFGL+G +I  LF  ALFTLCIIS I FSCSDG+SK+RNST DVELY
Sbjct: 1  MARLIGEIGSVDGSFGLSG-DISCLFLAALFTLCIISLITFSCSDGISKERNSTADVELY 60

Query: 61 GGGCAAGCGA 71
          GGGCAAGCGA
Sbjct: 61 GGGCAAGCGA 69

[Close]

BLAST of PI0024073 vs. NCBI nr
Match: XP_015882794.1 (uncharacterized protein LOC107418606 [Ziziphus jujuba])

HSP 1 Score: 91.3 bits (225), Expect = 3.8e-15
Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 1  MARLMREISSQNGSFGLAGSEIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELY 60
          M RL R+++S +GS    GS  + + W+AL  +CIIS IIFSC+DG+SK++ ST D ELY
Sbjct: 1  MVRLWRDLASVHGS----GSAGFVVLWLALLGVCIISAIIFSCADGVSKEKTSTADTELY 60

Query: 61 GGGCAAGCGAGCGA 75
          GGGCAAGCGAGCGA
Sbjct: 61 GGGCAAGCGAGCGA 70

[Close]

BLAST of PI0024073 vs. NCBI nr
Match: KAF3438595.1 (hypothetical protein FNV43_RR21358 [Rhamnella rubrinervis])

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-14
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 5  MREISSQNGSFGLAGSEIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELYGGGC 64
          M  +SS +GS   AG  +Y   W+AL ++CI+S IIFSC+DG+SK++ ST D ELYGGGC
Sbjct: 1  MVRLSSVDGSSSYAGFLVY--LWLALLSVCILSAIIFSCTDGVSKEKTSTADTELYGGGC 60

Query: 65 AAGCGAGCGA 75
          AAGCGAGCGA
Sbjct: 61 AAGCGAGCGA 68

[Close]

BLAST of PI0024073 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein )

HSP 1 Score: 45.8 bits (107), Expect = 1.7e-05
Identity = 24/55 (43.64%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 20 SEIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELYGGGC-AAGCGAGCG 74
          S ++ + ++A+   CI+S ++FSC+DG+S D  +T      GGGC  AGCG GCG
Sbjct: 22 SYLFHVVFLAVIGCCILSALLFSCADGVS-DNRATSGTSTGGGGCGGAGCGGGCG 75

[Close]

BLAST of PI0024073 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 6.5e-05
Identity = 22/53 (41.51%), Postives = 30/53 (56.60%), Query Frame = 0


Query: 21 EIYWLFWVALFTLCIISTIIFSCSDGMSKDRNSTVDVELYGGGCAAGCGAGCG 74
          E+    W A+    +I+ +IFSCSD  SK   +    ++ G  CAAGCG GCG
Sbjct: 15 EVSLYIWAAVVAFSVIAAVIFSCSDRASKPHTND---DVNGSSCAAGCGGGCG 64

The following BLAST results are available for this feature:

BLAST of PI0024073 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQU7	2.2e-32	95.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1	[more]
A0A6P3ZT85	1.9e-15	60.81	uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC10741860...	[more]
A0A2P5AQX4	3.5e-14	58.11	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE...	[more]
A0A803R005	4.6e-14	60.00	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803R004	4.6e-14	60.00	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of PI0024073 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652552.1	4.5e-32	95.95	hypothetical protein Csa_013579 [Cucumis sativus]	[more]
KAG6584341.1	1.1e-25	88.00	hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6572949.1	3.7e-18	75.71	hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_015882794.1	3.8e-15	60.81	uncharacterized protein LOC107418606 [Ziziphus jujuba]	[more]
KAF3438595.1	1.9e-14	61.43	hypothetical protein FNV43_RR21358 [Rhamnella rubrinervis]	[more]

BLAST of PI0024073 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18250.1	1.7e-05	43.64	Putative membrane lipoprotein	[more]
AT1G68238.1	6.5e-05	41.51	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37199	TRANSMEMBRANE PROTEIN	coord: 1..74
None	No IPR available	PANTHER	PTHR37199:SF2	MEMBRANE LIPOPROTEIN-RELATED	coord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024073.1	PI0024073.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane