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PI0024016 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTCATAATTAAAGGAAGAAAAAAAACCTCCGCACATTGAGATCGGAAAAACATCGGCCCAAACTGCCGCCGTAAACTTCCTCCAGTTCGGACCCAAAAGCCCTAACCGTCCATTTTCCCCTCTACGATTATCAACGACGACGGTCTGAGCTTCTCTCCGCCGTCGCCATCTCCTTCTAAGGATTTGAATCTCGTATCTTCGCTATCTCTTAGTGCCCCTGATAGAGACGGAGTTCAAAATTGGGGTCAAATATGGAGGGAGGTGTTCGAGATTTCGCTGTTGTGCCGGAGAAAGTGATGGATTCAGTGAAGACGACATTGGACAATGTAGAACAAGTCCAAACTCACCTTATTTCCTTCCTGTCTATCGCCGAGCCTGAAGTCCTTGCTCAAATGCAGCCTCTCCAACGGGCTCAGTCTACGCTTTTGCTTGCTAGAGTCACTACCACTCTCTTCGCATGTAAAATTTCGTTGATTACGAATAGTTCTTTATTATTAACTTTTTGTTGTTGTTTATTTTGTATTATTGAGGTGAAGTTTTTGTTTGTTTTTGGTGTAATTTGCAGTGAAGTTGAGGTGTAGCGGAGTTCATCTTGATGATCATCCTATCAAATCAGAGCTTGTAATTATTCTCATACCTTGTATCTGGTGATTAAAGCTGAAATTTGCTCACATGGGTTATCATGTTATTCTCTTATTATTGTTCAAATGTTCATTCTTATTTTTTGTTATGCATGTAGGAGAGATTAAGCTTATATCAAGACAAACTAGAACGGTTCATAGGCTTGAGTAAAGGTATGTTTGACCTCTGATTTTTTTGAGTTTATTTCACCATCGTTTCCTTTTTTTTTTTTTTTTTTTTGCTCCTTTCATGCTAGATTGTTAATTTTGCATTTCATTTTGTTCATGAAGCGCCATTGAAGCGTTCTACTACCTTGAACTATCAAGCAGCTACTCGCTTTATTGAACATTCTCTGCCTGATCTAACTCAAGGTTGGTTGAATTTGTTTGCTTTTTTTTTTTTTATTTTTTTATTACTTTTTTTTTTGGGGGGGGGGGGGGAGGTCTGTGTCTGATTCCCTTCGATCAAGTAAATATTTCAATATTTTTCAGAGCAAAAGCTGAGTATGAGGGATATCAGTAGAGGAAAGGGGCAAAAAATGAAGCAATTAGAGAGGAACGTACAGAAGAAGAGGAAGTATCAGTCTTCTGAAAAACAATCTGTTCAAACTGCTGCTAAGGAATTTCTTGAGAAAGCAGCGCGTGAGCTTCTTGGTGATAGTAATGGAGGTTTACAGGGTCCATTGTGTGGAGATGCTTTAGATGACGATGCCCTGCAGGAGGACTGAATCCTGGATTTCACTTTGGTATCTGCTTATCACATTTATTTCTAATTTTGTCGTCCTTTTTTGATAAATGCAAGCTTTTCCACATGCTTGTTGACGGAATGAATTTTGATTTTCTTAATAAATTTTTCATTTTAGTTCTATTGCTCATTCTTGTAACACTGATTGTCGTTAGCTTGCTTAGCTTAATGGAATTGAGTTTGAAATTTAGAATTGTAGTCTGTTTATGGACGTCTTTGATGTGTTTGACATCGTGATATGTATGTATATCACGTTCTTTTTGTCATAGTTTATCAAAGGCTTGTCTAGATTAGCTTTCTTAGTGCTTAAAACCTTTAAAACACTTTTATAAACACTTAAAAAAGGCAGTCCAGACACCCTCTAAGCATTATTTTAGTGAAGTTTCAATTGCAATGAATATAGTTTTTCTTCTGTTGAACAGTTGAACTGCCTCCCCTTCCCTCAGCAAACTGAATGCCATAAATTAAACTAAAATGATTTTTATTCATTCCATGCAAACAAATCTAATACTTCCCTTCATATATTCACATTTATTTGCCATGTATTCCTCTATGTTTTAACAATTCCTCACCTTTACATCTTTCAGGAGTATGAAAACCAGGTTCCCTTGTGCCCTTAATTATCCCAACTCTCGAAGAATTGGTCCATTTTGAAGTTGGATTTGGACGTCTGTTTTTCCCTTTTTTCCCCTTCTCCTAGTTTCTCCTTAGGACATTAAATCGTTTTCCCTTTACTCTGTTTAGAAGTCTTTATATACATATGTGCATTTTGGAGTTTCAATCCCATCATAAGTTACTATTAGGACACTATTTGGTTGGAATTTTGGCACTCTACTCTTTCTCATGGGCTGATCTTCCTGGTTTTTTGTTTTCTTAATAGTGTGATCATATGAACAAGACACGATCTTGATCAAAGGAGTCTGTGCCTTTTACATGTAAAGTAGCCTACTTTGGTAGCTGACTTTCTAGTGTTTGTTAGGTCTGTATATCAGTCATCATCTTGTTACTTGAATTAGCCTTTTTTGCCATAAATTAATAATAGTATGTTCATTTTGATACCGCAA GTTTTCATAATTAAAGGAAGAAAAAAAACCTCCGCACATTGAGATCGGAAAAACATCGGCCCAAACTGCCGCCGTAAACTTCCTCCAGTTCGGACCCAAAAGCCCTAACCGTCCATTTTCCCCTCTACGATTATCAACGACGACGGTCTGAGCTTCTCTCCGCCGTCGCCATCTCCTTCTAAGGATTTGAATCTCGTATCTTCGCTATCTCTTAGTGCCCCTGATAGAGACGGAGTTCAAAATTGGGGTCAAATATGGAGGGAGGTGTTCGAGATTTCGCTGTTGTGCCGGAGAAAGTGATGGATTCAGTGAAGACGACATTGGACAATGTAGAACAAGTCCAAACTCACCTTATTTCCTTCCTGTCTATCGCCGAGCCTGAAGTCCTTGCTCAAATGCAGCCTCTCCAACGGGCTCAGTCTACGCTTTTGCTTGCTAGAGTCACTACCACTCTCTTCGCATTGAAGTTGAGGTGTAGCGGAGTTCATCTTGATGATCATCCTATCAAATCAGAGCTTGAGAGATTAAGCTTATATCAAGACAAACTAGAACGGTTCATAGGCTTGAGTAAAGCGCCATTGAAGCGTTCTACTACCTTGAACTATCAAGCAGCTACTCGCTTTATTGAACATTCTCTGCCTGATCTAACTCAAGAGCAAAAGCTGAGTATGAGGGATATCAGTAGAGGAAAGGGGCAAAAAATGAAGCAATTAGAGAGGAACGTACAGAAGAAGAGGAAGTATCAGTCTTCTGAAAAACAATCTGTTCAAACTGCTGCTAAGGAATTTCTTGAGAAAGCAGCGCGTGAGCTTCTTGGTGATAGTAATGGAGGTTTACAGGGTCCATTGTGTGGAGATGCTTTAGATGACGATGCCCTGCAGGAGGACTGAATCCTGGATTTCACTTTGGAGTATGAAAACCAGGTTCCCTTGTGCCCTTAATTATCCCAACTCTCGAAGAATTGGTCCATTTTGAAGTTGGATTTGGACGTCTGTTTTTCCCTTTTTTCCCCTTCTCCTAGTTTCTCCTTAGGACATTAAATCGTTTTCCCTTTACTCTGTTTAGAAGTCTTTATATACATATGTGCATTTTGGAGTTTCAATCCCATCATAAGTTACTATTAGGACACTATTTGGTTGGAATTTTGGCACTCTACTCTTTCTCATGGGCTGATCTTCCTGGTTTTTTGTTTTCTTAATAGTGTGATCATATGAACAAGACACGATCTTGATCAAAGGAGTCTGTGCCTTTTACATGTAAAGTAGCCTACTTTGGTAGCTGACTTTCTAGTGTTTGTTAGGTCTGTATATCAGTCATCATCTTGTTACTTGAATTAGCCTTTTTTGCCATAAATTAATAATAGTATGTTCATTTTGATACCGCAA ATGGAGGGAGGTGTTCGAGATTTCGCTGTTGTGCCGGAGAAAGTGATGGATTCAGTGAAGACGACATTGGACAATGTAGAACAAGTCCAAACTCACCTTATTTCCTTCCTGTCTATCGCCGAGCCTGAAGTCCTTGCTCAAATGCAGCCTCTCCAACGGGCTCAGTCTACGCTTTTGCTTGCTAGAGTCACTACCACTCTCTTCGCATTGAAGTTGAGGTGTAGCGGAGTTCATCTTGATGATCATCCTATCAAATCAGAGCTTGAGAGATTAAGCTTATATCAAGACAAACTAGAACGGTTCATAGGCTTGAGTAAAGCGCCATTGAAGCGTTCTACTACCTTGAACTATCAAGCAGCTACTCGCTTTATTGAACATTCTCTGCCTGATCTAACTCAAGAGCAAAAGCTGAGTATGAGGGATATCAGTAGAGGAAAGGGGCAAAAAATGAAGCAATTAGAGAGGAACGTACAGAAGAAGAGGAAGTATCAGTCTTCTGAAAAACAATCTGTTCAAACTGCTGCTAAGGAATTTCTTGAGAAAGCAGCGCGTGAGCTTCTTGGTGATAGTAATGGAGGTTTACAGGGTCCATTGTGTGGAGATGCTTTAGATGACGATGCCCTGCAGGAGGACTGA MEGGVRDFAVVPEKVMDSVKTTLDNVEQVQTHLISFLSIAEPEVLAQMQPLQRAQSTLLLARVTTTLFALKLRCSGVHLDDHPIKSELERLSLYQDKLERFIGLSKAPLKRSTTLNYQAATRFIEHSLPDLTQEQKLSMRDISRGKGQKMKQLERNVQKKRKYQSSEKQSVQTAAKEFLEKAARELLGDSNGGLQGPLCGDALDDDALQED Homology
BLAST of PI0024016 vs. ExPASy Swiss-Prot
Match: Q3KPR1 (Nuclear nucleic acid-binding protein C1D OS=Xenopus laevis OX=8355 GN=c1d PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 9.3e-09 Identity = 36/124 (29.03%), Postives = 70/124 (56.45%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy Swiss-Prot
Match: Q5ZHS3 (Nuclear nucleic acid-binding protein C1D OS=Gallus gallus OX=9031 GN=C1D PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08 Identity = 33/117 (28.21%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy Swiss-Prot
Match: Q5XJ97 (Nuclear nucleic acid-binding protein C1D OS=Danio rerio OX=7955 GN=c1d PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.5e-08 Identity = 36/135 (26.67%), Postives = 74/135 (54.81%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy Swiss-Prot
Match: Q32PE4 (Nuclear nucleic acid-binding protein C1D OS=Bos taurus OX=9913 GN=C1D PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.9e-07 Identity = 31/117 (26.50%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy Swiss-Prot
Match: Q7TSU0 (Nuclear nucleic acid-binding protein C1D OS=Cricetulus griseus OX=10029 GN=C1D PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.9e-07 Identity = 33/135 (24.44%), Postives = 76/135 (56.30%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy TrEMBL
Match: A0A0A0L118 (Nuclear nucleic acid-binding protein C1D OS=Cucumis sativus OX=3659 GN=Csa_4G651890 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.9e-105 Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy TrEMBL
Match: A0A5D3D8Y3 (Nuclear nucleic acid-binding protein C1D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001320 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 6.1e-104 Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy TrEMBL
Match: A0A1S3BUS6 (Nuclear nucleic acid-binding protein C1D OS=Cucumis melo OX=3656 GN=LOC103493742 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 6.1e-104 Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy TrEMBL
Match: A0A6J1FIR0 (Nuclear nucleic acid-binding protein C1D OS=Cucurbita moschata OX=3662 GN=LOC111445751 PE=3 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.4e-94 Identity = 191/211 (90.52%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of PI0024016 vs. ExPASy TrEMBL
Match: A0A6J1F700 (Nuclear nucleic acid-binding protein C1D OS=Cucurbita moschata OX=3662 GN=LOC111442695 PE=3 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 2.8e-93 Identity = 190/210 (90.48%), Postives = 198/210 (94.29%), Query Frame = 0
BLAST of PI0024016 vs. NCBI nr
Match: XP_004145496.1 (nuclear nucleic acid-binding protein C1D [Cucumis sativus] >KGN55423.1 hypothetical protein Csa_012234 [Cucumis sativus]) HSP 1 Score: 391.7 bits (1005), Expect = 3.9e-105 Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of PI0024016 vs. NCBI nr
Match: XP_008452844.1 (PREDICTED: nuclear nucleic acid-binding protein C1D [Cucumis melo] >KAA0064576.1 nuclear nucleic acid-binding protein C1D [Cucumis melo var. makuwa] >TYK20014.1 nuclear nucleic acid-binding protein C1D [Cucumis melo var. makuwa]) HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103 Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0
BLAST of PI0024016 vs. NCBI nr
Match: XP_038897508.1 (nuclear nucleic acid-binding protein C1D [Benincasa hispida]) HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99 Identity = 202/211 (95.73%), Postives = 204/211 (96.68%), Query Frame = 0
BLAST of PI0024016 vs. NCBI nr
Match: XP_022939979.1 (nuclear nucleic acid-binding protein C1D-like [Cucurbita moschata] >XP_022939980.1 nuclear nucleic acid-binding protein C1D-like [Cucurbita moschata]) HSP 1 Score: 354.4 bits (908), Expect = 6.9e-94 Identity = 191/211 (90.52%), Postives = 199/211 (94.31%), Query Frame = 0
BLAST of PI0024016 vs. NCBI nr
Match: KAG7024413.1 (Nuclear nucleic acid-binding protein C1D [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 352.4 bits (903), Expect = 2.6e-93 Identity = 191/210 (90.95%), Postives = 198/210 (94.29%), Query Frame = 0
BLAST of PI0024016 vs. TAIR 10
Match: AT5G25080.1 (Sas10/Utp3/C1D family ) HSP 1 Score: 200.3 bits (508), Expect = 1.6e-51 Identity = 108/198 (54.55%), Postives = 151/198 (76.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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