PI0024012 (gene) Melon (PI 482460) v1

Overview


Name	PI0024012
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gibberellin regulated protein
Location	chr04: 9899420 .. 9900907 (+)
RNA-Seq Expression	PI0024012
Synteny	PI0024012

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCACTCTCTCCCTCACTCTCTCTCACTCTCTCTCTCACTCTCTTATATATATAATTTAGTTTGAAATAATGGGAAGGAAGCAAATAATAGAGATGTTGTTTGTAGTAATGTTGCTGAATTGTGTTCTCTTAGTACACAATCAGGTAACCTAACCTTTCTCCTAACTCCATTTTTACTTTATTTAACTTCTTACTACCAATTATTTAAGGGTTTTTCTTTCTTTTTTTGTACATATATGAATGGTTTTGGTTTGGTTTATTGTGTTTTATAGGCCATTAGTGAGGCTCCAACACCACAGCCACAGACTGGTGCCAATTATTCCAATCCCATGGTAATTTTCCCTTTTTTTTTCTTTTTTTTTTTGGAAAATAATTAATTACATTGTGAATCCATCAATTGATTGTCTTTTTTAAAAAAAAAAAAAAATTGGAAATTAATGTGTGTAATTTTTTTTCCATTTTTTTTTCCAAATCTCAGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGGTAAAAACTAATGAAAGGATTTTTCATGTGGTCAATTATTTTAGCCTCTCCTTTGCTAAGTATTTGGTTTTTATTTTTTAAAATTAATCTTGTAGACTATATTTTCACCACTAAGATTCTTTTGATAATTATTTGGGTTTTTTTTTTTTTTTTTTTTTGAAGATTAAGTTTATCTTCTTTCAAGTTCTCTTTCTTAAGTAAAATAGTTGAATCAAATTTCGTAAACAAATTTCGTAAATATAAAAATCTACATTTGGCTTGATTTTGAAAACATTAATAAAAGGTAAATAACAAAGCAATAAAACTAAAGGTGGTCGAAGATGTGTTTATAAGCTTAAATTTTCAAAAACTAAAAAGCAAAAACTAATACTCCTTTTGTTAACCATTTGATTTTTTATTTGTAGTTTTTAAAAATTAAGAGCCTATAAAAACATCTCTAATCTTCCACTTTTAAATTTCTTAATTTGTTATTTAGTTTTTCTCAATGTTTTCAAAAACCAACTCGAAGTTGTAAAACTTGAAAAGAAATATAGTTTTTTAGAAATTATGTTCGATTCTTTTTGGAATTGGTTCGTAATAAATCAATTTTAGTGTTAATTGAGTTGAGGGGGGGGGATGCAGAATGTGGGCCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGAAGCCATGCATGTTCTTTTGTCAAAAGTGTTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTATGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTAATTTTCATTTTCGTTATATTTCATTTCCCAACCCCCAAACAAAAAAACCATTATTAATTTATTCTGAATGTCTATTCTTTCGTTGTACTTTTAAAAAGGGATGGTTTTGGCCTTTCATGAAGGGTAACATCTTAAAAGGTATATTATATGGAAGGGTTTTTGT

mRNA sequence

TCTCTCTCTCTCTCACTCTCTCCCTCACTCTCTCTCACTCTCTCTCTCACTCTCTTATATATATAATTTAGTTTGAAATAATGGGAAGGAAGCAAATAATAGAGATGTTGTTTGTAGTAATGTTGCTGAATTGTGTTCTCTTAGTACACAATCAGGCCATTAGTGAGGCTCCAACACCACAGCCACAGACTGGTGCCAATTATTCCAATCCCATGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGAATGTGGGCCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGAAGCCATGCATGTTCTTTTGTCAAAAGTGTTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTATGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTAATTTTCATTTTCGTTATATTTCATTTCCCAACCCCCAAACAAAAAAACCATTATTAATTTATTCTGAATGTCTATTCTTTCGTTGTACTTTTAAAAAGGGATGGTTTTGGCCTTTCATGAAGGGTAACATCTTAAAAGGTATATTATATGGAAGGGTTTTTGT

Coding sequence (CDS)

ATGGGAAGGAAGCAAATAATAGAGATGTTGTTTGTAGTAATGTTGCTGAATTGTGTTCTCTTAGTACACAATCAGGCCATTAGTGAGGCTCCAACACCACAGCCACAGACTGGTGCCAATTATTCCAATCCCATGCATGGAGTTACTGAAGGCAGCCTTCAACCTCAAGAATGTGGGCCTAGATGCACAGGGAGATGTTCAAAGACAGCATTCAAGAAGCCATGCATGTTCTTTTGTCAAAAGTGTTGTGCCAAATGCTTGTGTGTTCCTTATGGGACTTATGGCAACAAACAAACTTGTCCTTGCTACAATCAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTAA

Protein sequence

MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP

Homology

[Close]

BLAST of PI0024012 vs. ExPASy Swiss-Prot
Match: P27057 (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-35
Identity = 67/109 (61.47%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 8   EMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCS 67
           +M  V+ +L  V L  NQ          Q     +N ++GV+EG L PQ+C P+CT RCS
Sbjct: 4   KMSIVLFVLLVVFLTQNQVSRANIMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTYRCS 63

Query: 68  KTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           KT++KKPCMFFCQKCCAKCLCVP GTYGNKQ+CPCYN WKTKRGGPKCP
Sbjct: 64  KTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112

[Close]

BLAST of PI0024012 vs. ExPASy Swiss-Prot
Match: Q6NMQ7 (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-27
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 51  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKR 110
           GSL+  +CG +CT RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++
Sbjct: 36  GSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQ 95

Query: 111 GGPKCP 117
           GGPKCP
Sbjct: 96  GGPKCP 101

[Close]

BLAST of PI0024012 vs. ExPASy Swiss-Prot
Match: P47926 (Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-26
Identity = 51/76 (67.11%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 41  YSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTC 100
           +SN + G  +  L+P +C PRCT RCS T+ KKPCMFFCQKCCA CLCVP G YGNKQ+C
Sbjct: 23  FSNVVEGYNK--LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSC 82

Query: 101 PCYNQWKTKRGGPKCP 117
           PCYN WKT+ G PKCP
Sbjct: 83  PCYNNWKTQEGKPKCP 96

[Close]

BLAST of PI0024012 vs. ExPASy Swiss-Prot
Match: A8MR46 (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-26
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 49  TEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWK 108
           T+ ++ P  ECGPRC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WK
Sbjct: 35  TKSAIPPLLECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWK 94

Query: 109 TKRGGPKCP 117
           TK GGPKCP
Sbjct: 95  TKSGGPKCP 103

[Close]

BLAST of PI0024012 vs. ExPASy Swiss-Prot
Match: Q84J95 (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.6e-26
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 51  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKR 110
           G L+PQ+C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQTCPCYN WKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 111 GGPKCP 117
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of PI0024012 vs. ExPASy TrEMBL
Match: A0A1S3CMR4 (protein GAST1-like OS=Cucumis melo OX=3656 GN=LOC103502695 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 1   MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECG 60
           MGRKQIIE +LFVVMLLNCVLL HNQAISEAPTPQPQT ANYSNPMHGVTEGSLQPQECG
Sbjct: 1   MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECG 60

Query: 61  PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
Sbjct: 61  PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117

[Close]

BLAST of PI0024012 vs. ExPASy TrEMBL
Match: A0A0A0LI43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G841990 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.9e-55
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 14  MLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKK 73
           MLLNCVLLVHN AISEAPTPQPQT +NYSNPMHGVTEGSLQPQECG RCTGRCSKTAFKK
Sbjct: 1   MLLNCVLLVHNLAISEAPTPQPQTSSNYSNPMHGVTEGSLQPQECGARCTGRCSKTAFKK 60

Query: 74  PCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           PCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
Sbjct: 61  PCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 103

[Close]

BLAST of PI0024012 vs. ExPASy TrEMBL
Match: A0A6J1J049 (protein GAST1-like OS=Cucurbita maxima OX=3661 GN=LOC111480028 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52
Identity = 95/118 (80.51%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTG--ANYSNPMHGVTEGSLQPQEC 60
           M RKQ+ EM F VML NC+LL  N +ISEAPTPQPQ+G  +NY +PMHGVTEGSL+P+EC
Sbjct: 1   MARKQVTEMFFAVMLFNCLLLAQNHSISEAPTPQPQSGGSSNYPDPMHGVTEGSLEPEEC 60

Query: 61  GPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           G RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYN+WKTKRGGPKCP
Sbjct: 61  GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 118

[Close]

BLAST of PI0024012 vs. ExPASy TrEMBL
Match: A0A6J1EQZ6 (protein GAST1-like OS=Cucurbita moschata OX=3662 GN=LOC111436994 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50
Identity = 92/117 (78.63%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQT-GANYSNPMHGVTEGSLQPQECG 60
           M RKQI+E  F V+LLNC+LL  N +ISEAPTPQP + G NY +PM GV+EGSL+P+ECG
Sbjct: 1   MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECG 60

Query: 61  PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
            RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYN+WKTKRGGPKCP
Sbjct: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117

[Close]

BLAST of PI0024012 vs. ExPASy TrEMBL
Match: A0A6J1E399 (protein GAST1 OS=Momordica charantia OX=3673 GN=LOC111025644 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.2e-50
Identity = 94/116 (81.03%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGP 60
           M RKQ + + F+VM LN VLLV N AISEAPTPQPQ   N+  PM GVTEGSLQPQECGP
Sbjct: 1   MARKQTMMIFFLVMFLNWVLLVQNHAISEAPTPQPQPIGNHPGPMPGVTEGSLQPQECGP 60

Query: 61  RCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           RCT RCSKTAFKKPCMFFCQKCCAKCLCVP+GTYGNKQ+CPCYN WKTKRGGPKCP
Sbjct: 61  RCTDRCSKTAFKKPCMFFCQKCCAKCLCVPFGTYGNKQSCPCYNDWKTKRGGPKCP 116

[Close]

BLAST of PI0024012 vs. NCBI nr
Match: XP_008464949.1 (PREDICTED: protein GAST1-like [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 2.5e-61
Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 1   MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECG 60
           MGRKQIIE +LFVVMLLNCVLL HNQAISEAPTPQPQT ANYSNPMHGVTEGSLQPQECG
Sbjct: 1   MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSANYSNPMHGVTEGSLQPQECG 60

Query: 61  PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
Sbjct: 61  PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117

[Close]

BLAST of PI0024012 vs. NCBI nr
Match: XP_011652310.1 (protein GAST1 [Cucumis sativus] >KAE8651268.1 hypothetical protein Csa_001499 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MGRKQIIE-MLFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECG 60
           MGRKQ+IE +LFVVMLLNCVLLVHN AISEAPTPQPQT +NYSNPMHGVTEGSLQPQECG
Sbjct: 1   MGRKQVIEILLFVVMLLNCVLLVHNLAISEAPTPQPQTSSNYSNPMHGVTEGSLQPQECG 60

Query: 61  PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
            RCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP
Sbjct: 61  ARCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117

[Close]

BLAST of PI0024012 vs. NCBI nr
Match: XP_038903614.1 (protein GAST1 [Benincasa hispida])

HSP 1 Score: 226.9 bits (577), Expect = 9.2e-56
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTGANY-SNPMHGVTEGSLQPQECG 60
           M RKQ++ MLF+VMLLNCVLLVHN AISEAPTPQPQ+  NY S+PMHGVTEGSLQPQECG
Sbjct: 32  MARKQVMVMLFLVMLLNCVLLVHNHAISEAPTPQPQSSGNYSSSPMHGVTEGSLQPQECG 91

Query: 61  PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           PRCT RC KTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYN+WKTKRGGPKCP
Sbjct: 92  PRCTERCLKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNEWKTKRGGPKCP 148

[Close]

BLAST of PI0024012 vs. NCBI nr
Match: XP_022980754.1 (protein GAST1-like [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 3.6e-52
Identity = 95/118 (80.51%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQTG--ANYSNPMHGVTEGSLQPQEC 60
           M RKQ+ EM F VML NC+LL  N +ISEAPTPQPQ+G  +NY +PMHGVTEGSL+P+EC
Sbjct: 1   MARKQVTEMFFAVMLFNCLLLAQNHSISEAPTPQPQSGGSSNYPDPMHGVTEGSLEPEEC 60

Query: 61  GPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           G RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYN+WKTKRGGPKCP
Sbjct: 61  GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 118

[Close]

BLAST of PI0024012 vs. NCBI nr
Match: XP_023516497.1 (protein GAST1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.6 bits (540), Expect = 1.8e-51
Identity = 95/117 (81.20%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 1   MGRKQIIEMLFVVMLLNCVLLVHNQAISEAPTPQPQT-GANYSNPMHGVTEGSLQPQECG 60
           M RKQI+EM F VM LNC+LL  N +ISEAPTPQPQ+ G N  +PMHGVTEGSL+P+ECG
Sbjct: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG 60

Query: 61  PRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
            RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYN+WKTKRGGPKCP
Sbjct: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117

[Close]

BLAST of PI0024012 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein )

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 51  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKR 110
           GSL+  +CG +CT RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++
Sbjct: 36  GSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQ 95

Query: 111 GGPKCP 117
           GGPKCP
Sbjct: 96  GGPKCP 101

[Close]

BLAST of PI0024012 vs. TAIR 10
Match: AT3G10185.1 (Gibberellin-regulated family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-27
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 49  TEGSLQP-QECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWK 108
           T+ ++ P  ECGPRC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WK
Sbjct: 35  TKSAIPPLLECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWK 94

Query: 109 TKRGGPKCP 117
           TK GGPKCP
Sbjct: 95  TKSGGPKCP 103

[Close]

BLAST of PI0024012 vs. TAIR 10
Match: AT3G02885.1 (GAST1 protein homolog 5 )

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-27
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 51  GSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKR 110
           G L+PQ+C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQTCPCYN WKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 111 GGPKCP 117
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of PI0024012 vs. TAIR 10
Match: AT2G30810.1 (Gibberellin-regulated family protein )

HSP 1 Score: 114.4 bits (285), Expect = 6.2e-26
Identity = 54/107 (50.47%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 10  LFVVMLLNCVLLVHNQAISEAPTPQPQTGANYSNPMHGVTEGSLQPQECGPRCTGRCSKT 69
           L VV +++ +L     +  +    Q Q  A + N      EGSL+P+EC   C  RCS T
Sbjct: 4   LIVVFVISSLLFATQFSNGDELESQAQAPAIHKNG----GEGSLKPEECPKACEYRCSAT 63

Query: 70  AFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117
           + +KPC+FFC KCC KCLCVP GTYG+K+ CPCYN W TK GGPKCP
Sbjct: 64  SHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

[Close]

BLAST of PI0024012 vs. TAIR 10
Match: AT5G15230.2 (GAST1 protein homolog 4 )

HSP 1 Score: 100.5 bits (249), Expect = 9.2e-22
Identity = 43/80 (53.75%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 37  TGANYSNPMHGVTEGSLQPQECGPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGN 96
           +G+N          GSL+  +C   C  RC KT + K C+ FC KCC KCLCVP G YGN
Sbjct: 4   SGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGN 63

Query: 97  KQTCPCYNQWKTKRGGPKCP 117
           KQ C CYN WKT+ GGPKCP
Sbjct: 64  KQVCSCYNNWKTQEGGPKCP 83

The following BLAST results are available for this feature:

BLAST of PI0024012 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27057	3.2e-35	61.47	Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1	[more]
Q6NMQ7	1.9e-27	75.76	Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV...	[more]
P47926	1.2e-26	67.11	Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1	[more]
A8MR46	1.6e-26	72.46	Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 ...	[more]
Q84J95	4.6e-26	72.73	Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV...	[more]

BLAST of PI0024012 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMR4	1.2e-61	96.58	protein GAST1-like OS=Cucumis melo OX=3656 GN=LOC103502695 PE=3 SV=1	[more]
A0A0A0LI43	4.9e-55	96.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G841990 PE=3 SV=1	[more]
A0A6J1J049	1.7e-52	80.51	protein GAST1-like OS=Cucurbita maxima OX=3661 GN=LOC111480028 PE=3 SV=1	[more]
A0A6J1EQZ6	2.8e-50	78.63	protein GAST1-like OS=Cucurbita moschata OX=3662 GN=LOC111436994 PE=3 SV=1	[more]
A0A6J1E399	6.2e-50	81.03	protein GAST1 OS=Momordica charantia OX=3673 GN=LOC111025644 PE=3 SV=1	[more]

BLAST of PI0024012 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464949.1	2.5e-61	96.58	PREDICTED: protein GAST1-like [Cucumis melo]	[more]
XP_011652310.1	1.4e-59	94.02	protein GAST1 [Cucumis sativus] >KAE8651268.1 hypothetical protein Csa_001499 [C...	[more]
XP_038903614.1	9.2e-56	88.03	protein GAST1 [Benincasa hispida]	[more]
XP_022980754.1	3.6e-52	80.51	protein GAST1-like [Cucurbita maxima]	[more]
XP_023516497.1	1.8e-51	81.20	protein GAST1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0024012 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74670.1	1.3e-28	75.76	Gibberellin-regulated family protein	[more]
AT3G10185.1	1.1e-27	72.46	Gibberellin-regulated family protein	[more]
AT3G02885.1	3.3e-27	72.73	GAST1 protein homolog 5	[more]
AT2G30810.1	6.2e-26	50.47	Gibberellin-regulated family protein	[more]
AT5G15230.2	9.2e-22	53.75	GAST1 protein homolog 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 57..116 e-value: 1.8E-21 score: 76.0
None	No IPR available	PANTHER	PTHR23201:SF52	GIBBERELLIN-REGULATED PROTEIN 13	coord: 4..116
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 4..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024012.1	PI0024012.1	mRNA