PI0023996 (gene) Melon (PI 482460) v1

Overview
NamePI0023996
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTransposase
Locationchr02: 12707242 .. 12708230 (-)
RNA-Seq ExpressionPI0023996
SyntenyPI0023996
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTAATCAATTTAAGCGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAATATTGTGGTATGGTTGAAATTGGTTACATGTGTTTACTCACGTACATTGCGTAAGTATATAACGTTTATTACTTCACTTTTATAGTTCACATTTCAATACTAATTTTTGTTTTATGTAGGTATCTTTGGGATGAATTGGATAATGAGATAACCAAAAAAATTTGTGTCATTGACCAAACCAAAATATCTTCAATCGTAAAGTCTTCAGATCTTCGTTGTAGAAATTTAGCCAACCAACTAGAAATTGCTAGTTTTGACCAGTTAGTACTCATTCCATATAACAAGAGGTAAGTAAATAACAATTAATTTACATTACTCTACTACTTTTTAGTTCGTACTCAATGCATATTAAAAATATTGTTTATTGTAGTTACCATTGGCTATTGATTGTCATCAATCTTCAAGAAAATTTTGTTTATGTGTTGGACTCTCTTCGAAGTAAGGTGGATGAAGACTTCCACGTTGTTATAAATGTGTAAGTGCATTAGACTTTCTTAATTGTTAATTCAATGTTTATGAAGTACTAACTTTCAAAATTTCTAGTGGATTGAAAATTTGGCAATCTAAACATGATCTCCAACACTATCGATCAAATCCACAATGGAAACTTACGAAGGGAAAATTGTATTCCATAATTAAGTAAATATTTCATTTAGTTGAGATATATGAATGCATTGTTTTTAGCTTATTGATAACTCGTATAAATACAAGTTATTATGGTCTTTTAGGCGAAACAATGTGGGCAAAACGCGGAATAAATGGTCTAAACGCGTAGCTTGTAGTGCAAATATGTAATAATTTAAGAATGAGCTTCGCATAAGTCATATTGCGTGTTTAATTGTGTTTTATGTGTTTTTGCACACAGGAAGAAGGCGAAGAGAGGAATACTAGGTGATCAACATTGCATTTAG

mRNA sequence

ATGATTCTAATCAATTTAAGCGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAATATTGTGGTATGGTTGAAATTGGTTACATGTGTTTACTCACGTACATTGCGTATCTTTGGGATGAATTGGATAATGAGATAACCAAAAAAATTTGTGTCATTGACCAAACCAAAATATCTTCAATCGTAAAGTCTTCAGATCTTCGTTGTAGAAATTTAGCCAACCAACTAGAAATTGCTAGTTTTGACCAGTTAGTACTCATTCCATATAACAAGAGTTACCATTGGCTATTGATTGTCATCAATCTTCAAGAAAATTTTGTTTATGTGTTGGACTCTCTTCGAAGTAAGGTGGATGAAGACTTCCACGTTGTTATAAATGTGAAGAAGGCGAAGAGAGGAATACTAGGTGATCAACATTGCATTTAG

Coding sequence (CDS)

ATGATTCTAATCAATTTAAGCGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAATATTGTGGTATGGTTGAAATTGGTTACATGTGTTTACTCACGTACATTGCGTATCTTTGGGATGAATTGGATAATGAGATAACCAAAAAAATTTGTGTCATTGACCAAACCAAAATATCTTCAATCGTAAAGTCTTCAGATCTTCGTTGTAGAAATTTAGCCAACCAACTAGAAATTGCTAGTTTTGACCAGTTAGTACTCATTCCATATAACAAGAGTTACCATTGGCTATTGATTGTCATCAATCTTCAAGAAAATTTTGTTTATGTGTTGGACTCTCTTCGAAGTAAGGTGGATGAAGACTTCCACGTTGTTATAAATGTGAAGAAGGCGAAGAGAGGAATACTAGGTGATCAACATTGCATTTAG

Protein sequence

MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSKVDEDFHVVINVKKAKRGILGDQHCI
Homology
BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A5A7U441 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001120 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 0

Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           MI I ++E IFG +K VYL R+D+L YCGMVEIGYMC+L YI YLWDE D    +   VI
Sbjct: 595 MIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMCILAYITYLWDECD--CARNFFVI 654

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSL 120
           DQ+KISS +K  DLR RNLANQLE  + +Q VLIPYN  +HW+L VI+L+EN VYVLDSL
Sbjct: 655 DQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYNTGFHWMLHVIDLRENCVYVLDSL 714

Query: 121 RSKVDEDFHVVINV 135
           RSKV+ED H VINV
Sbjct: 715 RSKVNEDIHGVINV 726

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A6J1C2V2 (uncharacterized protein LOC111007859 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0

Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 453 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 512

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 513 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 572

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 573 IQEDYQRVIN 582

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A6J1C2H7 (uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0

Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 453 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 512

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 513 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 572

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 573 IQEDYQRVIN 582

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A6J1C4J7 (uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0

Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 452 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 511

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 512 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 571

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 572 IQEDYQRVIN 581

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A1S3BRX5 (uncharacterized protein LOC103493028 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493028 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.8e-39
Identity = 84/134 (62.69%), Postives = 107/134 (79.85%), Query Frame = 0

Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           +I I+LSEHIFGKEK +YL RDDI+QYCGM EIGY C+LTYIA LW+  ++EITK+  ++
Sbjct: 496 IIQISLSEHIFGKEKTIYLRRDDIIQYCGMTEIGYSCILTYIACLWNVCESEITKRFVLV 555

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNK-SYHWLLIVINLQENFVYVLDS 120
           DQ  ISS +KS + R RNL N+LE+A+ DQLVLIPYN  + HW+LI+I+LQEN VYV+D 
Sbjct: 556 DQATISSHIKSQENRSRNLINRLEMANLDQLVLIPYNTGTCHWILIIIDLQENCVYVMDP 615

Query: 121 LRSKVDEDFHVVIN 134
           LRSK+  +F  VIN
Sbjct: 616 LRSKILPEFQGVIN 629

BLAST of PI0023996 vs. NCBI nr
Match: XP_038895930.1 (uncharacterized protein LOC120084092 isoform X2 [Benincasa hispida])

HSP 1 Score: 180.6 bits (457), Expect = 9.6e-42
Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 0

Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           MI INLSE I GKEK +YL RDDI+QYCGM EIGY C+L YIA LW+  D+EITKK  ++
Sbjct: 481 MIQINLSEQILGKEKTIYLQRDDIIQYCGMAEIGYSCILAYIACLWNACDSEITKKFVIV 540

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSL 120
           DQ  ISS VK  +LR +NL N+LE+ S DQLVLIPYN   HW+LI+INLQEN VYV+DSL
Sbjct: 541 DQATISSHVKPQELRSKNLINRLEMVSLDQLVLIPYNTGCHWILIIINLQENCVYVMDSL 600

Query: 121 RSKVDEDFHVVIN 134
           RSK+ E+F  VIN
Sbjct: 601 RSKILEEFQGVIN 613

BLAST of PI0023996 vs. NCBI nr
Match: XP_038895921.1 (uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_038895924.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_038895927.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida])

HSP 1 Score: 177.6 bits (449), Expect = 8.1e-41
Identity = 89/134 (66.42%), Postives = 105/134 (78.36%), Query Frame = 0

Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           MI INLSE I GKEK +YL RDDI+QYCGM EIGY C+L YIA LW+  D+EITKK  ++
Sbjct: 481 MIQINLSEQILGKEKTIYLQRDDIIQYCGMAEIGYSCILAYIACLWNACDSEITKKFVIV 540

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNK-SYHWLLIVINLQENFVYVLDS 120
           DQ  ISS VK  +LR +NL N+LE+ S DQLVLIPYN  S HW+LI+INLQEN VYV+DS
Sbjct: 541 DQATISSHVKPQELRSKNLINRLEMVSLDQLVLIPYNTGSCHWILIIINLQENCVYVMDS 600

Query: 121 LRSKVDEDFHVVIN 134
           LRSK+ E+F  VIN
Sbjct: 601 LRSKILEEFQGVIN 614

BLAST of PI0023996 vs. NCBI nr
Match: XP_022136080.1 (uncharacterized protein LOC111007859 isoform X4 [Momordica charantia])

HSP 1 Score: 171.4 bits (433), Expect = 5.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0

Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 453 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 512

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 513 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 572

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 573 IQEDYQRVIN 582

BLAST of PI0023996 vs. NCBI nr
Match: KAA0050643.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 5.8e-39
Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 0

Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           MI I ++E IFG +K VYL R+D+L YCGMVEIGYMC+L YI YLWDE D    +   VI
Sbjct: 595 MIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMCILAYITYLWDECD--CARNFFVI 654

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSL 120
           DQ+KISS +K  DLR RNLANQLE  + +Q VLIPYN  +HW+L VI+L+EN VYVLDSL
Sbjct: 655 DQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYNTGFHWMLHVIDLRENCVYVLDSL 714

Query: 121 RSKVDEDFHVVINV 135
           RSKV+ED H VINV
Sbjct: 715 RSKVNEDIHGVINV 726

BLAST of PI0023996 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia])

HSP 1 Score: 171.4 bits (433), Expect = 5.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0

Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 453 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 512

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 513 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 572

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 573 IQEDYQRVIN 582

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U4412.8e-3964.93Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001120 P... [more]
A0A6J1C2V22.8e-3963.08uncharacterized protein LOC111007859 isoform X4 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C2H72.8e-3963.08uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C4J72.8e-3963.08uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A1S3BRX54.8e-3962.69uncharacterized protein LOC103493028 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
XP_038895930.19.6e-4266.17uncharacterized protein LOC120084092 isoform X2 [Benincasa hispida][more]
XP_038895921.18.1e-4166.42uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_03889592... [more]
XP_022136080.15.8e-3963.08uncharacterized protein LOC111007859 isoform X4 [Momordica charantia][more]
KAA0050643.15.8e-3964.93transposase [Cucumis melo var. makuwa][more]
XP_022136076.15.8e-3963.08uncharacterized protein LOC111007859 isoform X1 [Momordica charantia][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003653Ulp1 protease family, C-terminal catalytic domainPFAMPF02902Peptidase_C48coord: 91..125
e-value: 3.9E-6
score: 26.9
NoneNo IPR availableGENE3D3.40.395.10Adenoviral Proteinase; Chain Acoord: 5..145
e-value: 6.7E-13
score: 50.5
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 13..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023996.1PI0023996.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
molecular_function GO:0008234 cysteine-type peptidase activity