PI0023996 (gene) Melon (PI 482460) v1

Overview


Name	PI0023996
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transposase
Location	chr02: 12707242 .. 12708230 (-)
RNA-Seq Expression	PI0023996
Synteny	PI0023996

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTAATCAATTTAAGCGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAATATTGTGGTATGGTTGAAATTGGTTACATGTGTTTACTCACGTACATTGCGTAAGTATATAACGTTTATTACTTCACTTTTATAGTTCACATTTCAATACTAATTTTTGTTTTATGTAGGTATCTTTGGGATGAATTGGATAATGAGATAACCAAAAAAATTTGTGTCATTGACCAAACCAAAATATCTTCAATCGTAAAGTCTTCAGATCTTCGTTGTAGAAATTTAGCCAACCAACTAGAAATTGCTAGTTTTGACCAGTTAGTACTCATTCCATATAACAAGAGGTAAGTAAATAACAATTAATTTACATTACTCTACTACTTTTTAGTTCGTACTCAATGCATATTAAAAATATTGTTTATTGTAGTTACCATTGGCTATTGATTGTCATCAATCTTCAAGAAAATTTTGTTTATGTGTTGGACTCTCTTCGAAGTAAGGTGGATGAAGACTTCCACGTTGTTATAAATGTGTAAGTGCATTAGACTTTCTTAATTGTTAATTCAATGTTTATGAAGTACTAACTTTCAAAATTTCTAGTGGATTGAAAATTTGGCAATCTAAACATGATCTCCAACACTATCGATCAAATCCACAATGGAAACTTACGAAGGGAAAATTGTATTCCATAATTAAGTAAATATTTCATTTAGTTGAGATATATGAATGCATTGTTTTTAGCTTATTGATAACTCGTATAAATACAAGTTATTATGGTCTTTTAGGCGAAACAATGTGGGCAAAACGCGGAATAAATGGTCTAAACGCGTAGCTTGTAGTGCAAATATGTAATAATTTAAGAATGAGCTTCGCATAAGTCATATTGCGTGTTTAATTGTGTTTTATGTGTTTTTGCACACAGGAAGAAGGCGAAGAGAGGAATACTAGGTGATCAACATTGCATTTAG

mRNA sequence

ATGATTCTAATCAATTTAAGCGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAATATTGTGGTATGGTTGAAATTGGTTACATGTGTTTACTCACGTACATTGCGTATCTTTGGGATGAATTGGATAATGAGATAACCAAAAAAATTTGTGTCATTGACCAAACCAAAATATCTTCAATCGTAAAGTCTTCAGATCTTCGTTGTAGAAATTTAGCCAACCAACTAGAAATTGCTAGTTTTGACCAGTTAGTACTCATTCCATATAACAAGAGTTACCATTGGCTATTGATTGTCATCAATCTTCAAGAAAATTTTGTTTATGTGTTGGACTCTCTTCGAAGTAAGGTGGATGAAGACTTCCACGTTGTTATAAATGTGAAGAAGGCGAAGAGAGGAATACTAGGTGATCAACATTGCATTTAG

Coding sequence (CDS)

ATGATTCTAATCAATTTAAGCGAGCATATATTTGGAAAGGAGAAATTAGTTTATTTGCATCGTGATGACATACTTCAATATTGTGGTATGGTTGAAATTGGTTACATGTGTTTACTCACGTACATTGCGTATCTTTGGGATGAATTGGATAATGAGATAACCAAAAAAATTTGTGTCATTGACCAAACCAAAATATCTTCAATCGTAAAGTCTTCAGATCTTCGTTGTAGAAATTTAGCCAACCAACTAGAAATTGCTAGTTTTGACCAGTTAGTACTCATTCCATATAACAAGAGTTACCATTGGCTATTGATTGTCATCAATCTTCAAGAAAATTTTGTTTATGTGTTGGACTCTCTTCGAAGTAAGGTGGATGAAGACTTCCACGTTGTTATAAATGTGAAGAAGGCGAAGAGAGGAATACTAGGTGATCAACATTGCATTTAG

Protein sequence

MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSKVDEDFHVVINVKKAKRGILGDQHCI

Homology

[Close]

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A5A7U441 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001120 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           MI I ++E IFG +K VYL R+D+L YCGMVEIGYMC+L YI YLWDE D    +   VI
Sbjct: 595 MIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMCILAYITYLWDECD--CARNFFVI 654

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSL 120
           DQ+KISS +K  DLR RNLANQLE  + +Q VLIPYN  +HW+L VI+L+EN VYVLDSL
Sbjct: 655 DQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYNTGFHWMLHVIDLRENCVYVLDSL 714

Query: 121 RSKVDEDFHVVINV 135
           RSKV+ED H VINV
Sbjct: 715 RSKVNEDIHGVINV 726

[Close]

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A6J1C2V2 (uncharacterized protein LOC111007859 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0


Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 453 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 512

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 513 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 572

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 573 IQEDYQRVIN 582

[Close]

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A6J1C2H7 (uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0


Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 453 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 512

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 513 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 572

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 573 IQEDYQRVIN 582

[Close]

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A6J1C4J7 (uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0


Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 452 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 511

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 512 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 571

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 572 IQEDYQRVIN 581

[Close]

BLAST of PI0023996 vs. ExPASy TrEMBL
Match: A0A1S3BRX5 (uncharacterized protein LOC103493028 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493028 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.8e-39
Identity = 84/134 (62.69%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           +I I+LSEHIFGKEK +YL RDDI+QYCGM EIGY C+LTYIA LW+  ++EITK+  ++
Sbjct: 496 IIQISLSEHIFGKEKTIYLRRDDIIQYCGMTEIGYSCILTYIACLWNVCESEITKRFVLV 555

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNK-SYHWLLIVINLQENFVYVLDS 120
           DQ  ISS +KS + R RNL N+LE+A+ DQLVLIPYN  + HW+LI+I+LQEN VYV+D 
Sbjct: 556 DQATISSHIKSQENRSRNLINRLEMANLDQLVLIPYNTGTCHWILIIIDLQENCVYVMDP 615

Query: 121 LRSKVDEDFHVVIN 134
           LRSK+  +F  VIN
Sbjct: 616 LRSKILPEFQGVIN 629

[Close]

BLAST of PI0023996 vs. NCBI nr
Match: XP_038895930.1 (uncharacterized protein LOC120084092 isoform X2 [Benincasa hispida])

HSP 1 Score: 180.6 bits (457), Expect = 9.6e-42
Identity = 88/133 (66.17%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           MI INLSE I GKEK +YL RDDI+QYCGM EIGY C+L YIA LW+  D+EITKK  ++
Sbjct: 481 MIQINLSEQILGKEKTIYLQRDDIIQYCGMAEIGYSCILAYIACLWNACDSEITKKFVIV 540

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSL 120
           DQ  ISS VK  +LR +NL N+LE+ S DQLVLIPYN   HW+LI+INLQEN VYV+DSL
Sbjct: 541 DQATISSHVKPQELRSKNLINRLEMVSLDQLVLIPYNTGCHWILIIINLQENCVYVMDSL 600

Query: 121 RSKVDEDFHVVIN 134
           RSK+ E+F  VIN
Sbjct: 601 RSKILEEFQGVIN 613

[Close]

BLAST of PI0023996 vs. NCBI nr
Match: XP_038895921.1 (uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_038895924.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_038895927.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida])

HSP 1 Score: 177.6 bits (449), Expect = 8.1e-41
Identity = 89/134 (66.42%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           MI INLSE I GKEK +YL RDDI+QYCGM EIGY C+L YIA LW+  D+EITKK  ++
Sbjct: 481 MIQINLSEQILGKEKTIYLQRDDIIQYCGMAEIGYSCILAYIACLWNACDSEITKKFVIV 540

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNK-SYHWLLIVINLQENFVYVLDS 120
           DQ  ISS VK  +LR +NL N+LE+ S DQLVLIPYN  S HW+LI+INLQEN VYV+DS
Sbjct: 541 DQATISSHVKPQELRSKNLINRLEMVSLDQLVLIPYNTGSCHWILIIINLQENCVYVMDS 600

Query: 121 LRSKVDEDFHVVIN 134
           LRSK+ E+F  VIN
Sbjct: 601 LRSKILEEFQGVIN 614

[Close]

BLAST of PI0023996 vs. NCBI nr
Match: XP_022136080.1 (uncharacterized protein LOC111007859 isoform X4 [Momordica charantia])

HSP 1 Score: 171.4 bits (433), Expect = 5.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0


Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 453 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 512

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 513 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 572

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 573 IQEDYQRVIN 582

[Close]

BLAST of PI0023996 vs. NCBI nr
Match: KAA0050643.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 5.8e-39
Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 1   MILINLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVI 60
           MI I ++E IFG +K VYL R+D+L YCGMVEIGYMC+L YI YLWDE D    +   VI
Sbjct: 595 MIRIPMNELIFGSDKFVYLAREDLLHYCGMVEIGYMCILAYITYLWDECD--CARNFFVI 654

Query: 61  DQTKISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSL 120
           DQ+KISS +K  DLR RNLANQLE  + +Q VLIPYN  +HW+L VI+L+EN VYVLDSL
Sbjct: 655 DQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYNTGFHWMLHVIDLRENCVYVLDSL 714

Query: 121 RSKVDEDFHVVINV 135
           RSKV+ED H VINV
Sbjct: 715 RSKVNEDIHGVINV 726

[Close]

BLAST of PI0023996 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia])

HSP 1 Score: 171.4 bits (433), Expect = 5.8e-39
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 0


Query: 4   INLSEHIFGKEKLVYLHRDDILQYCGMVEIGYMCLLTYIAYLWDELDNEITKKICVIDQT 63
           INLS+ IFGKEK +YL R+DI+QYC M+EIGY C+LTYIAYLWD  + EITKK  ++D  
Sbjct: 453 INLSKDIFGKEKNIYLTRNDIMQYCTMIEIGYSCILTYIAYLWDVYEYEITKKFLIVDPA 512

Query: 64  KISSIVKSSDLRCRNLANQLEIASFDQLVLIPYNKSYHWLLIVINLQENFVYVLDSLRSK 123
            IS  VKS + R RNLAN+LE+ + +QLVLIPY    HW+LI+INL+EN VYVLDSLR K
Sbjct: 513 TISPYVKSQEYRFRNLANRLEMVNLEQLVLIPYKSGCHWMLIIINLRENCVYVLDSLRRK 572

Query: 124 VDEDFHVVIN 134
           + ED+  VIN
Sbjct: 573 IQEDYQRVIN 582

The following BLAST results are available for this feature:

BLAST of PI0023996 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023996 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U441	2.8e-39	64.93	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001120 P...	[more]
A0A6J1C2V2	2.8e-39	63.08	uncharacterized protein LOC111007859 isoform X4 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C2H7	2.8e-39	63.08	uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C4J7	2.8e-39	63.08	uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3BRX5	4.8e-39	62.69	uncharacterized protein LOC103493028 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of PI0023996 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895930.1	9.6e-42	66.17	uncharacterized protein LOC120084092 isoform X2 [Benincasa hispida]	[more]
XP_038895921.1	8.1e-41	66.42	uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_03889592...	[more]
XP_022136080.1	5.8e-39	63.08	uncharacterized protein LOC111007859 isoform X4 [Momordica charantia]	[more]
KAA0050643.1	5.8e-39	64.93	transposase [Cucumis melo var. makuwa]	[more]
XP_022136076.1	5.8e-39	63.08	uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]	[more]

BLAST of PI0023996 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 91..125 e-value: 3.9E-6 score: 26.9
None	No IPR available	GENE3D	3.40.395.10	Adenoviral Proteinase; Chain A	coord: 5..145 e-value: 6.7E-13 score: 50.5
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 13..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023996.1	PI0023996.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016020	membrane
molecular_function	GO:0008234	cysteine-type peptidase activity