PI0023831 (gene) Melon (PI 482460) v1

Overview
NamePI0023831
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionEmbryo sac development arrest protein
Locationchr05: 18048508 .. 18048867 (+)
RNA-Seq ExpressionPI0023831
SyntenyPI0023831
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCCTCCTGGGGGTTCACCAAGGAAGCGAAAGGAGGTTGAGCCGCTTGTGAAGCCGAAAGTTGCAGGAGCCGACTCAATTTCAGCAAATCGACTTCTAGCAGGCTATCTTGCTCACGAGTTTCTCAGTAACGGCACTTTGTTTGGGGAGAAGTATGAACCGGCTCAAAGCGAAGCTGTTGGAATGGCTAACTCGCAGTCAACCGAGTGTAAGAGGACGAAGCTGGAAGCCGCGGCGGCGAGCATACAAAAAGTAAATCATAGCTATGCTGAGGTGGCAAGCATCTTGAAGATGGATGGAGCCCATTTGCCTGGAATTGTTAACCCGGGCCAGCTCGCTTGGTGGATTAAAATGTAA

mRNA sequence

ATGTCGCCTCCTGGGGGTTCACCAAGGAAGCGAAAGGAGGTTGAGCCGCTTGTGAAGCCGAAAGTTGCAGGAGCCGACTCAATTTCAGCAAATCGACTTCTAGCAGGCTATCTTGCTCACGAGTTTCTCAGTAACGGCACTTTGTTTGGGGAGAAGTATGAACCGGCTCAAAGCGAAGCTGTTGGAATGGCTAACTCGCAGTCAACCGAGTGTAAGAGGACGAAGCTGGAAGCCGCGGCGGCGAGCATACAAAAAGTAAATCATAGCTATGCTGAGGTGGCAAGCATCTTGAAGATGGATGGAGCCCATTTGCCTGGAATTGTTAACCCGGGCCAGCTCGCTTGGTGGATTAAAATGTAA

Coding sequence (CDS)

ATGTCGCCTCCTGGGGGTTCACCAAGGAAGCGAAAGGAGGTTGAGCCGCTTGTGAAGCCGAAAGTTGCAGGAGCCGACTCAATTTCAGCAAATCGACTTCTAGCAGGCTATCTTGCTCACGAGTTTCTCAGTAACGGCACTTTGTTTGGGGAGAAGTATGAACCGGCTCAAAGCGAAGCTGTTGGAATGGCTAACTCGCAGTCAACCGAGTGTAAGAGGACGAAGCTGGAAGCCGCGGCGGCGAGCATACAAAAAGTAAATCATAGCTATGCTGAGGTGGCAAGCATCTTGAAGATGGATGGAGCCCATTTGCCTGGAATTGTTAACCCGGGCCAGCTCGCTTGGTGGATTAAAATGTAA

Protein sequence

MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAVGMANSQSTECKRTKLEAAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM
Homology
BLAST of PI0023831 vs. ExPASy TrEMBL
Match: A0A0A0LI65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173040 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.3e-55
Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           MSPPGGSPRKRKEVEPLVKPKVA ADSISANRLLAGYLAHEFL NGTLFGEKYEPA +EA
Sbjct: 1   MSPPGGSPRKRKEVEPLVKPKVAEADSISANRLLAGYLAHEFLCNGTLFGEKYEPALNEA 60

Query: 61  VGMANSQSTECKRTKLEAAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
           VGMANSQSTECKRTKLEAAAASI+KVNHSYAEVA ILKMDGAHLPGIVNPGQLAWWIKM
Sbjct: 61  VGMANSQSTECKRTKLEAAAASIKKVNHSYAEVARILKMDGAHLPGIVNPGQLAWWIKM 119

BLAST of PI0023831 vs. ExPASy TrEMBL
Match: A0A5A7UAS9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00360 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.2e-52
Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           MSPPGGSPRKRKEVEPLVKPKVA AD+ISANRLLAGYLAHEFLSNGTLFGEKYE AQ+EA
Sbjct: 1   MSPPGGSPRKRKEVEPLVKPKVAEADAISANRLLAGYLAHEFLSNGTLFGEKYETAQTEA 60

Query: 61  VGMANSQSTECKRTKLEAAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
           VGMAN QS ECKRTK EAAAA I+K+N SYAEVASILKMDGAHLPGIVNPGQLAWWIKM
Sbjct: 61  VGMANLQSAECKRTKPEAAAAGIKKLNPSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 119

BLAST of PI0023831 vs. ExPASy TrEMBL
Match: A0A6J1KXG9 (uncharacterized protein LOC111499092 OS=Cucurbita maxima OX=3661 GN=LOC111499092 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.9e-42
Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           M PP  S RKRKEVEP VKPK  G DS+S+N+LLAGYLAHEFLS GTLFGEKYEP +SEA
Sbjct: 11  MLPPRAS-RKRKEVEPFVKPKATGVDSVSSNQLLAGYLAHEFLSKGTLFGEKYEPPRSEA 70

Query: 61  VGMANSQSTECKRTKLEAAAA-SIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
           VGM +SQ +ECKRTK EAAAA S++K NHSYAEVASILKMDGAHLPGIVNP QLA WIKM
Sbjct: 71  VGMTSSQPSECKRTKPEAAAAPSVRKENHSYAEVASILKMDGAHLPGIVNPAQLARWIKM 129

BLAST of PI0023831 vs. ExPASy TrEMBL
Match: A0A6J1H3W4 (uncharacterized protein LOC111460190 OS=Cucurbita moschata OX=3662 GN=LOC111460190 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.0e-39
Identity = 92/126 (73.02%), Postives = 101/126 (80.16%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           M PP  S RKRKEVEP VKPK    DS+S+N+LLAGYLAHEFLS GTLFGEKYEPA+SEA
Sbjct: 11  MLPPRAS-RKRKEVEPFVKPKATAVDSVSSNQLLAGYLAHEFLSKGTLFGEKYEPARSEA 70

Query: 61  VGMANSQSTECKRTKLEAAAA-------SIQKVNHSYAEVASILKMDGAHLPGIVNPGQL 120
           VGM +SQ +ECKR K EAA A       S++K +HSYAEVASILKMDGAHLPGIVNP QL
Sbjct: 71  VGMTSSQPSECKRMKPEAATAAAAAAAPSVRKEDHSYAEVASILKMDGAHLPGIVNPAQL 130

BLAST of PI0023831 vs. ExPASy TrEMBL
Match: A0A6J1HJY7 (uncharacterized protein LOC111464257 OS=Cucurbita moschata OX=3662 GN=LOC111464257 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.9e-39
Identity = 92/120 (76.67%), Postives = 100/120 (83.33%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           M PPG S RKRKEVE  VKPK  GADS+ +NRLLAGYLAHEFLS GTLFGEKYEPA+SEA
Sbjct: 12  MLPPGAS-RKRKEVEAFVKPKAVGADSVVSNRLLAGYLAHEFLSKGTLFGEKYEPARSEA 71

Query: 61  VGMANSQSTECKRTKLEAAAA-SIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
           VGM  S+  E K+TK EAAAA S++K N SYAEVASILKM+GAHLPGIVNP QLA WIKM
Sbjct: 72  VGMTCSRPAEYKKTKPEAAAAPSVEKENQSYAEVASILKMEGAHLPGIVNPAQLARWIKM 130

BLAST of PI0023831 vs. NCBI nr
Match: KGN61585.1 (hypothetical protein Csa_006307 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 4.7e-55
Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           MSPPGGSPRKRKEVEPLVKPKVA ADSISANRLLAGYLAHEFL NGTLFGEKYEPA +EA
Sbjct: 1   MSPPGGSPRKRKEVEPLVKPKVAEADSISANRLLAGYLAHEFLCNGTLFGEKYEPALNEA 60

Query: 61  VGMANSQSTECKRTKLEAAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
           VGMANSQSTECKRTKLEAAAASI+KVNHSYAEVA ILKMDGAHLPGIVNPGQLAWWIKM
Sbjct: 61  VGMANSQSTECKRTKLEAAAASIKKVNHSYAEVARILKMDGAHLPGIVNPGQLAWWIKM 119

BLAST of PI0023831 vs. NCBI nr
Match: KAA0050715.1 (hypothetical protein E6C27_scaffold560G00090 [Cucumis melo var. makuwa] >TYK01448.1 hypothetical protein E5676_scaffold772G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           MSPPGGSPRKRKEVEPLVKPKVA AD+ISANRLLAGYLAHEFLSNGTLFGEKYE AQ+EA
Sbjct: 1   MSPPGGSPRKRKEVEPLVKPKVAEADAISANRLLAGYLAHEFLSNGTLFGEKYETAQTEA 60

Query: 61  VGMANSQSTECKRTKLEAAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
           VGMAN QS ECKRTK EAAAA I+K+N SYAEVASILKMDGAHLPGIVNPGQLAWWIKM
Sbjct: 61  VGMANLQSAECKRTKPEAAAAGIKKLNPSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 119

BLAST of PI0023831 vs. NCBI nr
Match: XP_038875618.1 (uncharacterized protein LOC120068023 [Benincasa hispida] >XP_038875619.1 uncharacterized protein LOC120068023 [Benincasa hispida] >XP_038875620.1 uncharacterized protein LOC120068023 [Benincasa hispida])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 106/119 (89.08%), Postives = 110/119 (92.44%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           M PPGG+PRKRKEVEP VKPKV GADSISANRLLAGYLAHEFL+NGTLFGEKYEPAQSE 
Sbjct: 1   MLPPGGAPRKRKEVEPFVKPKVVGADSISANRLLAGYLAHEFLNNGTLFGEKYEPAQSEV 60

Query: 61  VGMANSQSTECKRTKLEAAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
           VGMAN QSTECKRTK EAA+ SI+K NHSYAEVASILKMDGAHLPGIVNP QLAWWIKM
Sbjct: 61  VGMANLQSTECKRTKPEAASPSIKKGNHSYAEVASILKMDGAHLPGIVNPAQLAWWIKM 119

BLAST of PI0023831 vs. NCBI nr
Match: XP_023547636.1 (uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo] >XP_023547637.1 uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 2.7e-42
Identity = 96/122 (78.69%), Postives = 104/122 (85.25%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           M PP  S RKRKEVEP VKPK  G DS+S+N+LLAGYLAHEFLS GTLFGEKYEPA+SEA
Sbjct: 11  MLPPRAS-RKRKEVEPFVKPKATGVDSVSSNQLLAGYLAHEFLSKGTLFGEKYEPARSEA 70

Query: 61  VGMANSQSTECKRTKLEAAAA---SIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWI 120
           VGM +SQ +ECKRTK EAAAA   S++K NHSYAEVASILKMDGAHLPGIVNP QLA WI
Sbjct: 71  VGMTSSQPSECKRTKPEAAAAAAPSVRKENHSYAEVASILKMDGAHLPGIVNPAQLARWI 130

BLAST of PI0023831 vs. NCBI nr
Match: XP_023006321.1 (uncharacterized protein LOC111499092 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 5.9e-42
Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 0

Query: 1   MSPPGGSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 60
           M PP  S RKRKEVEP VKPK  G DS+S+N+LLAGYLAHEFLS GTLFGEKYEP +SEA
Sbjct: 11  MLPPRAS-RKRKEVEPFVKPKATGVDSVSSNQLLAGYLAHEFLSKGTLFGEKYEPPRSEA 70

Query: 61  VGMANSQSTECKRTKLEAAAA-SIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
           VGM +SQ +ECKRTK EAAAA S++K NHSYAEVASILKMDGAHLPGIVNP QLA WIKM
Sbjct: 71  VGMTSSQPSECKRTKPEAAAAPSVRKENHSYAEVASILKMDGAHLPGIVNPAQLARWIKM 129

BLAST of PI0023831 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 3.4e-19
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 0

Query: 3   PPGGSPRKRKEV--EPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEA 62
           PP  S  K+  +   P     VA A+ + +N+LLAGYLAHEFL+NGTLFGE + P +++A
Sbjct: 33  PPTKSIVKKTPIIPRPTTTATVALAEPVCSNQLLAGYLAHEFLNNGTLFGELWNPTKAQA 92

Query: 63  VGMANSQSTECKRTKLEAAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
            G   +QS + ++ K              Y EVA+IL++DG HLPGIVNP QLA ++K+
Sbjct: 93  -GPLTTQSIDPRKNKPSHDIEPSDHKRRRYVEVANILRVDGTHLPGIVNPSQLARFLKL 150

BLAST of PI0023831 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 0

Query: 19  KPKVAGADSISANRL-LAGYLAHEFLSNGTLFGEKYEPAQSEAVGMANSQSTECKRTKLE 78
           K   A A+ I +N+L LAGYL+HE+L+ GTLFGE++  A+++A      +S++ K +   
Sbjct: 57  KSSTAAAEPIGSNQLMLAGYLSHEYLTQGTLFGEQWNQARAQA------ESSKIKPSHTV 116

Query: 79  AAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
             A   +     Y EVA++L+ DGA LPGIVNP QLA ++K+
Sbjct: 117 EPAEECEPKRKRYREVANLLRSDGAQLPGIVNPAQLARFLKL 152

BLAST of PI0023831 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 )

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 0

Query: 6   GSPRKRKEVEPLVKPKVAGADSISANRLLAGYLAHEFLSNGTLFGEKYEPAQSEAVGMAN 65
           G+ RKRK+ E  ++      ++ + N LLAGY+AHE+L+ GT+ G K     +E   + +
Sbjct: 10  GASRKRKDTESDLR------EAATPNWLLAGYMAHEYLTCGTMLGRKLYSGWAEVGPLVS 69

Query: 66  SQSTECKRTKLEAAAASIQKVNHSYAEVASILKMDGAHLPGIVNPGQLAWWIKM 120
               + +  K         K   SY+EVAS+ K DG H+PG+VNP QLA WI+M
Sbjct: 70  PSPLQSREVK---------KARQSYSEVASVFKTDGNHVPGVVNPTQLAKWIQM 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LI652.3e-5594.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173040 PE=4 SV=1[more]
A0A5A7UAS95.2e-5290.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1KXG92.9e-4279.17uncharacterized protein LOC111499092 OS=Cucurbita maxima OX=3661 GN=LOC111499092... [more]
A0A6J1H3W41.0e-3973.02uncharacterized protein LOC111460190 OS=Cucurbita moschata OX=3662 GN=LOC1114601... [more]
A0A6J1HJY73.9e-3976.67uncharacterized protein LOC111464257 OS=Cucurbita moschata OX=3662 GN=LOC1114642... [more]
Match NameE-valueIdentityDescription
KGN61585.14.7e-5594.96hypothetical protein Csa_006307 [Cucumis sativus][more]
KAA0050715.11.1e-5190.76hypothetical protein E6C27_scaffold560G00090 [Cucumis melo var. makuwa] >TYK0144... [more]
XP_038875618.11.4e-5189.08uncharacterized protein LOC120068023 [Benincasa hispida] >XP_038875619.1 unchara... [more]
XP_023547636.12.7e-4278.69uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo] >XP_023547637.... [more]
XP_023006321.15.9e-4279.17uncharacterized protein LOC111499092 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G44060.13.4e-1944.54unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G04000.12.3e-1543.14unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G23440.12.3e-1538.60embryo sac development arrest 6 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34657EMBRYO SAC DEVELOPMENT ARREST 6coord: 19..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023831.1PI0023831.1mRNA