PI0023782 (gene) Melon (PI 482460) v1

Overview


Name	PI0023782
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transposase
Location	chr06: 26255737 .. 26257330 (-)
RNA-Seq Expression	PI0023782
Synteny	PI0023782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTGGATGAGAACATCTCAACGTACGTACGATCGGATTGTGAAGGCACATCGATACCCACATAAAATTTTACTGGTTCGTTTTCAAATTTTGTAAAGAATAATACCATAATCTTACCATGTTCATTCATCCCATTTCATTTTTTTATTGCATAAAGTTAATAAATCATGCTAATTGTTTCTTGATTTTGATTGACAGGCTTCGATGGACGATTTAAACAAAGACCTTGGTAGCAGTGAGTTAAATGTACCACTTGGAATTGAGGAAGCTGAGGGGGAAAATTTGGGTATTGCAAGTGATACCACGAAACAGAAGAAGAGACCACGAGGGCCTACTATTATGTTCGATGTAACACGCATTAGAAGTTTGGGAGATAAGAAGGTGGTGAAGTACAATGAATATGGGGTACCACTTGGTGGGAATGGAGCGAAGTTGAAGTCTTTCATAGGGTCTTCAACACATTATCATGTCCCTATCATATATAAGACTTGGAAAAGTGTGCCTGAAGAATTGAAAGATAAGATATTCAATACAGTTGAGGTATGTACAATTTTAATTTGTTTATCACGTCCCTAATATATATACTTCTTGATGATCCAAGTGTATTTACTAATTAATACTTTTAAATATATAGGCCGCATTCGTTATAGATCCAAAATCTAGGAAAAATATTCTCCAAACTACGGGCATTTCATTTCGTCAGTTTAAGAACTGGCTAACCACGAAATACATTATGCCGCACAAAGATGAGCCGCAACTCCTACAAGCTCCACCCGAAAAGTATTCATTTATTGATCAGAATCATTGGGAAGAATTTGTGAGTTCAAGATTGTGTGAGACTTTTCAGGTATGAACAACGTTTTCATGTTAGATAGTTTAGGATTTCTAACTTCCTCACTAATACTTTTTGTACATGAATGTAGGAAAAAAGGCGATTACAACAAGATCGACGATCTAAGAACAAATACAACCATAGAATTTCGAGGAAAGGCTATGCCAATCTTATTGAAGAAATGGTAAGAATTAGTTTATGTCTCACAATTGTTAAGTTTATGATAATACCAAACATCTTTGTTCATTGGAATGTAGAAGAATGAGGGTTCAAATGAAGATGATTTGGATCGAGCCAGCATGTGGAAGAAGGCTCGAGTCAATAAAGAAGGAGGGTATGGTCACAAAAGAATATTCAGAAAAGCCGGAAACAAACTTTATGGCGAACAGTAAAGGCAAGTATAAACATTTACTATATACTCATTATTGTATTTTGTAAACTACTAGCAATTATGATTAGTTCATAATTTGAATTTGTTGTCTTTATGTAGTGTCCTCTACAAGTCGGGAACACCGAGTGTGGATATTACGTCATGAGGTTTATGAGGGAGATTGTGACTAGAGGAAGAATTGTCATCTCAGATTCGGTATGTGAATTCAAACTTTCTTTTTTGAGAGCATATAATTTGTTGAGACTTGACTTAATTAATCTATTTTCCATGTTCATTGGTATTAGATTGACACACGAAGATCATACTCACAGATGGAGTTGGACGAGGTGCGAATTGAGTTGGCTGACTTTTTGGGTTCTTACATGTGA

mRNA sequence

ATGACTTGGATGAGAACATCTCAACGTACGTACGATCGGATTGTGAAGGCACATCGATACCCACATAAAATTTTACTGGCTTCGATGGACGATTTAAACAAAGACCTTGGTAGCAGTGAGTTAAATGTACCACTTGGAATTGAGGAAGCTGAGGGGGAAAATTTGGGTATTGCAAGTGATACCACGAAACAGAAGAAGAGACCACGAGGGCCTACTATTATGTTCGATGTAACACGCATTAGAAGTTTGGGAGATAAGAAGGTGGTGAAGTACAATGAATATGGGGTACCACTTGGTGGGAATGGAGCGAAGTTGAAGTCTTTCATAGGGTCTTCAACACATTATCATGTCCCTATCATATATAAGACTTGGAAAAGTGTGCCTGAAGAATTGAAAGATAAGATATTCAATACAGTTGAGGCCGCATTCGTTATAGATCCAAAATCTAGGAAAAATATTCTCCAAACTACGGGCATTTCATTTCGTCAGTTTAAGAACTGGCTAACCACGAAATACATTATGCCGCACAAAGATGAGCCGCAACTCCTACAAGCTCCACCCGAAAAGTATTCATTTATTGATCAGAATCATTGGGAAGAATTTGTGAGTTCAAGATTGTGTGAGACTTTTCAGGAAAAAAGGCGATTACAACAAGATCGACGATCTAAGAACAAATACAACCATAGAATTTCGAGGAAAGGCTATGCCAATCTTATTGAAGAAATGTGTCCTCTACAAGTCGGGAACACCGAGTGTGGATATTACGTCATGAGGTTTATGAGGGAGATTGTGACTAGAGGAAGAATTGTCATCTCAGATTCGATTGACACACGAAGATCATACTCACAGATGGAGTTGGACGAGGTGCGAATTGAGTTGGCTGACTTTTTGGGTTCTTACATGTGA

Coding sequence (CDS)

ATGACTTGGATGAGAACATCTCAACGTACGTACGATCGGATTGTGAAGGCACATCGATACCCACATAAAATTTTACTGGCTTCGATGGACGATTTAAACAAAGACCTTGGTAGCAGTGAGTTAAATGTACCACTTGGAATTGAGGAAGCTGAGGGGGAAAATTTGGGTATTGCAAGTGATACCACGAAACAGAAGAAGAGACCACGAGGGCCTACTATTATGTTCGATGTAACACGCATTAGAAGTTTGGGAGATAAGAAGGTGGTGAAGTACAATGAATATGGGGTACCACTTGGTGGGAATGGAGCGAAGTTGAAGTCTTTCATAGGGTCTTCAACACATTATCATGTCCCTATCATATATAAGACTTGGAAAAGTGTGCCTGAAGAATTGAAAGATAAGATATTCAATACAGTTGAGGCCGCATTCGTTATAGATCCAAAATCTAGGAAAAATATTCTCCAAACTACGGGCATTTCATTTCGTCAGTTTAAGAACTGGCTAACCACGAAATACATTATGCCGCACAAAGATGAGCCGCAACTCCTACAAGCTCCACCCGAAAAGTATTCATTTATTGATCAGAATCATTGGGAAGAATTTGTGAGTTCAAGATTGTGTGAGACTTTTCAGGAAAAAAGGCGATTACAACAAGATCGACGATCTAAGAACAAATACAACCATAGAATTTCGAGGAAAGGCTATGCCAATCTTATTGAAGAAATGTGTCCTCTACAAGTCGGGAACACCGAGTGTGGATATTACGTCATGAGGTTTATGAGGGAGATTGTGACTAGAGGAAGAATTGTCATCTCAGATTCGATTGACACACGAAGATCATACTCACAGATGGAGTTGGACGAGGTGCGAATTGAGTTGGCTGACTTTTTGGGTTCTTACATGTGA

Protein sequence

MTWMRTSQRTYDRIVKAHRYPHKILLASMDDLNKDLGSSELNVPLGIEEAEGENLGIASDTTKQKKRPRGPTIMFDVTRIRSLGDKKVVKYNEYGVPLGGNGAKLKSFIGSSTHYHVPIIYKTWKSVPEELKDKIFNTVEAAFVIDPKSRKNILQTTGISFRQFKNWLTTKYIMPHKDEPQLLQAPPEKYSFIDQNHWEEFVSSRLCETFQEKRRLQQDRRSKNKYNHRISRKGYANLIEEMCPLQVGNTECGYYVMRFMREIVTRGRIVISDSIDTRRSYSQMELDEVRIELADFLGSYM

Homology

[Close]

BLAST of PI0023782 vs. ExPASy TrEMBL
Match: A0A5D3E302 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00200 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-12
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 243 CPLQVGNTECGYYVMRFMREIVTRGRIVISDSIDTRRSYSQMELDE 289
           CPLQVG+T CGYYVM++MREIV RG IVISDSIDTR+SYSQ ELDE
Sbjct: 506 CPLQVGSTTCGYYVMKYMREIVNRGSIVISDSIDTRKSYSQAELDE 551

[Close]

BLAST of PI0023782 vs. NCBI nr
Match: TYK01338.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 339.0 bits (868), Expect = 4.3e-89
Identity = 169/238 (71.01%), Postives = 192/238 (80.67%), Query Frame = 0


Query: 29  MDDLNKDLGSSELNVPLGIEEAEGENLGIASDTTKQKKRPRGPTIMFDVTRIRSLGDKKV 88
           MDDLN+++G  ELN  +              +T K+ KR RGPTIMFDVTRIRSLGDKKV
Sbjct: 1   MDDLNEEVGVGELNATV-------------EETPKELKRRRGPTIMFDVTRIRSLGDKKV 60

Query: 89  VKYNEYGVPLGGNGAKLKSFIGSSTHYHVPIIYKTWKSVPEELKDKIFNTVEAAFVIDPK 148
           V+YNE G P+G NGAKLKSFIGS+THYHVPI Y +WKSVP ELKDKIF TVEAAFVIDP+
Sbjct: 61  VRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPR 120

Query: 149 SRKNILQTTGISFRQFKNWLTTKYIMPHKDEPQLLQAPPEKYSFIDQNHWEEFVSSRLCE 208
           SRKN+LQT GISFRQFKNWLTTKYI+PHKDEPQLLQ PPEKYSFI+QNHWEEFV SRL E
Sbjct: 121 SRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSE 180

Query: 209 TFQEKRRLQQDRRSKNKYNHRISRKGYANLIEEMCPLQVGNTECGYYVMRFMREIVTR 267
           TFQEKR+LQQDRRSKNKYNHRISRKGYANL EEM  + + NT+        + +++T+
Sbjct: 181 TFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEMDEISM-NTDSSSVNRHCLNDVLTQ 224

[Close]

BLAST of PI0023782 vs. NCBI nr
Match: TYK01338.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-18
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 243 CPLQVGNTECGYYVMRFMREIVTRGRIVISDSIDTRRSYSQMELDEVRIELADFLGSYM 302
           CPLQVG+T CGYYVM++MREIV RG IVISDSIDTR+SYSQ ELDEVR+EL +FLGSYM
Sbjct: 506 CPLQVGSTTCGYYVMKYMREIVNRGSIVISDSIDTRKSYSQAELDEVRVELVEFLGSYM 564

HSP 2 Score: 339.0 bits (868), Expect = 4.3e-89
Identity = 169/238 (71.01%), Postives = 192/238 (80.67%), Query Frame = 0


Query: 29  MDDLNKDLGSSELNVPLGIEEAEGENLGIASDTTKQKKRPRGPTIMFDVTRIRSLGDKKV 88
           MDDLN+++G  ELN  +              +T K+ KR RGPTIMFDVTRIRSLGDKKV
Sbjct: 1   MDDLNEEVGVGELNATV-------------EETPKELKRRRGPTIMFDVTRIRSLGDKKV 60

Query: 89  VKYNEYGVPLGGNGAKLKSFIGSSTHYHVPIIYKTWKSVPEELKDKIFNTVEAAFVIDPK 148
           V+YNE G P+G NGAKLKSFIGS+THYHVPI Y +WKSVP ELKDKIF TVEAAFVIDP+
Sbjct: 61  VRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPR 120

Query: 149 SRKNILQTTGISFRQFKNWLTTKYIMPHKDEPQLLQAPPEKYSFIDQNHWEEFVSSRLCE 208
           SRKN+LQT GISFRQFKNWLTTKYI+PHKDEPQLLQ PPEKYSFI+QNHWEEFV SRL E
Sbjct: 121 SRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSE 180

Query: 209 TFQEKRRLQQDRRSKNKYNHRISRKGYANLIEEMCPLQVGNTECGYYVMRFMREIVTR 267
           TFQEKR+LQQDRRSKNKYNHRISRKGYANL EEM  + + NT+        + +++T+
Sbjct: 181 TFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEMDEISM-NTDSSSVNRHCLNDVLTQ 224

[Close]

BLAST of PI0023782 vs. NCBI nr
Match: TYK24336.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK24781.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-18
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 243 CPLQVGNTECGYYVMRFMREIVTRGRIVISDSIDTRRSYSQMELDEVRIELADFLGSYM 302
           CPLQVG+T CGYYVM++MREIV RG IVISDSIDTR+SYSQ ELDEVR+EL +FLGSYM
Sbjct: 534 CPLQVGSTTCGYYVMKYMREIVNRGSIVISDSIDTRKSYSQAELDEVRVELVEFLGSYM 592

HSP 2 Score: 337.8 bits (865), Expect = 9.6e-89
Identity = 168/238 (70.59%), Postives = 192/238 (80.67%), Query Frame = 0


Query: 29  MDDLNKDLGSSELNVPLGIEEAEGENLGIASDTTKQKKRPRGPTIMFDVTRIRSLGDKKV 88
           MDDLN+++G  ELN  +              +T K+ KR RGPTIMFDVTRIRSLGDKKV
Sbjct: 1   MDDLNEEVGVGELNATV-------------EETPKELKRRRGPTIMFDVTRIRSLGDKKV 60

Query: 89  VKYNEYGVPLGGNGAKLKSFIGSSTHYHVPIIYKTWKSVPEELKDKIFNTVEAAFVIDPK 148
           V+YNE G P+G NGAKLKSFIGS+THYHVPI Y +WKS+P ELKDKIF TVEAAFVIDP+
Sbjct: 61  VRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWKSMPAELKDKIFTTVEAAFVIDPR 120

Query: 149 SRKNILQTTGISFRQFKNWLTTKYIMPHKDEPQLLQAPPEKYSFIDQNHWEEFVSSRLCE 208
           SRKN+LQT GISFRQFKNWLTTKYI+PHKDEPQLLQ PPEKYSFI+QNHWEEFV SRL E
Sbjct: 121 SRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSE 180

Query: 209 TFQEKRRLQQDRRSKNKYNHRISRKGYANLIEEMCPLQVGNTECGYYVMRFMREIVTR 267
           TFQEKR+LQQDRRSKNKYNHRISRKGYANL EEM  + + NT+        + +++T+
Sbjct: 181 TFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEMDEISM-NTDSSSVNRHCLNDVLTQ 224

[Close]

BLAST of PI0023782 vs. NCBI nr
Match: TYK29003.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 337.8 bits (865), Expect = 9.6e-89
Identity = 169/238 (71.01%), Postives = 191/238 (80.25%), Query Frame = 0


Query: 29  MDDLNKDLGSSELNVPLGIEEAEGENLGIASDTTKQKKRPRGPTIMFDVTRIRSLGDKKV 88
           MDDLN+++G  ELN  +              +T K+ KR RGPTIMFDVTRIRSLGDKKV
Sbjct: 1   MDDLNEEVGVGELNATV-------------EETLKELKRRRGPTIMFDVTRIRSLGDKKV 60

Query: 89  VKYNEYGVPLGGNGAKLKSFIGSSTHYHVPIIYKTWKSVPEELKDKIFNTVEAAFVIDPK 148
           V+YNE G P+G NGAKLKSFIGS+THYHVPI Y +WKSVP ELKDKIF TVEAAFVIDP+
Sbjct: 61  VRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPR 120

Query: 149 SRKNILQTTGISFRQFKNWLTTKYIMPHKDEPQLLQAPPEKYSFIDQNHWEEFVSSRLCE 208
           SRKN+LQT GISFRQFKNWLTTKYI+PHKDEPQLLQ PPEKYSFI+QNHWEEFV SRL E
Sbjct: 121 SRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSE 180

Query: 209 TFQEKRRLQQDRRSKNKYNHRISRKGYANLIEEMCPLQVGNTECGYYVMRFMREIVTR 267
           TFQEKR+LQQDRRSKNKYNHRISRKGYANL EEM  + + NT+          +++T+
Sbjct: 181 TFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEMDEISM-NTDSSSVNRHCSNDVLTQ 224

[Close]

BLAST of PI0023782 vs. NCBI nr
Match: TYK29003.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 3.2e-12
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 243 CPLQVGNTECGYYVMRFMREIVTRGRIVISDSIDTRRSYSQMELDE 289
           CPLQVG+T CGYYVM++MREIV RG IVISDSIDTR+SYSQ ELDE
Sbjct: 536 CPLQVGSTTCGYYVMKYMREIVNRGSIVISDSIDTRKSYSQAELDE 581

HSP 2 Score: 337.8 bits (865), Expect = 9.6e-89
Identity = 168/238 (70.59%), Postives = 192/238 (80.67%), Query Frame = 0


Query: 29  MDDLNKDLGSSELNVPLGIEEAEGENLGIASDTTKQKKRPRGPTIMFDVTRIRSLGDKKV 88
           MDDLN+++G  ELN  +              +T K+ KR RGPTIMFDVTRIRSLGDKKV
Sbjct: 1   MDDLNEEVGVGELNATV-------------EETPKELKRRRGPTIMFDVTRIRSLGDKKV 60

Query: 89  VKYNEYGVPLGGNGAKLKSFIGSSTHYHVPIIYKTWKSVPEELKDKIFNTVEAAFVIDPK 148
           V+YNE G P+G NGAKLKSFIGS+THYHVPI Y +WKS+P ELKDKIF TVEAAFVIDP+
Sbjct: 61  VRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWKSMPAELKDKIFTTVEAAFVIDPR 120

Query: 149 SRKNILQTTGISFRQFKNWLTTKYIMPHKDEPQLLQAPPEKYSFIDQNHWEEFVSSRLCE 208
           SRKN+LQT GISFRQFKNWLTTKYI+PHKDEPQLLQ PPEKYSFI+QNHWEEFV SRL E
Sbjct: 121 SRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSE 180

Query: 209 TFQEKRRLQQDRRSKNKYNHRISRKGYANLIEEMCPLQVGNTECGYYVMRFMREIVTR 267
           TFQEKR+LQQDRRSKNKYNHRISRKGYANL EEM  + + NT+        + +++T+
Sbjct: 181 TFQEKRKLQQDRRSKNKYNHRISRKGYANLKEEMDEISM-NTDSSSVNRHCLNDVLTQ 224

The following BLAST results are available for this feature:

BLAST of PI0023782 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E302	1.6e-12	82.61	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]

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BLAST of PI0023782 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01338.1	4.3e-89	71.01	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
TYK01338.1	1.4e-18	81.36	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
TYK24336.1	1.4e-18	81.36	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK247...	[more]
TYK29003.1	9.6e-89	71.01	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
TYK29003.1	3.2e-12	82.61	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]

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BLAST of PI0023782 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 56..245
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 213..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023782.1	PI0023782.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0016301	kinase activity