PI0023728 (gene) Melon (PI 482460) v1

Overview
NamePI0023728
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionjosephin-like protein
Locationchr08: 15254070 .. 15254648 (-)
RNA-Seq ExpressionPI0023728
SyntenyPI0023728
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTCACTCACTCCTAAATTACTCTCTCTCTTTTTTTTCTTCCTTCCCTCTCTCTCTCTTCAAATATCAAAACAAATTCCCAAAAAAAAAAATGTCAACAAAATTGAGCTCAGGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGCAGCGAAGTCAAGAAATAGGAAAAGGCCGATCATCGTGTTTTGGGTTTTTCGGCTGCCGAGATCCGGCAGATTCTCGCCGGAAAAGTTCCTCCGGCGGCTGGGAGCTAAAATGGCTAAAGTTCTACGATATGTTTCGTTGAGAAAGAGATCAACTTCTTCTAATTCGTCGTCTTTGAAAAATGGTACTTCGAAGTTCAACAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACCGAGCTGAAGCTGTCAAAGATTGTATTCAGTTCTTCAATTCTTCTAATTCTTCTTCAGCTGTTTGAATTTCTCTCTTTTTTTTTTTTTGATGTCGTGTAATTGTGTGAATGTAATTTCATGGTTCTTTTTCTTAGTTTTTGTTTCATAATCATTTTTCTTTTTTATTATAGAAAATAGTTTGTTTCCACTCA

mRNA sequence

TTTTTTCACTCACTCCTAAATTACTCTCTCTCTTTTTTTTCTTCCTTCCCTCTCTCTCTCTTCAAATATCAAAACAAATTCCCAAAAAAAAAAATGTCAACAAAATTGAGCTCAGGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGCAGCGAAGTCAAGAAATAGGAAAAGGCCGATCATCGTGTTTTGGGTTTTTCGGCTGCCGAGATCCGGCAGATTCTCGCCGGAAAAGTTCCTCCGGCGGCTGGGAGCTAAAATGGCTAAAGTTCTACGATATGTTTCGTTGAGAAAGAGATCAACTTCTTCTAATTCGTCGTCTTTGAAAAATGGTACTTCGAAGTTCAACAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACCGAGCTGAAGCTGTCAAAGATTGTATTCAGTTCTTCAATTCTTCTAATTCTTCTTCAGCTGTTTGAATTTCTCTCTTTTTTTTTTTTTGATGTCGTGTAATTGTGTGAATGTAATTTCATGGTTCTTTTTCTTAGTTTTTGTTTCATAATCATTTTTCTTTTTTATTATAGAAAATAGTTTGTTTCCACTCA

Coding sequence (CDS)

ATGTCAACAAAATTGAGCTCAGGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGCAGCGAAGTCAAGAAATAGGAAAAGGCCGATCATCGTGTTTTGGGTTTTTCGGCTGCCGAGATCCGGCAGATTCTCGCCGGAAAAGTTCCTCCGGCGGCTGGGAGCTAAAATGGCTAAAGTTCTACGATATGTTTCGTTGAGAAAGAGATCAACTTCTTCTAATTCGTCGTCTTTGAAAAATGGTACTTCGAAGTTCAACAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACCGAGCTGAAGCTGTCAAAGATTGTATTCAGTTCTTCAATTCTTCTAATTCTTCTTCAGCTGTTTGA

Protein sequence

MSTKLSSGRRVSFSSDQAAAKSRNRKRPIIVFWVFRLPRSGRFSPEKFLRRLGAKMAKVLRYVSLRKRSTSSNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSSSAV
Homology
BLAST of PI0023728 vs. ExPASy TrEMBL
Match: A0A0A0L2K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308510 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 115/123 (93.50%), Postives = 117/123 (95.12%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQ-AAAKSRNRKRPIIVFWVFRLPRSGRFSPEKFLRRLGAKMAKV 60
           MSTKLSSGRRVSFSSDQ AAAKSR RKRPIIVFWVFRLP+S RFSPEKFLRRLGAKMAKV
Sbjct: 1   MSTKLSSGRRVSFSSDQAAAAKSRIRKRPIIVFWVFRLPKSARFSPEKFLRRLGAKMAKV 60

Query: 61  LRYVSLRKRSTSS-NSSSLK--NGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS 120
           LRYVSLRKRSTSS NSSSLK  NG+SKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS
Sbjct: 61  LRYVSLRKRSTSSTNSSSLKNNNGSSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS 120

BLAST of PI0023728 vs. ExPASy TrEMBL
Match: A0A6J1GFL9 (josephin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453490 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.4e-34
Identity = 93/128 (72.66%), Postives = 103/128 (80.47%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQAAAKS----------RNRKRPIIVFWVFRLPRSGRFSPEKFLR 60
           MSTKLSS RRVSFSSDQ AA +          RNRKR I VFWVFRLP+SGR  P  FLR
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAATSAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLR 60

Query: 61  RLGAKMAKVLRYVSLRKRSTS-SNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQF 118
           R+GAK+ KVLRYVSLRKRS S ++SSSLK+G S FNRSHSVS+SMEESHRAEAVKDCI F
Sbjct: 61  RIGAKVVKVLRYVSLRKRSASPASSSSLKSG-SNFNRSHSVSESMEESHRAEAVKDCINF 120

BLAST of PI0023728 vs. ExPASy TrEMBL
Match: A0A6J1IJN3 (uncharacterized protein LOC111477703 OS=Cucurbita maxima OX=3661 GN=LOC111477703 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 92/128 (71.88%), Postives = 102/128 (79.69%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQAAAKS--------RNRKRPIIVFWVFRLPRSGRFSPEKFLRRL 60
           MSTKLSS RRVSFSSDQ AA +        RNRKR I VFWVF+LP+SGR  P  FLRR+
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAAAAKPAAFPRNRKRLITVFWVFQLPKSGRLFPGSFLRRI 60

Query: 61  GAKMAKVLRYVSLRKRSTS----SNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQ 117
           GAK+ KVLRYVSLRKRS S    S+SSSLK+G S FNRSHSVS+SMEESHRAEAVKDCI 
Sbjct: 61  GAKVVKVLRYVSLRKRSASPASCSSSSSLKSG-SNFNRSHSVSESMEESHRAEAVKDCIN 120

BLAST of PI0023728 vs. ExPASy TrEMBL
Match: A0A061EQH2 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021741 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 8.1e-13
Identity = 55/124 (44.35%), Postives = 82/124 (66.13%), Query Frame = 0

Query: 7   SGRRVSFSSD------------QAAAKSR-NRKRPIIVFWVFRLPRSGRFSPEKFLRRLG 66
           + +RVSFS D             +  ++R NR+R +   + FRL RS RFSP + LRRLG
Sbjct: 5   TSKRVSFSPDVNERPTILLKHGGSTGRTRGNRRRVVAGIFTFRLVRSSRFSPARLLRRLG 64

Query: 67  AKMAKVLRYVSLRKRSTSSNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSS 118
           AK+A+ LR+VS+R+   +SNS  + + +S   RS S+++S+ +SHRAEA++DCI+F NSS
Sbjct: 65  AKVARALRFVSMRR---NSNSHKVSSSSSNLARSRSLAESI-DSHRAEAIEDCIEFLNSS 124

BLAST of PI0023728 vs. ExPASy TrEMBL
Match: A5C5R3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g01950 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 6.9e-12
Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 0

Query: 7   SGRRVSFSSD-----------QAAAKSRNRKRPIIVFWVFRLPRSGRFSPEKFLRRLGAK 66
           + +RVSFS D              +++   +R + V W FRLPRS  FSP +FLRRLG +
Sbjct: 5   ASKRVSFSPDVNDKPTMLLKHGGCSRASGHRRRVAVIWSFRLPRSSSFSPARFLRRLGDR 64

Query: 67  MAKVLRYVSLRKRSTSSNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSS 114
           + + LR++S+R+RS+   SS      S   RS S+ D + +SHRAEA++DCI+F NSS
Sbjct: 65  VVRALRFMSMRRRSSRRVSS------SSLTRSRSLVDPI-DSHRAEAIEDCIEFLNSS 115

BLAST of PI0023728 vs. NCBI nr
Match: KGN54361.1 (hypothetical protein Csa_017994 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 2.3e-46
Identity = 115/123 (93.50%), Postives = 117/123 (95.12%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQ-AAAKSRNRKRPIIVFWVFRLPRSGRFSPEKFLRRLGAKMAKV 60
           MSTKLSSGRRVSFSSDQ AAAKSR RKRPIIVFWVFRLP+S RFSPEKFLRRLGAKMAKV
Sbjct: 1   MSTKLSSGRRVSFSSDQAAAAKSRIRKRPIIVFWVFRLPKSARFSPEKFLRRLGAKMAKV 60

Query: 61  LRYVSLRKRSTSS-NSSSLK--NGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS 120
           LRYVSLRKRSTSS NSSSLK  NG+SKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS
Sbjct: 61  LRYVSLRKRSTSSTNSSSLKNNNGSSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS 120

BLAST of PI0023728 vs. NCBI nr
Match: XP_022950374.1 (josephin-like protein [Cucurbita moschata])

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33
Identity = 93/128 (72.66%), Postives = 103/128 (80.47%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQAAAKS----------RNRKRPIIVFWVFRLPRSGRFSPEKFLR 60
           MSTKLSS RRVSFSSDQ AA +          RNRKR I VFWVFRLP+SGR  P  FLR
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAATSAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLR 60

Query: 61  RLGAKMAKVLRYVSLRKRSTS-SNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQF 118
           R+GAK+ KVLRYVSLRKRS S ++SSSLK+G S FNRSHSVS+SMEESHRAEAVKDCI F
Sbjct: 61  RIGAKVVKVLRYVSLRKRSASPASSSSLKSG-SNFNRSHSVSESMEESHRAEAVKDCINF 120

BLAST of PI0023728 vs. NCBI nr
Match: KAG6603596.1 (hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 94/133 (70.68%), Postives = 104/133 (78.20%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQAAAKS---------RNRKRPIIVFWVFRLPRSGRFSPEKFLRR 60
           MSTKLSS RRVSFSSDQ AA +         RNRKR I VFWVFRLP+SGR  P  FLRR
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAASAAKPAAFPRNRKRLITVFWVFRLPKSGRLFPGSFLRR 60

Query: 61  LGAKMAKVLRYVSLRKR-------STSSNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVK 118
           +GAK+ KVLRYVSLRKR       S+SS+SSSLK+G S FNRSHSVS+SMEESHRAEAVK
Sbjct: 61  IGAKVVKVLRYVSLRKRSASPASCSSSSSSSSLKSG-SNFNRSHSVSESMEESHRAEAVK 120

BLAST of PI0023728 vs. NCBI nr
Match: XP_022977351.1 (uncharacterized protein LOC111477703 [Cucurbita maxima])

HSP 1 Score: 151.4 bits (381), Expect = 5.0e-33
Identity = 92/128 (71.88%), Postives = 102/128 (79.69%), Query Frame = 0

Query: 1   MSTKLSSGRRVSFSSDQAAAKS--------RNRKRPIIVFWVFRLPRSGRFSPEKFLRRL 60
           MSTKLSS RRVSFSSDQ AA +        RNRKR I VFWVF+LP+SGR  P  FLRR+
Sbjct: 1   MSTKLSSSRRVSFSSDQGAAAAAAKPAAFPRNRKRLITVFWVFQLPKSGRLFPGSFLRRI 60

Query: 61  GAKMAKVLRYVSLRKRSTS----SNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQ 117
           GAK+ KVLRYVSLRKRS S    S+SSSLK+G S FNRSHSVS+SMEESHRAEAVKDCI 
Sbjct: 61  GAKVVKVLRYVSLRKRSASPASCSSSSSLKSG-SNFNRSHSVSESMEESHRAEAVKDCIN 120

BLAST of PI0023728 vs. NCBI nr
Match: XP_023518083.1 (uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29
Identity = 80/119 (67.23%), Postives = 92/119 (77.31%), Query Frame = 0

Query: 3   TKLSSGRRVSFSSDQAAAK----SRNRKRPIIVFWVFRLPRSGRFSPEKFLRRLGAKMAK 62
           +K+ S R VS  SD+  AK     RNRKR I V WVFRLP+SGRFSPE FLRR+GAK+AK
Sbjct: 2   SKIRSSRGVSLRSDEGTAKPTTLQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAK 61

Query: 63  VLRYVSLRKRSTSSNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSSS 118
           V+RYVSL+KRS  S  +S     + FNRSHSVSDSMEESHRAEAVKDCI FFNSS+SS+
Sbjct: 62  VVRYVSLKKRSECSKKAS---AATNFNRSHSVSDSMEESHRAEAVKDCIHFFNSSSSSA 117

BLAST of PI0023728 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 4.6e-08
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 0

Query: 13  FSSDQAAAKSRNRKRPIIVFWVFRLPRSGRFSPEKFLRRLGAKMAKVLRYVSLRKRSTS- 72
           F      + S + +R +++  +         +  K ++R+GA+ AK LR++S R+ +T  
Sbjct: 23  FPKHDGLSSSHHSRRRVVLVGILSFGLRSSPAARKLIQRIGARFAKTLRFISFRRNTTDR 82

Query: 73  ---------SNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSS 114
                    S+SSS  +      RS SV+++  ESHRAEA++DCI+F NSS
Sbjct: 83  RKTSSFLLPSSSSSSSSSAIYMKRSKSVNET--ESHRAEAIEDCIEFLNSS 131

BLAST of PI0023728 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = 0

Query: 7   SGRRVSFSSDQAA---------AKSRNRKRPIIVFWVFRLPRS-GRFSPEKFLRRLGAKM 66
           + +RV FS D  A         + SR+ +R ++V  +F    S    + ++ LR +G ++
Sbjct: 5   ASKRVRFSPDPEANDELIFPTHSSSRHGRRRVVV-GIFSFSFSDSPATTKRLLRSIGDRV 64

Query: 67  AKVLRYVSLRKRSTSSNSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNSS 118
            K  RY+S  + +T +  SS  N +S      S S +  ESHRAEA++DCI+F NS +S 
Sbjct: 65  GKTFRYISFGRMNTKTTPSSSSNVSSSLYLMKSKSLNGSESHRAEAIEDCIEFLNSCSSL 124

BLAST of PI0023728 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related )

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-05
Identity = 38/103 (36.89%), Postives = 51/103 (49.51%), Query Frame = 0

Query: 14  SSDQAAAKSRNRKRP-IIVFWVFRLPRSGRFSPEKFLRRLGAKMAKVLRYVSLRKRSTSS 73
           S+ Q A K    K P        RLPR    +  K ++ LG K AK LR V +RK+  S 
Sbjct: 21  SAKQTAIKGPYGKSPGCTTSCGLRLPRKTEVTAAKLIKHLGCKFAKGLRLVVMRKKKRSP 80

Query: 74  NSSSLKNGTSKFNRSHSVSDSMEESHRAEAVKDCIQFFNSSNS 116
            S   K  +        +     +SHR+EA++DCIQF NSS+S
Sbjct: 81  PS---KVSSFSGRSQPPIIPINNDSHRSEAIEDCIQFINSSSS 120

BLAST of PI0023728 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein )

HSP 1 Score: 40.8 bits (94), Expect = 8.9e-04
Identity = 26/80 (32.50%), Postives = 43/80 (53.75%), Query Frame = 0

Query: 36  RLPRSGRFSPEKFLRRLGAKMAKVLRYVSLRKRSTSSNSSSLKNGTSKFNRSHSVSDSME 95
           RLPR    +  + ++ L  K    LR V +RK+    +    K  +S  ++   +S   +
Sbjct: 269 RLPRKTECTAARLIKDLSCKFVMGLRLVVMRKKKKKRSPPLKKASSSGISQPSVISVVND 328

Query: 96  ESHRAEAVKDCIQFFNSSNS 116
            +HR+ A++DCIQF NSS+S
Sbjct: 329 NNHRSAAIEDCIQFINSSSS 348

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L2K71.1e-4693.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308510 PE=4 SV=1[more]
A0A6J1GFL96.4e-3472.66josephin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453490 PE=4 SV=1[more]
A0A6J1IJN32.4e-3371.88uncharacterized protein LOC111477703 OS=Cucurbita maxima OX=3661 GN=LOC111477703... [more]
A0A061EQH28.1e-1344.35Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021741 PE=4 SV=1[more]
A5C5R36.9e-1242.37Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g01950 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
KGN54361.12.3e-4693.50hypothetical protein Csa_017994 [Cucumis sativus][more]
XP_022950374.11.3e-3372.66josephin-like protein [Cucurbita moschata][more]
KAG6603596.11.7e-3370.68hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022977351.15.0e-3371.88uncharacterized protein LOC111477703 [Cucurbita maxima][more]
XP_023518083.12.6e-2967.23uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT3G09032.14.6e-0832.43unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G01225.11.1e-0633.88unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G07300.11.2e-0536.89josephin protein-related [more]
AT2G29640.18.9e-0432.50JOSEPHIN-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availablePANTHERPTHR34355:SF1JOSEPHIN-LIKE PROTEINcoord: 2..117
NoneNo IPR availablePANTHERPTHR34355JOSEPHIN-LIKE PROTEINcoord: 2..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023728.1PI0023728.1mRNA