PI0023700 (gene) Melon (PI 482460) v1

Overview
NamePI0023700
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPlant transposase
Locationchr08: 7165723 .. 7166568 (-)
RNA-Seq ExpressionPI0023700
SyntenyPI0023700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCTTCGAGTAGTATAATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGATCATGGTTATGTACGAGGATTAGGATTTGGTGTGACTAGATCGAAGGTGTCTACATCAATTCAGAAAGATAAAACCATTGCACCTCTTGAAAGAAAATGTAACAACCTAACCTCAAATGTAGATAAGCTAAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGGTAAATTTGTCCTAACACTCTTAAAAGTTTTTAAACTATGTTTTATAGCTCATTTTGACATTGTTGTTTCTATAGGAAAAAATAAGTGAACAAAATTCGAATAATCCTGTTAGAGTACCAGCATCGACAGATATTCCTACTCGAATCATAAATTCCCCACAGGTAAATTCATTTGTAACTTTTTTGTTCCTTTATTATTTTAAATTGTTACTATTTGAGATTTTTCTAACCATATTATTGTTGAAAAAGAGTGTTACTACCAACACTCTCCATAAGTGTTTGCTGCTAGATTGGCTTGGTTCAGGAGAAGTGATTGCTTAAAGTAGATGGTCTTCCAATGATCCATCAATTCTTGTCCACCATGTACCTCTTGGCCCAAATGCAATTAGTGTGTGGGTTGATACAGTGAAAATATCAAATTCCTTCTTATGGAGGTCTACCTCTGATATTATTGTTATTGACGATGATGTGGGCACTACTGTAGCATGGTCAATGGAAAAAGTCAAATTATGTAAGAAATTTTATTTACTTTGTGAATTAGGTATTTATTTAGTTCATTAACTAATTTATTGTTAGAGTTAGATAATAATATTTCTTTTTATTTTTTATTAGGTGATTAATATGTGA

mRNA sequence

ATGCCTTCTTCGAGTAGTATAATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGATCATGGTTATGTACGAGGATTAGGATTTGGTGTGACTAGATCGAAGGTGTCTACATCAATTCAGAAAGATAAAACCATTGCACCTCTTGAAAGAAAATGTAACAACCTAACCTCAAATGTAGATAAGCTAAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGGAAAAAATAAGTGAACAAAATTCGAATAATCCTGTTAGAGTACCAGCATCGACAGATATTCCTACTCGAATCATAAATTCCCCACAGGTGATTAATATGTGA

Coding sequence (CDS)

ATGCCTTCTTCGAGTAGTATAATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGATCATGGTTATGTACGAGGATTAGGATTTGGTGTGACTAGATCGAAGGTGTCTACATCAATTCAGAAAGATAAAACCATTGCACCTCTTGAAAGAAAATGTAACAACCTAACCTCAAATGTAGATAAGCTAAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGGAAAAAATAAGTGAACAAAATTCGAATAATCCTGTTAGAGTACCAGCATCGACAGATATTCCTACTCGAATCATAAATTCCCCACAGGTGATTAATATGTGA

Protein sequence

MPSSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKLKSVVASLLKDKEKISEQNSNNPVRVPASTDIPTRIINSPQVINM
Homology
[Close]
BLAST of PI0023700 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.8e-30
Identity = 80/104 (76.92%), Postives = 88/104 (84.62%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV GPD  YVRGLGFGVT SKVSTSIQKDKTI  LE+KC+NLTS+VD+L
Sbjct: 320 SSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDEL 379

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPASTDI----PTRIINSP 102
           KSVVASLLKDKEK S+ NSN+ V RVP+ST I    PT IINSP
Sbjct: 380 KSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSP 423

[Close]
BLAST of PI0023700 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.5e-30
Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV GPD  YVRGLGFGVT SKVSTSIQKDKTI  LE+KC+NLTS+VD+L
Sbjct: 320 SSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDEL 379

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPAS----TDIPTRIINSP 102
           KSVVASLLKDKEK S+ NSN+ V RVP+S    T  PT IINSP
Sbjct: 380 KSVVASLLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSP 423

[Close]
BLAST of PI0023700 vs. ExPASy TrEMBL
Match: A0A5A7UVF2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003770 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.2e-29
Identity = 78/104 (75.00%), Postives = 86/104 (82.69%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV GPD  YVRGLGFGVT SKVSTSIQKDKTI  LE+KC+NLTS+VD+L
Sbjct: 320 SSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDEL 379

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPAS----TDIPTRIINSP 102
           KSVVAS LKDKEK S+ NSN+ V RVP+S    T  PT IINSP
Sbjct: 380 KSVVASSLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSP 423

[Close]
BLAST of PI0023700 vs. ExPASy TrEMBL
Match: A0A5D3DYN2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002050 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.5e-29
Identity = 78/104 (75.00%), Postives = 86/104 (82.69%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV G D GYVRGLGFGVT SKVSTSI KDKTI  LE+KC+NLTS+VD+L
Sbjct: 104 SSSSIIDDAISRVLGSDQGYVRGLGFGVTLSKVSTSIHKDKTITSLEKKCDNLTSDVDEL 163

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPAS----TDIPTRIINSP 102
           KSVVASLLKDKEK S+ NSN+ V RVP+S    T  PT IINSP
Sbjct: 164 KSVVASLLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSP 207

[Close]
BLAST of PI0023700 vs. ExPASy TrEMBL
Match: A0A5D3DH39 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001040 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.5e-29
Identity = 78/104 (75.00%), Postives = 85/104 (81.73%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV GPD GYVRGLGFGV  SKVSTSI KDKTI  LERKC+NLTS+VD+L
Sbjct: 96  SSSSIIDDAISRVLGPDQGYVRGLGFGVALSKVSTSIHKDKTITSLERKCDNLTSDVDEL 155

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPAS----TDIPTRIINSP 102
           KSVVAS LKDKEK S+ NSN+ V RVP+S    T  PT IINSP
Sbjct: 156 KSVVASSLKDKEKTSDDNSNHLVKRVPSSAHIRTHTPTPIINSP 199

[Close]
BLAST of PI0023700 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 140.6 bits (353), Expect = 7.9e-30
Identity = 80/104 (76.92%), Postives = 88/104 (84.62%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV GPD  YVRGLGFGVT SKVSTSIQKDKTI  LE+KC+NLTS+VD+L
Sbjct: 320 SSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDEL 379

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPASTDI----PTRIINSP 102
           KSVVASLLKDKEK S+ NSN+ V RVP+ST I    PT IINSP
Sbjct: 380 KSVVASLLKDKEKTSDDNSNHLVKRVPSSTHIRTPTPTPIINSP 423

[Close]
BLAST of PI0023700 vs. NCBI nr
Match: KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV GPD  YVRGLGFGVT SKVSTSIQKDKTI  LE+KC+NLTS+VD+L
Sbjct: 320 SSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDEL 379

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPAS----TDIPTRIINSP 102
           KSVVASLLKDKEK S+ NSN+ V RVP+S    T  PT IINSP
Sbjct: 380 KSVVASLLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSP 423

[Close]
BLAST of PI0023700 vs. NCBI nr
Match: KAA0057491.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 8.7e-29
Identity = 78/104 (75.00%), Postives = 86/104 (82.69%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV GPD  YVRGLGFGVT SKVSTSIQKDKTI  LE+KC+NLTS+VD+L
Sbjct: 320 SSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDEL 379

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPAS----TDIPTRIINSP 102
           KSVVAS LKDKEK S+ NSN+ V RVP+S    T  PT IINSP
Sbjct: 380 KSVVASSLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSP 423

[Close]
BLAST of PI0023700 vs. NCBI nr
Match: TYK22660.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 78/104 (75.00%), Postives = 85/104 (81.73%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV GPD GYVRGLGFGV  SKVSTSI KDKTI  LERKC+NLTS+VD+L
Sbjct: 96  SSSSIIDDAISRVLGPDQGYVRGLGFGVALSKVSTSIHKDKTITSLERKCDNLTSDVDEL 155

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPAS----TDIPTRIINSP 102
           KSVVAS LKDKEK S+ NSN+ V RVP+S    T  PT IINSP
Sbjct: 156 KSVVASSLKDKEKTSDDNSNHLVKRVPSSAHIRTHTPTPIINSP 199

[Close]
BLAST of PI0023700 vs. NCBI nr
Match: TYK28558.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 78/104 (75.00%), Postives = 86/104 (82.69%), Query Frame = 0 

Query: 3   SSSSIIEDAISRVFGPDHGYVRGLGFGVTRSKVSTSIQKDKTIAPLERKCNNLTSNVDKL 62
           SSSSII+DAISRV G D GYVRGLGFGVT SKVSTSI KDKTI  LE+KC+NLTS+VD+L
Sbjct: 104 SSSSIIDDAISRVLGSDQGYVRGLGFGVTLSKVSTSIHKDKTITSLEKKCDNLTSDVDEL 163

Query: 63  KSVVASLLKDKEKISEQNSNNPV-RVPAS----TDIPTRIINSP 102
           KSVVASLLKDKEK S+ NSN+ V RVP+S    T  PT IINSP
Sbjct: 164 KSVVASLLKDKEKTSDDNSNHLVKRVPSSAHIRTPTPTPIINSP 207

The following BLAST results are available for this feature:
BLAST of PI0023700 vs.
Match NameE-valueIdentityDescription
BLAST of PI0023700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SRN73.8e-3076.92Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... [more]
A0A5A7TLJ28.5e-3075.96Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003... [more]
A0A5A7UVF24.2e-2975.00Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00... [more]
A0A5D3DYN25.5e-2975.00Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00... [more]
A0A5D3DH395.5e-2975.00Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00... [more]
BLAST of PI0023700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032201.17.9e-3076.92Plant transposase [Cucumis melo var. makuwa][more]
KAA0042856.11.8e-2975.96Plant transposase [Cucumis melo var. makuwa][more]
KAA0057491.18.7e-2975.00Plant transposase [Cucumis melo var. makuwa][more]
TYK22660.11.1e-2875.00Plant transposase [Cucumis melo var. makuwa][more]
TYK28558.11.1e-2875.00Plant transposase [Cucumis melo var. makuwa][more]
BLAST of PI0023700 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023700.1PI0023700.1mRNA