PI0023663 (gene) Melon (PI 482460) v1

Overview
NamePI0023663
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 22270841 .. 22272942 (+)
RNA-Seq ExpressionPI0023663
SyntenyPI0023663
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAACTGGCTAAGCCGGTGCGATCGGAATCAACGGTCGTGATATTGGTCTTCAAAATCGACGACTTTTTTGTTTTAGCATCTTTCACAGGTTCAGACGGACCAGACGCCATTGCTTTATTTATATGAGACAAGAAGTACTTTCTTTTTTTAAGTCAAATTTTATTTGGCTTTTCTAAGTCAGGGTTTGTGCGAGGTAAGCATTTGCATGTAGTTTTTGTTTCATCAAAGGTCTTACTATAGTTTTTTGTGGACGTTCTACCTTCACACATTTGAATTTGATAGGAGTTCATTATTTAGGTCAAGAAGCTAGATTTTTTAATGTTGTGATTCAATTTCTATGGACCTATCAACGAAGTATTATAATTTTAACATTTGAAAATTTGATTTGTTGGATGACCATCAATCAATTTTAGTTTTTTAAATTGAAAATTTGGTTAGATTTATTGTAATTTGTAATGAATGAAAACTTAAAACAACAAAATTGGTAGTATGAATGAAGTTTTATTATGGAGGATGAAAAGCAAATCACCATCCTTTTCACATGTTGGATTTTGTTTCAATTTAACTACAACCATTTTCATGTTACCAAAGAAAGAAAAACTTTTATGGTGGAGTTATAAAGTTGATTTATGGTGGTGTTATAAAGTTTACCCAGTAGAGTTTGTACTTAAAAAGGCTGAGTTTTGGTTTGGTGGTGGACTAAGTCTACTAGGATTTGGCTTTAAAGAAAAGAATTATTTTTTTTTTTCTGGAAAACTCCCAGCCGTCACTTCCGTCTCACGATCTCTCTCTCCCTGATCACTCTCAGGTCTCAGCATCTCTCTCTCTCTCTCTCTCAATCCCATTTCCCTCTCTCTCGCTCGCTCGACTCCCTCACTCCGGCTGCCGCTCCCCCTGCACCGCCATCTCCGTTCATATTACGAGAGAACTGCTCTCTCTCTCTCGAATTGTGTCTACAGCTCCGCTCTGTGCCGTCGTACCTCAGGTCGCCGTCTCACCTTCGGTCGCCACACACAGCATCATCCCTCCACGATTCCATCTGCGGCTCTCACATCCCGATCAGGCGACGGCAAGGCTGCTCCGACGCTCACATACTTTCCCGGCGAGTGAAGTTGTGATTTTTGGGTCTCCAAACACTTTAGTCTCGTGACCCACTATCCAAAAGATCTTGTATTCGTTTACGATCCAGCGAGCCTGGAACGGTGAAATCAAGTCGTTTCGTAGTCAATCCAGCAAGGATTCAGATTGTGTTGGGCGAGTTTCCGTTGGTAATAACCGTTCCTTTAGTCTTTTCAAGTTTGAATGAGTTTTAATTTAGGTCCTAATTCTGGAATTTTCTTGGGTGAGTTTAGATTAAATATATTAAGGCGTAAGACTATCTTCAAGAGCGAGATCGTCTGTGTGAAGCTAGGCTCCATGTCTTAAGCTTTAGTATTGATCTCTTCAGGTCACTAATTTACTTTCAGAATTGTTTTAGTTTGGGCCAAGGTTCCCGTAGCCCAAGAAAAAACTTAACTTTGTTGAGTTGAGGTGAGTGGCACCACTACTACTAAAATGCCGTAGTGTCAGGGGAAAATTATTTAAGGATGTTTTTGGTAGGCCAAAAAGAATGTTATGTGTGATTTATCTAAATTGAGAATACGTTTTTTTTTGTGATTTACTATGCAAGTTTAAGAACGATATTCATGACCAGGTGTGCTTTAGCATCACCAAAATGTTATGTGAATTTATGTTGGAATTTATGCATATATGTGTTGCATGAAATTAGGGATGTAAGTTCAATAGCTCTAAGTGAAATCGACGTGCTTAGAATTTTTGCGGTATCCATGCATGAAATTGATACATATCCATTGGGTTCAATGTCTATGAAATTGATGTACATTGAACTAATGTTGTGAAATTGATACATATCCTGGAAAATGGAAACATAGTGAAAGCCAAGAAGACAATTCTTTAGATCTCACTAGTTTAAAGTTATTTAGCTTATATTTGCCTTAGATTGCTACCCCAATTGTAAGATTACTTGCTCGTTATTTTTAATGCTCCATCACTTTCTTTCTAAAAATTTGTAGGTAAAGACACAAAAGAATGTATAG

mRNA sequence

ATGAAACAACTGGCTAAGCCGGTGCGATCGGAATCAACGGTCGTGATATTGGTCTTCAAAATCGACGACTTTTTTGTTTTAGCATCTTTCACAGAATTATTTTTTTTTTTCTGGAAAACTCCCAGCCGTCACTTCCGTCTCACGATCTCTCTCTCCCTGATCACTCTCAGGTCTCAGCATCTCTCTCTCTCTCTCTCTCAATCCCATTTCCCTCTCTCTCGCTCGCTCGACTCCCTCACTCCGGCTGCCGCTCCCCCTGCACCGCCATCTCCGTTCATATTACGAGAGAACTGCTCTCTCTCTCTCGAATTGTGTCTACAGCTCCGCTCTGTGCCGTCGTACCTCAGGTCGCCGTCTCACCTTCGGTCGCCACACACAGCATCATCCCTCCACGATTCCATCTGCGGCTCTCACATCCCGATCAGGCGACGGCAAGGCTGCTCCGACGCTCACATACTTTCCCGGCGAGTGAACGAGCCTGGAACGGTGAAATCAAGTCGTTTCGTAGTCAATCCAGCAAGGATTCAGATTGTGTTGGGCGAGTTTCCGTTGGTAAAGACACAAAAGAATGTATAG

Coding sequence (CDS)

ATGAAACAACTGGCTAAGCCGGTGCGATCGGAATCAACGGTCGTGATATTGGTCTTCAAAATCGACGACTTTTTTGTTTTAGCATCTTTCACAGAATTATTTTTTTTTTTCTGGAAAACTCCCAGCCGTCACTTCCGTCTCACGATCTCTCTCTCCCTGATCACTCTCAGGTCTCAGCATCTCTCTCTCTCTCTCTCTCAATCCCATTTCCCTCTCTCTCGCTCGCTCGACTCCCTCACTCCGGCTGCCGCTCCCCCTGCACCGCCATCTCCGTTCATATTACGAGAGAACTGCTCTCTCTCTCTCGAATTGTGTCTACAGCTCCGCTCTGTGCCGTCGTACCTCAGGTCGCCGTCTCACCTTCGGTCGCCACACACAGCATCATCCCTCCACGATTCCATCTGCGGCTCTCACATCCCGATCAGGCGACGGCAAGGCTGCTCCGACGCTCACATACTTTCCCGGCGAGTGAACGAGCCTGGAACGGTGAAATCAAGTCGTTTCGTAGTCAATCCAGCAAGGATTCAGATTGTGTTGGGCGAGTTTCCGTTGGTAAAGACACAAAAGAATGTATAG

Protein sequence

MKQLAKPVRSESTVVILVFKIDDFFVLASFTELFFFFWKTPSRHFRLTISLSLITLRSQHLSLSLSQSHFPLSRSLDSLTPAAAPPAPPSPFILRENCSLSLELCLQLRSVPSYLRSPSHLRSPHTASSLHDSICGSHIPIRRRQGCSDAHILSRRVNEPGTVKSSRFVVNPARIQIVLGEFPLVKTQKNV
Homology
[Close]
BLAST of PI0023663 vs. ExPASy TrEMBL
Match: A0A0A0LFK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734190 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 7.4e-32
Identity = 114/209 (54.55%), Postives = 123/209 (58.85%), Query Frame = 0 

Query: 1   MKQLAKPVRSESTVVILVFKIDDFFVLASFTELFFFFWKTPSRHFRLTISLSLITLRSQH 60
           M+Q  KPVR ESTVVI   +    FVLASFT +             ++ SLSLITLRSQH
Sbjct: 1   MEQPIKPVRLESTVVI-GLQNRRLFVLASFTAV-----------TSVSRSLSLITLRSQH 60

Query: 61  LSLSLSQSHFPLSRSLDSLTPAAAPPAPPSPFILRENCSL----SLELCLQLRS---VPS 120
             LSLS+SHFPLS SLDSLTPAAAPPAPP PFI RENCSL    SLELCLQLR    VP 
Sbjct: 61  --LSLSRSHFPLSLSLDSLTPAAAPPAPPYPFISRENCSLSLSTSLELCLQLRPAPVVPQ 120

Query: 121 YLRSPS-----------HLRSPHTASSLHDSICGSHIPIRRRQGCSDAHILSRRVNEPGT 180
              SPS           HLR  H   +    +  SH               +R   E GT
Sbjct: 121 VAVSPSVAARSIIPPRFHLRLSHPDQATARLLRRSH---------------TRPGEELGT 180

Query: 181 VKSSRFVVNPARIQIVLGEFPLVKTQKNV 192
           VKSS FVVN ARIQIVLGEF LVKTQKNV
Sbjct: 181 VKSSPFVVNQARIQIVLGEFSLVKTQKNV 180

[Close]
BLAST of PI0023663 vs. NCBI nr
Match: KGN58866.1 (hypothetical protein Csa_001142 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-31
Identity = 114/209 (54.55%), Postives = 123/209 (58.85%), Query Frame = 0 

Query: 1   MKQLAKPVRSESTVVILVFKIDDFFVLASFTELFFFFWKTPSRHFRLTISLSLITLRSQH 60
           M+Q  KPVR ESTVVI   +    FVLASFT +             ++ SLSLITLRSQH
Sbjct: 1   MEQPIKPVRLESTVVI-GLQNRRLFVLASFTAV-----------TSVSRSLSLITLRSQH 60

Query: 61  LSLSLSQSHFPLSRSLDSLTPAAAPPAPPSPFILRENCSL----SLELCLQLRS---VPS 120
             LSLS+SHFPLS SLDSLTPAAAPPAPP PFI RENCSL    SLELCLQLR    VP 
Sbjct: 61  --LSLSRSHFPLSLSLDSLTPAAAPPAPPYPFISRENCSLSLSTSLELCLQLRPAPVVPQ 120

Query: 121 YLRSPS-----------HLRSPHTASSLHDSICGSHIPIRRRQGCSDAHILSRRVNEPGT 180
              SPS           HLR  H   +    +  SH               +R   E GT
Sbjct: 121 VAVSPSVAARSIIPPRFHLRLSHPDQATARLLRRSH---------------TRPGEELGT 180

Query: 181 VKSSRFVVNPARIQIVLGEFPLVKTQKNV 192
           VKSS FVVN ARIQIVLGEF LVKTQKNV
Sbjct: 181 VKSSPFVVNQARIQIVLGEFSLVKTQKNV 180

The following BLAST results are available for this feature:
BLAST of PI0023663 vs.
Match NameE-valueIdentityDescription
BLAST of PI0023663 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFK07.4e-3254.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734190 PE=4 SV=1[more]
BLAST of PI0023663 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58866.11.5e-3154.55hypothetical protein Csa_001142 [Cucumis sativus][more]
BLAST of PI0023663 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023663.1PI0023663.1mRNA