PI0023600 (gene) Melon (PI 482460) v1

Overview
NamePI0023600
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 14934169 .. 14934705 (-)
RNA-Seq ExpressionPI0023600
SyntenyPI0023600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATGAACAACCGCGCAGAGGAAAGAAACAAGGCAGTCACCAGCGGCCAGAGAAAGAAGAAGGTTAGGTTTCGAGAAAATCAGTTACGGGAAGAGGAAATGGAGACGAAGTGCGTGGGTGGTAGTCGTCCTGAGGCACAAATGAAATTTGTTGGAATAAAGATGGTGACGAAGTCGCAAGTGGGACTGGAAATCTTCACAAAGGATGCTTTGAAATTTGCAGACGGAGTCGAGCAACTATGGACGAGGAAGAAAGCTTGGAAAGGAAGGAGAAGTTTTCGTGAAGAAGAAGGAAAAATTCTTCCTATTCACGTGAAGTTTCAGATAGTGGGGCCAGGAATTAGAGACACTGCAGTGATAATTCTGGTATATTTAATGGGCTGGAACTACATGAAAAGGCCCAAAATTCCTCAAATGGACTTAGCTTATGTGGAGAAATTGGGGCCCAAATTTTTTGTGAAGGTTGGATTGGTAATAAATGGCAGGAAAAACAAATTGGGGGCTGGAAGAAGGATTGGCACACGCAAACTTTAA

mRNA sequence

ATGGTGATGAACAACCGCGCAGAGGAAAGAAACAAGGCAGTCACCAGCGGCCAGAGAAAGAAGAAGGTTAGGTTTCGAGAAAATCAGTTACGGGAAGAGGAAATGGAGACGAAGTGCGTGGGTGGTAGTCGTCCTGAGGCACAAATGAAATTTGTTGGAATAAAGATGGTGACGAAGTCGCAAGTGGGACTGGAAATCTTCACAAAGGATGCTTTGAAATTTGCAGACGGAGTCGAGCAACTATGGACGAGGAAGAAAGCTTGGAAAGGAAGGAGAAGTTTTCGTGAAGAAGAAGGAAAAATTCTTCCTATTCACGTGAAGTTTCAGATAGTGGGGCCAGGAATTAGAGACACTGCAGTGATAATTCTGGTTGGATTGGTAATAAATGGCAGGAAAAACAAATTGGGGGCTGGAAGAAGGATTGGCACACGCAAACTTTAA

Coding sequence (CDS)

ATGGTGATGAACAACCGCGCAGAGGAAAGAAACAAGGCAGTCACCAGCGGCCAGAGAAAGAAGAAGGTTAGGTTTCGAGAAAATCAGTTACGGGAAGAGGAAATGGAGACGAAGTGCGTGGGTGGTAGTCGTCCTGAGGCACAAATGAAATTTGTTGGAATAAAGATGGTGACGAAGTCGCAAGTGGGACTGGAAATCTTCACAAAGGATGCTTTGAAATTTGCAGACGGAGTCGAGCAACTATGGACGAGGAAGAAAGCTTGGAAAGGAAGGAGAAGTTTTCGTGAAGAAGAAGGAAAAATTCTTCCTATTCACGTGAAGTTTCAGATAGTGGGGCCAGGAATTAGAGACACTGCAGTGATAATTCTGGTTGGATTGGTAATAAATGGCAGGAAAAACAAATTGGGGGCTGGAAGAAGGATTGGCACACGCAAACTTTAA

Protein sequence

MVMNNRAEERNKAVTSGQRKKKVRFRENQLREEEMETKCVGGSRPEAQMKFVGIKMVTKSQVGLEIFTKDALKFADGVEQLWTRKKAWKGRRSFREEEGKILPIHVKFQIVGPGIRDTAVIILVGLVINGRKNKLGAGRRIGTRKL
Homology
[Close]
BLAST of PI0023600 vs. ExPASy TrEMBL
Match: A0A5D3BPQ3 (Putative acyl-activating enzyme 19 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00050 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.8e-04
Identity = 38/98 (38.78%), Postives = 57/98 (58.16%), Query Frame = 0 

Query: 1   MVMNNRAEERNK--------AVTSGQRKKKVRFRENQLREEEMETKCVGGSRPEAQMKFV 60
           M  N   E R++        ++ +G+R++ V  + N    +    +CVGGS+ +A+M+F 
Sbjct: 803 MTENRGGENRSRGGGKKLRLSLVAGERRRLVSVKSN--CGKRRWRRCVGGSQFKARMEFF 862

Query: 61  GIKMVTKSQVGLEIFTKDALKFADGVEQLWTRKKAWKG 91
             ++VTK QV  EI  KD LKFA+ VEQL  +KKA KG
Sbjct: 863 ETRIVTKPQVRPEISRKDVLKFAEEVEQLRRKKKAQKG 898

[Close]
BLAST of PI0023600 vs. NCBI nr
Match: TYK01683.1 (putative acyl-activating enzyme 19 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 7.8e-04
Identity = 38/98 (38.78%), Postives = 57/98 (58.16%), Query Frame = 0 

Query: 1   MVMNNRAEERNK--------AVTSGQRKKKVRFRENQLREEEMETKCVGGSRPEAQMKFV 60
           M  N   E R++        ++ +G+R++ V  + N    +    +CVGGS+ +A+M+F 
Sbjct: 803 MTENRGGENRSRGGGKKLRLSLVAGERRRLVSVKSN--CGKRRWRRCVGGSQFKARMEFF 862

Query: 61  GIKMVTKSQVGLEIFTKDALKFADGVEQLWTRKKAWKG 91
             ++VTK QV  EI  KD LKFA+ VEQL  +KKA KG
Sbjct: 863 ETRIVTKPQVRPEISRKDVLKFAEEVEQLRRKKKAQKG 898

The following BLAST results are available for this feature:
BLAST of PI0023600 vs.
Match NameE-valueIdentityDescription
BLAST of PI0023600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BPQ33.8e-0438.78Putative acyl-activating enzyme 19 isoform X3 OS=Cucumis melo var. makuwa OX=119... [more]
BLAST of PI0023600 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01683.17.8e-0438.78putative acyl-activating enzyme 19 isoform X3 [Cucumis melo var. makuwa][more]
BLAST of PI0023600 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023600.1PI0023600.1mRNA