PI0023572 (gene) Melon (PI 482460) v1

Overview


Name	PI0023572
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr01: 1334163 .. 1334959 (+)
RNA-Seq Expression	PI0023572
Synteny	PI0023572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAACAAATCTTTGATTTTTGTAGGTATGGTAACTACATAGGTATGTCACTAAGAATTACTGATCCCGACTTAAGGCATCAACCACAAAACCAAATTCACACTCGACGTAACTCGCCAACATTTGTCAAACAAATCGACCTTAATTTCAAAGTTCAACTCAAATGCCAACGCTTTCAAGTATGTGAAGAAGGTAATAGACGCACAACAACTTTACTTGGTGAACACATAAGTTCACAATATCCCTTTGCAACTTTCCAACTTCCTATCTCCATCTTCAAGCATCGTGACAAGACTTTGAAGCGATTACTTTTTCGAAAGTTTAAGATGTATAGAGACATCATCAACATCGAACTGGTGGTTAGCGAAATAATAAAACATTGGGTAAAAAAGTTGAAGAAGAAGAAGAAGAGAATAATTCTAGGATGTTTAAAAAGATTCATCATCTTGAAATTACGATAGAGTTGTTGGTTTTTGACATGGTTCGTGCAATAGATGAACCACAAGTAATGATAGACGATCAACCACAAGTAATGATGGTTCCAACAAGCGAGGGTGCTATGAAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAAAAATGAAATTAGGTGATGGGGAAAGCATTAATTGTGTTATTTGTTTGGAGGAAATTAATAAAGAGGAGAAAGGAAGTGAGAGAGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGGAGAATGCATAAGCAAGTGGTTGAAGACAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

mRNA sequence

ATGGCTGAACAAATCTTTGATTTTTGTAGGTATGGTAACTACATAGGTATGTCACTAAGAATTACTGATCCCGACTTAAGGCATCAACCACAAAACCAAATTCACACTCGACGTAACTCGCCAACATTTGTCAAACAAATCGACCTTAATTTCAAAGTTCAACTCAAATGCCAACGCTTTCAAGTATGTGAAGAAGGTAATAGACGCACAACAACTTTACTTGGTGAACACATAAGTTCACAATATCCCTTTGCAACTTTCCAACTTCCTATCTCCATCTTCAAGCATCAGAATAATTCTAGGATGTTTAAAAAGATTCATCATCTTGAAATTACGATAGAGTTGTTGGTTTTTGACATGGTTCGTGCAATAGATGAACCACAAGTAATGATAGACGATCAACCACAAGTAATGATGGTTCCAACAAGCGAGGGTGCTATGAAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAAAAATGAAATTAGGTGATGGGGAAAGCATTAATTGTGTTATTTGTTTGGAGGAAATTAATAAAGAGGAGAAAGGAAGTGAGAGAGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGGAGAATGCATAAGCAAGTGGTTGAAGACAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

Coding sequence (CDS)

ATGGCTGAACAAATCTTTGATTTTTGTAGGTATGGTAACTACATAGGTATGTCACTAAGAATTACTGATCCCGACTTAAGGCATCAACCACAAAACCAAATTCACACTCGACGTAACTCGCCAACATTTGTCAAACAAATCGACCTTAATTTCAAAGTTCAACTCAAATGCCAACGCTTTCAAGTATGTGAAGAAGGTAATAGACGCACAACAACTTTACTTGGTGAACACATAAGTTCACAATATCCCTTTGCAACTTTCCAACTTCCTATCTCCATCTTCAAGCATCAGAATAATTCTAGGATGTTTAAAAAGATTCATCATCTTGAAATTACGATAGAGTTGTTGGTTTTTGACATGGTTCGTGCAATAGATGAACCACAAGTAATGATAGACGATCAACCACAAGTAATGATGGTTCCAACAAGCGAGGGTGCTATGAAGAGTATGTTAAAGAGAGTGGAAAACGAAGAAAAAATGAAATTAGGTGATGGGGAAAGCATTAATTGTGTTATTTGTTTGGAGGAAATTAATAAAGAGGAGAAAGGAAGTGAGAGAGTGGTGTTACAAATGCCATGTTTGCATATGTTTCATGGAGAATGCATAAGCAAGTGGTTGAAGACAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTATAAACAATTGA

Protein sequence

MAEQIFDFCRYGNYIGMSLRITDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQRFQVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFKHQNNSRMFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQPQVMMVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHMFHGECISKWLKTSHYCPTCRFSMPINN

Homology

[Close]

BLAST of PI0023572 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 30/59 (50.85%), Postives = 34/59 (57.63%), Query Frame = 0


Query: 164 DGESINCVICLEEINKEEKGSERVVLQMPCLHMFHGECISKWLKTSHYCPTCRFSMPIN 223
           DG    CVICLEE   EE      V +MPC H FHG CI KWL     CP CR+ MP++
Sbjct: 107 DGCEGECVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of PI0023572 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.4e-08
Identity = 31/80 (38.75%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 141 PTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHMFHGE 200
           P S+ A++S L RVE  +      G   NC +C E    E +  E     MPC H+FH +
Sbjct: 174 PASKSAIES-LPRVEISD---CHIGSEANCAVCTEIFETETEARE-----MPCKHLFHDD 233

Query: 201 CISKWLKTSHYCPTCRFSMP 221
           CI  WL   + CP CRF +P
Sbjct: 234 CIVPWLSIRNSCPVCRFELP 244

[Close]

BLAST of PI0023572 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.3e-08
Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 141 PTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHMFHGE 200
           P S+ A++S L RVE  +     +    NC +C E      +G E     MPC H+FHG+
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAEA---NCAVCTEVFEAGIEGRE-----MPCKHIFHGD 249

Query: 201 CISKWLKTSHYCPTCRFSMP 221
           CI  WL   + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

[Close]

BLAST of PI0023572 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 27/83 (32.53%), Postives = 44/83 (53.01%), Query Frame = 0


Query: 141 PTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHMFHGE 200
           P ++  ++S+ + V    K +L       C +CL E  +EE      V++MPC H+FH  
Sbjct: 65  PAAKAVVESLPRTVIRSSKAEL------KCPVCLLEFEEEE-----TVIEMPCHHLFHSN 124

Query: 201 CISKWLKTSHYCPTCRFSMPINN 224
           CI  WL  ++ CP CR  +P ++
Sbjct: 125 CILPWLSKTNSCPLCRHELPTDD 136

[Close]

BLAST of PI0023572 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 30/100 (30.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 124 IDEPQVMIDDQPQVMMVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKG 183
           ID     + D  Q +  P ++  ++S+   + + E+   G    + C +CL E  ++E  
Sbjct: 37  IDSGSFDLSDWDQRLPPPAAKAVVQSLPVVIISPEQADKG----VKCPVCLLEFEEQES- 96

Query: 184 SERVVLQMPCLHMFHGECISKWLKTSHYCPTCRFSMPINN 224
               V +MPC H+FH  CI  WL  ++ CP CR  +P +N
Sbjct: 97  ----VREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTDN 127

[Close]

BLAST of PI0023572 vs. ExPASy TrEMBL
Match: A0A0A0K7L0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.8e-80
Identity = 162/267 (60.67%), Postives = 186/267 (69.66%), Query Frame = 0


Query: 1   MAEQIFDFCRY--GNYIGMSLRITDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQ 60
           MAEQIF  CRY  G+YIGMSLRITDPDLRHQPQ+QI T  NSPT VKQIDLNFKV++KCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  RFQVCEEGNRRT--TTLLGEHISSQYPFATFQLPISIFKH-------------------- 120
            +    EG   T  T LL EHISS +P  T QLP+SIFKH                    
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 --------------------QNNSRMFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQPQ 180
                                + S++F++I+ LEITIELLV+ M+ AID+P  ++ DQPQ
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 VMMVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHM 224
           VMMVPTSE AM+SMLK+VENEE +K GD +SINCVICLEEI+KE+KGSE VVLQMPCLHM
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240

[Close]

BLAST of PI0023572 vs. ExPASy TrEMBL
Match: A0A0A0K2A5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.7e-76
Identity = 158/270 (58.52%), Postives = 183/270 (67.78%), Query Frame = 0


Query: 1   MAEQIFDFCRYGNYIGMSLRI-TDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQR 60
           MAE+IFD CR G+Y+GM LRI  DP  R +PQ QI TRRNSPTF KQIDLNF+VQLKCQ 
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FQVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFKH----------------------- 120
           FQ+ EE    TTTL+ EHI SQ+PFATF+LPISI +H                       
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 -----------------------QNNSRMFKKIHHLEITIELLVFDMVRAID-EPQVMID 180
                                    +SR+FKKI+ LEIT+ELL+F +VR +D +PQV+  
Sbjct: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVL-- 180

Query: 181 DQPQVMMVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMP 223
                MMVPTS+ AM+SMLKRVENEE MKLGD + I+CVICLEEI KEEKGSE VVLQMP
Sbjct: 181 -----MMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGVVLQMP 240

[Close]

BLAST of PI0023572 vs. ExPASy TrEMBL
Match: A0A5D3C4K6 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001670 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 160/269 (59.48%), Postives = 187/269 (69.52%), Query Frame = 0


Query: 1   MAEQIFDFCRY--GNYIGMSLRITDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQ 60
           MAE+IF+ CRY  G+Y+GMSLRITDP+ RHQP NQI  + +SPT V+QI L FKVQLKCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  RFQVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFKH---------------------- 120
            FQV E GN  +TTL+ EHI SQ+ FATFQLPISIFKH                      
Sbjct: 61  HFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINI 120

Query: 121 ---------------------QNNSR-MFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQ 180
                                +NNS  +FKKI+ LEI I LLV  M+RA+ +P++ + DQ
Sbjct: 121 ELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMIDQ 180

Query: 181 PQVMMVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCL 224
           P  +MVPTS+ A++SMLKRVENEE MK GD ESINCV+CLEEI+KEEKGSE  VLQMPCL
Sbjct: 181 P--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCL 240

[Close]

BLAST of PI0023572 vs. ExPASy TrEMBL
Match: E5GCQ3 (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 160/269 (59.48%), Postives = 187/269 (69.52%), Query Frame = 0


Query: 1   MAEQIFDFCRY--GNYIGMSLRITDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQ 60
           MAE+IF+ CRY  G+Y+GMSLRITDP+ RHQP NQI  + +SPT V+QI L FKVQLKCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  RFQVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFKH---------------------- 120
            FQV E GN  +TTL+ EHI SQ+ FATFQLPISIFKH                      
Sbjct: 61  HFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINI 120

Query: 121 ---------------------QNNSR-MFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQ 180
                                +NNS  +FKKI+ LEI I LLV  M+RA+ +P++ + DQ
Sbjct: 121 ELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMIDQ 180

Query: 181 PQVMMVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCL 224
           P  +MVPTS+ A++SMLKRVENEE MK GD ESINCV+CLEEI+KEEKGSE  VLQMPCL
Sbjct: 181 P--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCL 240

[Close]

BLAST of PI0023572 vs. ExPASy TrEMBL
Match: A0A0A0K2A1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.2e-72
Identity = 154/264 (58.33%), Postives = 174/264 (65.91%), Query Frame = 0


Query: 1   MAEQIFDFCRYGNYIGMSLRITDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQRF 60
           MAEQ FD C  G Y+GMSLRITDP         I TR NSPT VKQIDLNFKV++KCQ F
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQHF 60

Query: 61  QVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFKH------------------------ 120
           Q  EE     TT L EHI +  PF   QLP+SIFKH                        
Sbjct: 61  QAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIEL 120

Query: 121 -----------------QNNSRMFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQPQVMM 180
                            +NNS +F++I+ LEITIE+LV  M+ A+D+PQ  I DQPQV M
Sbjct: 121 VTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQPQVRM 180

Query: 181 VPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHMFHG 224
           VPTS+ AMKSMLKRVENEE MK+GD +SI+CVICLE+I+KEEKGSE VVLQMPCLHMFH 
Sbjct: 181 VPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHE 240

[Close]

BLAST of PI0023572 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putative zinc finger protein [Cucumis melo var. makuwa] >TYK06863.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 289.3 bits (739), Expect = 2.9e-74
Identity = 160/269 (59.48%), Postives = 187/269 (69.52%), Query Frame = 0


Query: 1   MAEQIFDFCRY--GNYIGMSLRITDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQ 60
           MAE+IF+ CRY  G+Y+GMSLRITDP+ RHQP NQI  + +SPT V+QI L FKVQLKCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  RFQVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFKH---------------------- 120
            FQV E GN  +TTL+ EHI SQ+ FATFQLPISIFKH                      
Sbjct: 61  HFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINI 120

Query: 121 ---------------------QNNSR-MFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQ 180
                                +NNS  +FKKI+ LEI I LLV  M+RA+ +P++ + DQ
Sbjct: 121 ELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMIDQ 180

Query: 181 PQVMMVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCL 224
           P  +MVPTS+ A++SMLKRVENEE MK GD ESINCV+CLEEI+KEEKGSE  VLQMPCL
Sbjct: 181 P--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCL 240

[Close]

BLAST of PI0023572 vs. NCBI nr
Match: KAE8645828.1 (hypothetical protein Csa_017274 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 2.9e-74
Identity = 154/258 (59.69%), Postives = 178/258 (68.99%), Query Frame = 0


Query: 1   MAEQIFDFCRY--GNYIGMSLRITDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQ 60
           MAEQIF  CRY  G+YIGMSLRITDPDLRHQPQ+QI T  NSPT VKQIDLNFKV++KCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  RFQVCEEGNRRT--TTLLGEHISSQYPFATFQLPISIFKH-------------------- 120
            +    EG   T  T LL EHISS +P  T QLP+SIFKH                    
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 --------------------QNNSRMFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQPQ 180
                                + S++F++I+ LEITIELLV+ M+ AID+P  ++ DQPQ
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 VMMVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHM 215
           VMMVPTSE AM+SMLK+VENEE +K GD +SINCVICLEEI+KE+KGSE VVLQMPCLHM
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240

[Close]

BLAST of PI0023572 vs. NCBI nr
Match: KGN43799.1 (hypothetical protein Csa_017222 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 4.3e-70
Identity = 150/265 (56.60%), Postives = 179/265 (67.55%), Query Frame = 0


Query: 1   MAEQIFDFC-RYGNYIGMSLRITDPDLRHQPQNQIHTRRNSPTFVKQIDLNFKVQLKCQR 60
           MAE  FD C   G ++GMSLRITDPDL  QPQ+Q  T  NSPTFVKQI+L  KV++KCQ 
Sbjct: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60

Query: 61  FQVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFKH----------------------- 120
           FQ  EEG+   +TL+ EHI S +PF TFQLP+S+F+H                       
Sbjct: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120

Query: 121 -----------------QNNSR-MFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQPQVM 180
                            +NNS  + ++I+ LEITIELL+  M+ AID+P+  I DQPQV 
Sbjct: 121 LVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQPQVT 180

Query: 181 MVPTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHMFH 224
           MVP SE AM+SMLKRVE EE +K+G+ +SINCVICLEEI+K+ KGSE VVLQMPCLHMFH
Sbjct: 181 MVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFH 240

[Close]

BLAST of PI0023572 vs. NCBI nr
Match: ADN34253.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >TYK06864.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 268.9 bits (686), Expect = 4.0e-68
Identity = 157/267 (58.80%), Postives = 175/267 (65.54%), Query Frame = 0


Query: 1   MAEQIFDFC-RYGNYIGMSLRITDPDLRH-QPQNQIHTRRNSPTFVKQIDLNFKVQLKCQ 60
           MAEQ  D C   G Y+GMSLRITDPDLRH QPQ+QI T+ NSP  VKQIDLNFK+Q+KCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  RFQVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFK----------------------- 120
            F   EEG+   TTLL EHI SQ  F   QLPISIFK                       
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 ------------------HQNNSRMFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQPQV 180
                              +NNSR+F +I+ LEI IELLV  M+ AI      ID   +V
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI------IDQPQEV 180

Query: 181 MMVPTSEGAMKSMLKRVE-NEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHM 224
           MMVPTS+ AM+SMLKRVE NEE MKLGD +SI+CVICLE+I KEEK S RVVLQMPCLHM
Sbjct: 181 MMVPTSDNAMESMLKRVENNEELMKLGD-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHM 240

[Close]

BLAST of PI0023572 vs. NCBI nr
Match: KAA0031413.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 4.5e-67
Identity = 155/267 (58.05%), Postives = 175/267 (65.54%), Query Frame = 0


Query: 1   MAEQIFDFC-RYGNYIGMSLRITDPDLRH-QPQNQIHTRRNSPTFVKQIDLNFKVQLKCQ 60
           MAEQ  D C   G Y+GMSLRITDPDLRH QPQ+QI T+ NSP  VKQIDLNFK+Q+KCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  RFQVCEEGNRRTTTLLGEHISSQYPFATFQLPISIFK----------------------- 120
            F   EEG+   TTLL EHI SQ  F   QLPISIFK                       
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 ------------------HQNNSRMFKKIHHLEITIELLVFDMVRAIDEPQVMIDDQPQV 180
                              +N+SR+F +I+ LEI IELLV  M+ AI      ID   +V
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENSSRVFAEIYPLEIRIELLVCRMIPAI------IDQPQEV 180

Query: 181 MMVPTSEGAMKSMLKRVE-NEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHM 224
           MMVPTS+ AM+SMLKRVE N+E MKLGD +SI+CVICLE+I KEEK S RVVLQMPCLHM
Sbjct: 181 MMVPTSDNAMESMLKRVENNKELMKLGD-DSIDCVICLEKIGKEEKRSGRVVLQMPCLHM 240

[Close]

BLAST of PI0023572 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.3e-11
Identity = 30/59 (50.85%), Postives = 34/59 (57.63%), Query Frame = 0


Query: 164 DGESINCVICLEEINKEEKGSERVVLQMPCLHMFHGECISKWLKTSHYCPTCRFSMPIN 223
           DG    CVICLEE   EE      V +MPC H FHG CI KWL     CP CR+ MP++
Sbjct: 107 DGCEGECVICLEEWKSEE-----TVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of PI0023572 vs. TAIR 10
Match: AT3G13228.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-10
Identity = 34/112 (30.36%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 109 LEITIELLVFDMVRAIDEPQVMIDDQPQVMMVPTSEGAMKSMLKRVENEEKMKLGDGESI 168
           L++++ L   D     +  QV  D+     + P S+  +KS+ +++ ++       GE  
Sbjct: 219 LQVSLYLFPHDETDIEEAVQVSFDETTNFCLGPASKLVVKSLTRKIYDKINY---TGE-- 278

Query: 169 NCVICLEEINKEEKGSERVVLQMPCLHMFHGECISKWLKTSHYCPTCRFSMP 221
            C ICLEE N     +  +++ +PC H F  EC  KW +T+H+CP CR+ +P
Sbjct: 279 RCTICLEEFN-----AGGILVALPCGHDFDDECAVKWFETNHFCPLCRYELP 320

[Close]

BLAST of PI0023572 vs. TAIR 10
Match: AT5G37230.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 138 MMVPTSEGAMKSMLKRVENEEKMK---LGDGESINCVICLEEINKEEKGSERVVLQMPCL 197
           +M+P+     + M +R+  E+ M+   LGD E   C IC+E+ +  E   + ++L   C 
Sbjct: 118 VMLPSIVVRSRDMFQRLLEEQTMELTNLGDEEETTCSICMEDFS--ESHDDNIILLPDCF 177

Query: 198 HMFHGECISKWLKTSHYCPTCR 217
           H+FH  CI KWLK    CP CR
Sbjct: 178 HLFHQSCIFKWLKRQRSCPLCR 197

[Close]

BLAST of PI0023572 vs. TAIR 10
Match: AT1G74620.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 166 ESINCVICLEEINKEEKGSERVVLQMPCLHMFHGECISKWLKTSHYCPTCRFSMP 221
           E   C IC+E+  +       +V ++PC H FHG+CI+KWL+ +H CP CR S+P
Sbjct: 179 EENGCAICMEDYIE----GSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIP 229

[Close]

BLAST of PI0023572 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-09
Identity = 31/80 (38.75%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 141 PTSEGAMKSMLKRVENEEKMKLGDGESINCVICLEEINKEEKGSERVVLQMPCLHMFHGE 200
           P S+ A++S L RVE  +      G   NC +C E    E +  E     MPC H+FH +
Sbjct: 174 PASKSAIES-LPRVEISD---CHIGSEANCAVCTEIFETETEARE-----MPCKHLFHDD 233

Query: 201 CISKWLKTSHYCPTCRFSMP 221
           CI  WL   + CP CRF +P
Sbjct: 234 CIVPWLSIRNSCPVCRFELP 244

The following BLAST results are available for this feature:

BLAST of PI0023572 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	1.2e-09	50.85	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q940T5	6.4e-08	38.75	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9SNB6	8.3e-08	38.75	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q6AXU4	1.1e-07	32.53	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]
Q7ZW78	1.9e-07	30.00	E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2	[more]

BLAST of PI0023572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7L0	3.8e-80	60.67	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 P...	[more]
A0A0A0K2A5	5.7e-76	58.52	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 P...	[more]
A0A5D3C4K6	1.4e-74	59.48	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCQ3	1.4e-74	59.48	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0K2A1	2.2e-72	58.33	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 P...	[more]

BLAST of PI0023572 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34252.1	2.9e-74	59.48	hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putati...	[more]
KAE8645828.1	2.9e-74	59.69	hypothetical protein Csa_017274 [Cucumis sativus]	[more]
KGN43799.1	4.3e-70	56.60	hypothetical protein Csa_017222 [Cucumis sativus]	[more]
ADN34253.1	4.0e-68	58.80	hypothetical zinc finger protein [Cucumis melo subsp. melo] >TYK06864.1 putative...	[more]
KAA0031413.1	4.5e-67	58.05	putative zinc finger protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0023572 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26800.1	8.3e-11	50.85	RING/U-box superfamily protein	[more]
AT3G13228.1	2.4e-10	30.36	RING/U-box superfamily protein	[more]
AT5G37230.1	4.1e-10	36.59	RING/U-box superfamily protein	[more]
AT1G74620.1	2.0e-09	43.64	RING/U-box superfamily protein	[more]
AT5G59550.1	4.5e-09	38.75	zinc finger (C3HC4-type RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 170..215 e-value: 9.3E-8 score: 41.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 169..216 e-value: 1.0E-12 score: 48.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 170..216 score: 12.769585
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 169..216 e-value: 0.0018 score: 13.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 131..222 e-value: 1.1E-18 score: 68.6
None	No IPR available	PANTHER	PTHR15710:SF77	OS07G0631200 PROTEIN	coord: 68..218
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 68..218
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 159..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023572.1	PI0023572.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding