PI0023555 (gene) Melon (PI 482460) v1

Overview
NamePI0023555
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPGG domain-containing protein
Locationchr03: 5933075 .. 5933840 (-)
RNA-Seq ExpressionPI0023555
SyntenyPI0023555
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCAAAGTTTTTATTAGCAATATAATCATAATGTCAAAAACAGGGGCAAAGAATGAAGAGGCAACAGTAGTATCTATAGATACTGAAAATGAAAATAGAAAGGATAGAGAAGAGAAGAACAATGGTTGGATGGGACCAGGAGATGTGGATTTTGTAATGGTAAGCCCTTCAATTTCTCTGCTCTTTTTGTTTCTCCCTCTGCCCTCTATCGGTTATTAGTGGTTGGATGGGACTTCATTACTGTTTCATTTTCTTTTTCTCATCTTATTATTTGTCAATTTCACCACAGGTTGTAGTAACATTCATCGCAGCCGTGGCATTCCAAGTAGGAACGAATCCACCGGGCAGTGTATGGCAAGAGGACAAGAATGGGTTTACTGCAGGTAAATCAATAATGGCTTCAAAATCACCTTCTGAATACAAAAAATTCATGGCGGGAGTGACATTATGTCTTGCATTTTCATTGATCCAGTTAAGTGTGATGTTATTCAAATGGTATCTCAAAAGTTATTCAGTTAGGAGAATGATTATGTACATACTGATGCTATGTACAATAGCGCCAATGATTGTTGCGTATTGGGCCTCTGTTAAAGCTTTGACACCTGGTGAAAAATTAATGTCTGAGATCACTGCTACCATATGGTCTATTTTGGGAGTCTATCTTATTGGCCTCCCATTTGTTCTACTTTACTACCTAGTCAAGAAATTTTTGTGAGTTATGTCATTTTCCTAATATTTTATCTTGTATTAATTTCCTTCATTCAT

mRNA sequence

CTTCAAAGTTTTTATTAGCAATATAATCATAATGTCAAAAACAGGGGCAAAGAATGAAGAGGCAACAGTAGTATCTATAGATACTGAAAATGAAAATAGAAAGGATAGAGAAGAGAAGAACAATGGTTGGATGGGACCAGGAGATGTGGATTTTGTAATGGTTGTAGTAACATTCATCGCAGCCGTGGCATTCCAAGTAGGAACGAATCCACCGGGCAGTGTATGGCAAGAGGACAAGAATGGGTTTACTGCAGGTAAATCAATAATGGCTTCAAAATCACCTTCTGAATACAAAAAATTCATGGCGGGAGTGACATTATGTCTTGCATTTTCATTGATCCAGTTAAGTGTGATGTTATTCAAATGGTATCTCAAAAGTTATTCAGTTAGGAGAATGATTATGTACATACTGATGCTATGTACAATAGCGCCAATGATTGTTGCGTATTGGGCCTCTGTTAAAGCTTTGACACCTGGTGAAAAATTAATGTCTGAGATCACTGCTACCATATGGTCTATTTTGGGAGTCTATCTTATTGGCCTCCCATTTGTTCTACTTTACTACCTAGTCAAGAAATTTTTGTGAGTTATGTCATTTTCCTAATATTTTATCTTGTATTAATTTCCTTCATTCAT

Coding sequence (CDS)

ATGTCAAAAACAGGGGCAAAGAATGAAGAGGCAACAGTAGTATCTATAGATACTGAAAATGAAAATAGAAAGGATAGAGAAGAGAAGAACAATGGTTGGATGGGACCAGGAGATGTGGATTTTGTAATGGTTGTAGTAACATTCATCGCAGCCGTGGCATTCCAAGTAGGAACGAATCCACCGGGCAGTGTATGGCAAGAGGACAAGAATGGGTTTACTGCAGGTAAATCAATAATGGCTTCAAAATCACCTTCTGAATACAAAAAATTCATGGCGGGAGTGACATTATGTCTTGCATTTTCATTGATCCAGTTAAGTGTGATGTTATTCAAATGGTATCTCAAAAGTTATTCAGTTAGGAGAATGATTATGTACATACTGATGCTATGTACAATAGCGCCAATGATTGTTGCGTATTGGGCCTCTGTTAAAGCTTTGACACCTGGTGAAAAATTAATGTCTGAGATCACTGCTACCATATGGTCTATTTTGGGAGTCTATCTTATTGGCCTCCCATTTGTTCTACTTTACTACCTAGTCAAGAAATTTTTGTGA

Protein sequence

MSKTGAKNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNPPGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVMLFKWYLKSYSVRRMIMYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVLLYYLVKKFL
Homology
BLAST of PI0023555 vs. ExPASy TrEMBL
Match: A0A0A0KIL3 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363520 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.1e-84
Identity = 167/184 (90.76%), Postives = 174/184 (94.57%), Query Frame = 0

Query: 1   MSKTGAKNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNP 60
           MSK GAKNEEATVVSIDT +EN+KDREEKN+GWM PGDVDFVMVVVTFIAAVAFQVG NP
Sbjct: 1   MSKAGAKNEEATVVSIDTASENKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGINP 60

Query: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVMLFKWYLKSYSVR 120
           PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCL FSLIQL VMLF+WYLKSYSVR
Sbjct: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVMLFRWYLKSYSVR 120

Query: 121 RMIMYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVLLYYLV 180
           RMIMYILMLCTIAPMIV++WASVKALTP EKLMSEITATIWSILGVYLI LP +LLYYLV
Sbjct: 121 RMIMYILMLCTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIILLYYLV 180

Query: 181 KKFL 185
           K FL
Sbjct: 181 KTFL 184

BLAST of PI0023555 vs. ExPASy TrEMBL
Match: A0A1S3BCY4 (uncharacterized protein LOC103488512 OS=Cucumis melo OX=3656 GN=LOC103488512 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.7e-82
Identity = 159/184 (86.41%), Postives = 173/184 (94.02%), Query Frame = 0

Query: 1   MSKTGAKNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNP 60
           MSK GAKNEEATVV+IDTE ENRKD EE N+GWM PGDVDFVM+VVTFIAAVAFQVGTNP
Sbjct: 1   MSKAGAKNEEATVVAIDTETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGTNP 60

Query: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVMLFKWYLKSYSVR 120
           PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCL+FSLIQLSVMLF+WYLK+YSVR
Sbjct: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLSFSLIQLSVMLFRWYLKTYSVR 120

Query: 121 RMIMYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVLLYYLV 180
           RMIMY+LM+CTIAPMI ++WASVKALTP EK+MSEITATIWS  GVYL+ LP +LLYYL+
Sbjct: 121 RMIMYLLMICTIAPMIFSFWASVKALTPDEKIMSEITATIWSSFGVYLMSLPLILLYYLL 180

Query: 181 KKFL 185
           KKFL
Sbjct: 181 KKFL 184

BLAST of PI0023555 vs. ExPASy TrEMBL
Match: A0A5A7VCJ4 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00270 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 9.6e-29
Identity = 66/74 (89.19%), Postives = 69/74 (93.24%), Query Frame = 0

Query: 1  MSKTGAKNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNP 60
          MSK GAKNEEATVV+IDTE ENRKD EE N+GWM PGDVDFVM+VVTFIAAVAFQVGTNP
Sbjct: 1  MSKAGAKNEEATVVAIDTETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGTNP 60

Query: 61 PGSVWQEDKNGFTA 75
          PGSVWQEDKNGFTA
Sbjct: 61 PGSVWQEDKNGFTA 74

BLAST of PI0023555 vs. ExPASy TrEMBL
Match: A0A1S4DVA8 (uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.4e-26
Identity = 84/183 (45.90%), Postives = 120/183 (65.57%), Query Frame = 0

Query: 7   KNEEATVVSIDTE---NENRKDREEKNNGWMGPG-DVDFVMVVVTFIAAVAFQVGTNPPG 66
           K E+ +V+SI+T+   NE  K+ ++K     G G D DF+MV  TFIAA+AFQ GTNPPG
Sbjct: 4   KVEDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPG 63

Query: 67  SVWQEDKN-GFTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVMLFKWYLKSYSVRR 126
            VWQ+D +  + AGKSIMA+KSPS +  FM+GVT+C A S +Q  V+L K   KS+SV +
Sbjct: 64  GVWQDDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKSSEKSWSVSK 123

Query: 127 MIMYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVLLYYLVK 185
             +Y  M   I+ ++VAYW+++KALTP E  MS +   + + L + ++ LP  +  Y+ K
Sbjct: 124 SFIYFTMGSGISAIVVAYWSAIKALTP-EAQMSHVIVMLKTTLVLSVVVLPISM--YIEK 183

BLAST of PI0023555 vs. ExPASy TrEMBL
Match: A0A5A7VAU9 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00280 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-23
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 0

Query: 10  EATVVSID-TENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNPPGSVWQE- 69
           E+  ++ID TE  + K++   NN W+   D DF+MVV TFIA VAFQ+GTNPPG VWQE 
Sbjct: 9   ESVAITIDTTETGHEKNKMMNNNNWIRE-DTDFLMVVTTFIATVAFQIGTNPPGGVWQED 68

Query: 70  DKNG-FTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVM-LFKWYL--KSYSVRRMI 129
           DK G + AGKSIMA+KSPS++  ++  +T C  FS +Q +V+ L KW +  K++S  R I
Sbjct: 69  DKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFI 128

Query: 130 MYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVLLY 178
           +Y  M   I+ M +AY  SV+A TP  +  +    +  ++LG + IGL  + LY
Sbjct: 129 LYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLG-FPIGLAAISLY 180

BLAST of PI0023555 vs. NCBI nr
Match: XP_004144204.1 (uncharacterized protein LOC101208403 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 4.3e-84
Identity = 167/184 (90.76%), Postives = 174/184 (94.57%), Query Frame = 0

Query: 1   MSKTGAKNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNP 60
           MSK GAKNEEATVVSIDT +EN+KDREEKN+GWM PGDVDFVMVVVTFIAAVAFQVG NP
Sbjct: 1   MSKAGAKNEEATVVSIDTASENKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGINP 60

Query: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVMLFKWYLKSYSVR 120
           PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCL FSLIQL VMLF+WYLKSYSVR
Sbjct: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVMLFRWYLKSYSVR 120

Query: 121 RMIMYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVLLYYLV 180
           RMIMYILMLCTIAPMIV++WASVKALTP EKLMSEITATIWSILGVYLI LP +LLYYLV
Sbjct: 121 RMIMYILMLCTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIILLYYLV 180

Query: 181 KKFL 185
           K FL
Sbjct: 181 KTFL 184

BLAST of PI0023555 vs. NCBI nr
Match: KAE8647228.1 (hypothetical protein Csa_018955 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 1.3e-83
Identity = 166/183 (90.71%), Postives = 174/183 (95.08%), Query Frame = 0

Query: 2   SKTGAKNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNPP 61
           SK+GAKNEEATVVSIDT +EN+KDREEKN+GWM PGDVDFVMVVVTFIAAVAFQVG NPP
Sbjct: 188 SKSGAKNEEATVVSIDTASENKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGINPP 247

Query: 62  GSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVMLFKWYLKSYSVRR 121
           GSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCL FSLIQL VMLF+WYLKSYSVRR
Sbjct: 248 GSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVMLFRWYLKSYSVRR 307

Query: 122 MIMYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVLLYYLVK 181
           MIMYILMLCTIAPMIV++WASVKALTP EKLMSEITATIWSILGVYLI LP +LLYYLVK
Sbjct: 308 MIMYILMLCTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIILLYYLVK 367

Query: 182 KFL 185
            FL
Sbjct: 368 TFL 370

BLAST of PI0023555 vs. NCBI nr
Match: XP_008445521.1 (PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo])

HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81
Identity = 159/184 (86.41%), Postives = 173/184 (94.02%), Query Frame = 0

Query: 1   MSKTGAKNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNP 60
           MSK GAKNEEATVV+IDTE ENRKD EE N+GWM PGDVDFVM+VVTFIAAVAFQVGTNP
Sbjct: 1   MSKAGAKNEEATVVAIDTETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGTNP 60

Query: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVMLFKWYLKSYSVR 120
           PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCL+FSLIQLSVMLF+WYLK+YSVR
Sbjct: 61  PGSVWQEDKNGFTAGKSIMASKSPSEYKKFMAGVTLCLSFSLIQLSVMLFRWYLKTYSVR 120

Query: 121 RMIMYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVLLYYLV 180
           RMIMY+LM+CTIAPMI ++WASVKALTP EK+MSEITATIWS  GVYL+ LP +LLYYL+
Sbjct: 121 RMIMYLLMICTIAPMIFSFWASVKALTPDEKIMSEITATIWSSFGVYLMSLPLILLYYLL 180

Query: 181 KKFL 185
           KKFL
Sbjct: 181 KKFL 184

BLAST of PI0023555 vs. NCBI nr
Match: XP_038884181.1 (uncharacterized protein LOC120075089 [Benincasa hispida])

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-58
Identity = 133/189 (70.37%), Postives = 154/189 (81.48%), Query Frame = 0

Query: 1   MSKTGA-KNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTN 60
           M+K GA K+EEAT VSIDTE E+RKDREE N GW+   DVDFVMV+VTFIA VAFQ GTN
Sbjct: 1   MAKAGAKKDEEATAVSIDTERESRKDREEANQGWI-ERDVDFVMVIVTFIATVAFQAGTN 60

Query: 61  PPGSVWQEDK--NG--FTAGKSIMASKSPSEYKKFMAGVTLCLAFSLIQLSVMLFKWYLK 120
           PPG VWQEDK  NG  + AGKSIM +KSPSEY KFM GVT+CLAFS+IQL VMLF WYLK
Sbjct: 61  PPGGVWQEDKKVNGTDYIAGKSIMGTKSPSEYIKFMVGVTVCLAFSVIQLIVMLFNWYLK 120

Query: 121 SYSVRRMIMYILMLCTIAPMIVAYWASVKALTPGEKLMSEITATIWSILGVYLIGLPFVL 180
           S+S+RR I+Y+LML TI PM+VA+W+S+ ALTP + LM+EI A  WS++GV LI LPFVL
Sbjct: 121 SWSIRRAILYMLMLLTITPMVVAFWSSLLALTPAD-LMTEIKAGFWSVIGVSLIVLPFVL 180

Query: 181 LYYLVKKFL 185
           LYYL KK L
Sbjct: 181 LYYLTKKCL 187

BLAST of PI0023555 vs. NCBI nr
Match: KAA0064717.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa] >TYK00737.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-28
Identity = 66/74 (89.19%), Postives = 69/74 (93.24%), Query Frame = 0

Query: 1  MSKTGAKNEEATVVSIDTENENRKDREEKNNGWMGPGDVDFVMVVVTFIAAVAFQVGTNP 60
          MSK GAKNEEATVV+IDTE ENRKD EE N+GWM PGDVDFVM+VVTFIAAVAFQVGTNP
Sbjct: 1  MSKAGAKNEEATVVAIDTETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGTNP 60

Query: 61 PGSVWQEDKNGFTA 75
          PGSVWQEDKNGFTA
Sbjct: 61 PGSVWQEDKNGFTA 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KIL32.1e-8490.76PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363520 PE=4 SV... [more]
A0A1S3BCY45.7e-8286.41uncharacterized protein LOC103488512 OS=Cucumis melo OX=3656 GN=LOC103488512 PE=... [more]
A0A5A7VCJ49.6e-2989.19Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S4DVA84.4e-2645.90uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=... [more]
A0A5A7VAU91.6e-2344.83Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
XP_004144204.14.3e-8490.76uncharacterized protein LOC101208403 [Cucumis sativus][more]
KAE8647228.11.3e-8390.71hypothetical protein Csa_018955 [Cucumis sativus][more]
XP_008445521.11.2e-8186.41PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo][more]
XP_038884181.11.4e-5870.37uncharacterized protein LOC120075089 [Benincasa hispida][more]
KAA0064717.12.0e-2889.19ankyrin repeat-containing protein [Cucumis melo var. makuwa] >TYK00737.1 ankyrin... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026961PGG domainPFAMPF13962PGGcoord: 41..143
e-value: 6.9E-18
score: 64.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..32

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023555.1PI0023555.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane