PI0023509 (gene) Melon (PI 482460) v1

Overview


Name	PI0023509
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transposon Ty3-G Gag-Pol polyprotein
Location	chr02: 12228368 .. 12238455 (-)
RNA-Seq Expression	PI0023509
Synteny	PI0023509

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATCAGTTTCGGTATTAGCTTTACCAGACTGGTCATTGCCCTTTGTAGTGGAAACTAATGCTTCTGGAACAGGTTTAGGGGTTGTCCTATCTCAAAATGGCCATCCGATAGCTTTCTTCAGTAAAAAACTATCTCCCCGAGCACAAACTAAATCTATTTATGAAAGGAAATTGATGGCAGTGGTCCTAGCCTTTCAAAGATGGAGATATTATTTTCTGGGACGTCGTTTCACAGTGATATCAGATCAGAAGTGGTCGAACTGTAGGTTGTACCCAAGGGAGCAAACCGAACTTTCAAATTGGTATTAGGTTTAAAGTATAAAAGAAATAGAGCTTCAAGACACGAAAAGAGTTAGTAGTAGGGGGGTTTGTTGTATGCGAGAAAAGAAAAGGAAAATAAAAGACAGTAAAGAAATGATGGAATGAGATAGAGTAGGCGGAATAGAGATCTATAGAATCTTTTTGTCTTCCTTAGAAAATGAAGTATGCGATAAGGACTAATAACAACTAAGTACACACTACTTGTCACAGAAACAAGAGTAATTAGAAACACACTTCTTTAAAGAATATGCGAGAAGGGGGCTATGCGATAAGGTATGTTTCAATCTATAACAAAGAATTGTCTCAGCGATCTATCTTTCTTGCAAATTGAATCATGCGATTTGAACAGAAAAGAATTAACCTAGATGCATTAATGTCTCAGCGATCATAATACATTTTTGGTTGAAACTTTAAACAGATAGGCGAGGAAATTCAATCAGAATGTAAACTTATCTCAGCGACTAAGTTTGACTTTAATCAAAATGCATAGAACATTCAAGATTCACTAAGCAAGTCAGCCTATACTTAGTGAAATTGAAGTGTATCACAATATTAGCATGCGAGAAGAGCAAAGTAGGCTTATTACTTATCTACCCGGTAATCAAGCAAGCAAAGCAATCACAATTTAATTTTTGAGCTCAGCGCTCTATGCGATATGATGAATTATAGTGCATGCAAGTTTAGGGCCTAGAAACCTAAAATTACCATGCGAATTCGGGATAATTGTGAAAGGAGAATACACAGTCGAAATGAAAGAAGGCGAGGAAGATACCTTTTGTTTCTCAAAGTAGGCGAGATAGAATTATTGACCTTATCAAAAAGTTAACTCCATTGAAATTCAGTTGACAAATTGTAAAACTCTTAACATGCCTCAGCGGTCTAAACCAAAATTTTGCATAAAGGAATTTCTATGGAGAATTTGGCAGAGTAAGGCTAAGGAAATTTTATATGCAAAGGAGTATGAGAAATGAAAATTCTATAGACTTTGTATTATGAATTTGATATGAGATTCAAAGTACTTTGGAATGAAGTACATGGGGGTATATATAGGTTTCTATAGGAAGGCTAATTTGCAAAATAACCGCTATTTGACGGTTATTTTGTTACAATGGGCTTGGGCCTTGGGCTTGTGGGCTTGACGGTTATGTCAGATCGCATTCGAGCTGAATGGTGAGCTTGGCGAGCTGATGATATGCGGTGAAGCTTGCGAGCTTGAGTCAGCTGAATGAAGTGTGCGAGCTGGTGAATGAGTGTGTATGTATGTGGCAAAGTGAAGAGTGTACTTCTGCAGATGAAGTATTTCGCGAGGCTCAAGTCAGAAGGCAATGCCTTGCGGTGAAGGCAGGTTGCGTTGAGCCATGCGATCTTGAATTGGCTTTGTCGCGAAGAGGATTTGAATGCCTTAGGAAGATTACTGTTTTGCCCTTGACTTGTGTTTAGTCTATTTTGTCCGCAAGGAGCTTGTTTTAGCTCACTTTTGTGCATTAGGGCTTGTATAGGGGCTTTGTATCATATCCTATGTAAAAGTACAACATTGATAAGTAATAAAGCTTATTATTGAGAATTAGGATAGATATTTTTATACAAAATAGTTCTATCAAAACCCCTCACTTAAGACTTGATCGTCCCGATTAAGGTAGAAATTAAAGATATGCTAACATTCATTCATTCACCATGCAAGGTATTCTTGCATAATTTTGCAAAAATTAAAGTTCAAGCATTCATGCAAACTTTTGATGTTTTCAAATAGATATGCAAAGTAAGATATTCATGCCTTAACAGTCGTAAGATATTCATGCCTTAACAGTCGTACTTAGTAATCTTTGAATTTTGTTTTAAGTGGTCAAAAGAAGCAAGTGATTGATTGAGGGTTTGATTTTTAAGAAGATTCATTCAATGGTGATCATGTTTAGAGAAAACGGCCTAATTTTGATACTCCGACTCACTAGACATGCTTCGAAAGAATTAAAAAATGCCCTAGACTTGCTTTCTCTCTACTCTGAAACGGGAAGGATCCCTCTTATGCTTAGCCCTCGATCAATGCATTGAAGCTAAAATAGAAAATTTCAGGGTAGAGTTGTGTCTTATTTTACTAAAGCAAAGGATAGGCTTTTTCCGTAGGGATTCATACCACACTAACATCGGATAATCCTAACTGATCACGAAAAGAATCCTATCGTTCGACTTAACCGTACTAGAATTTTCTCTCTCTCTTGTTTTTTTTTTTTTTTGTGAGAGAATATATGGACTTTGCCATTTGCTAAAAGTATGCTTTTGCTACTTTTGATTTGGGATTCTATTTTTGGGTAACTAGCATTTGCTTAGCCCCGGTTTGGCTGACTCTTAAGCTTGACTTATTTTCTAATAGTTTCTATGTTTGACCGTTCTTTCGAGGTGACAACAAGCGAATTTAAGCATCCTACTTTTTTCTAAAGGATTCTAGGTTCGTTATGGCTAGAAAAGGGGTTTTTTCTAATTCATGGTCATTGGTGAAAAGTTTAAAAATCAAGCTTAATTTTTTTTTACATGGTTCTTTATTCGATTTAAAAGTCAAGATAAAGATTACTTAGAAGAGTGTATCATAGGCAATCATTATATAAAACTTTGCTAAGATTATAACATCCATGCATTTTTCTTTTGAACATGCATTCAATCATTCAAGCAAGCATTCATGATTTCAATCATGCAATCATCCATGGGTAAGGCAAAAATTTTATACATATTGTTTTTCTCTCTTTTTTGGAGCATGCTTTTTTGTAAACTTAGTTGTATATACTTTTGATGCTCAAGAGAAATTTAGACATTTGTCATTATAAAAAAAAAATTGATATGCATTTTTGGGCTTTCTACTTAATAGCATGCAAGTGCAATGATATGCAAGACATTGAAGCAAAATTTTAAGGCGAAGGTTACCCAACACCCCTCACTTAAAAGATGACTTTGTCCTCAAAGCATATTAATTGCTAGCTTAAAAGATAAGGGGAACAGAAAAACTCCCCTTGCTTTTAAGAATTTGAGATCCTTTAAGCAAAGTGGATGCTTCCTTTTTGGTTATTTGATTTGATTACCCTCCATGTGGAATTTGAGTAAAATTTGAGTGGAATTTCCTGTAATTGAGAAATGGAAAGTCTATTAGATTTATTTAATGTTAAAATTTAAAGACTGAATTTAAAGAAATTAAAGACAGAAAGCGAATAAAATTTTTTATGCCTGGCTACCTCCAGGAAGCGCAAATTTTTAAGGTCGTATGCTCGACCGTGCTTTCGGGCTTATGTGTAGAAGGGGAGAGTGAGGACTTCTATTGAGTTTTCTTGTGCGGTTTCTCCTTCGTAGAAGATATTAAGTCTATGCCCATTGACTTTGAAAATTTTTCCTGTTTGAAGACTTTTAATGAATACTACACCGAAGGTAGAAATGTTAGTAATAACAAAAGGTCCTATCCATTTAGATTTCAATTTTCCAGGCATTAAATTTATAGAAGAATTATATAGAAGAACTTTTTAACCTATTAAGAATTGTTTTCTAAGGATTTTCTTATCATGCAAAAGTTTGGTCTTTTCTTTGTAAATCCTGGAATTTTCATAAGCTTCTAATCTTAGTTCTTCTAGTTCTAGCATATCAAGGAATCTTTTATTACTGGCCTCTAGGAGAGAATAATTGCATTGCCTAACTGTCCAATAAGCTTTATGTTCTATTTCTACAGGTAAATGGCAAGGCTTACCAAACACAAGTTTGAATGGAGAGGTACCAATTGGAGTTTTGTAGGCCGTTCGGTATGCTCACAGTGCATCGTTCAATCGTAAGCTCCAATCTTTTCTACTTGTGTTGACTGTTTTCTCCAAGATATTCTTGATTTCTTTGTTTGAGGTTTCGGCTTGACCATTGGCTTGGGGATGATATGGAGTGGAAATAGGGTGATGAATTCCGTACTTTCGCATTAGCGCTTCAATGGTTCTATTGCAGAAGTGTGTTCCTTGATCGCTTATGATTGCACGAGGGATGCCAAATCTAGAAAAAATATTAGAAATGAGAAATCCTGAAACAGCGGTCATTAGTCCTAGTGGGGATTGCTTCCACCCACTTCGATACATAATCTACAGCTAGCAAAATGTAAAGATAGCCATGTGAAGAAGGAAAAGGACCCCTGAAATCCATACCCCATACATCAAATATTTCGCATGTTAAAATAGGGTTAAGGGGCATTTCGTTTCTCTTAGATAATGATCCTGTCTTTTGACAATTTTCACATGCTTTACAGAATGCATAAGAATCAGCAAAAAGAGTTTTCCAGAAAAATCCGCTATCTAAAATTTTTCTAGCTGTTCTTTTAGGGCTAAAGTGACCTCCATATGCATGAGAATGACAAAACGATAAAATTGATTTATATTCATGCTCAGGGACGCATTTTCTAATTATTTGATCTGAACAATATTTCCAGAGATATGGAGATTCCCAGAAATAATATTTGGCATCGCTACGTAGTTTTGATTTTTGAGAAAAAGAGAAATCTAAAGGAAAGTTACCTGTTGTGATATAATTCACTAAGTCGGCATACCAAGGTGTTGGGAGATTGGCTTGAAAGAGGTGTTCATCAGGAAAATCTTCTCTAATAGGTAAGTCTTCGGGCTCTTGCACTATTCTACTTAGGTGATCCGCTATGGCATTGTTGGCTCCTTTTCTATCTTTGATTGTTAGGTTAAATTCTTGTAAGAGCAAAACCCATCTAACTAGCCTAGGTTTTGATTCTTTTTTAGAGACTAAATACCTGCAGCGTGATCAGTGTAAATGATAACAGGAGACCCTATCACATAGCTTCTAAATTTGTCTAGTGCAAAAACTATGGCGAGAAATTCTTTTTCTGTGGTGGTGTAATTTGATTGTGCTTGATTTAGTGTTCTAGATGCAAAATAGATGGCATGCAATTTTTTGTCTACTCTTTGTCCTAAAACTGCTCCTAATGCTAAGTTACTAGCATCACGCATGATTTCAAATGGTAAATTCCAGTTAGGAGATTGAAGAATAGGAGTAGAGACTAACCTTTGTTTAAGCTCGTCAAATGCTCTTTTGCACTTGTCATCTATTATGAATGGCACATCTTTTTTAAGAAGAGAAGTTAGTGGTAAAGCAATTTTAGAAAAATCTTTTATGAATCTTCTATAAAAACCGGCGCTACTTAAAAATGATCTAACATCTTTAAGGCATGTTGGATATGGCAATTTTTGTATTACATTAATTTTAACTTCATCTAATTCTATTCCTTTAGATGATACTAGATGGCCTAGAACTATGCCATGAGAAACCATGAAATGACATTTTTCATAATTCAGAACTAAGTTGGTTTCTATGCATCTATTTAGAATTTGCTCTAAACTGTTCAAGCATGCATCAAAATTATCACCGTAAACAGTAAAATCATCCATGAAGACTTCTATACATTTTTCTATAAAATCTGAAAAGATGCTCATCATACAATGTTGGAATGTGCCAGGCGCATTACATAAACCAAAAGGCATACGCCTAAAAGCATAAGTATCATAATCGCATGTAAATGTTGTTTTACTTTGATCTTCGCATGCAATTGGAATTTGGTAAAATCCAGAAAAACCATCCAAAAAGCAAAAATACGACCTACCAGTTAAACGTTCTATCATTTGATCTAGAAAAGGTAAAGGAAAATGATCTTTCTTTGTTACCTCGTTTAGCTTGCGGTAGTCGATGCACATTCTCCATCCGTTTTGGACTCTTGTAGGAATCATTTCGCCTTTTTCATTCTTCATCACCGTCATCCCGGTCTTTTTAGGCACAACATGTATTGGGCTAACCCATGTACTATCGGGGACGGGGTAAATGATTCCAGCATCTTTTAATTTAAAGATTTCTTTCAAAACAACATCTTTCAACACAGGGTTTAACCGCCTTTGTGATTGGACTTTATCTTTTGCTCCTTCTTCTAATATTATTTGATGTGTGCAAAAAGAAGGGGAAATACCTTTAAGGTCTTCTAAAGTCCATCCAATTGCTTTTCTTTTGTTCTTTATGACTTGGATAAGTCTTTCTTCTTCTTCTTGGTGTAGTTCTTTCTAGATTATAACAGGAAACGTATTCTTTTCTCCTAAGAATACGTATTTCAGGTTGGGTGGGAGAGTCTTGAGCTCAATCCCTTGTTCCTAGGGAGAAAAGAAAAAAGTGTTAGAATTTATTCCATCAAGATTTGATTTTTCATCTGTTTCTACTTCTACTATCTCTTTTTCATCATCAATTTCATTTAAATCATGTTCAGAAAATTCAACATCGATAGGCAATTCTTCATATTCATCATGCAATTCTAGTGAGCATAAAGGTAGACATTCTTCAGGATATTTCATGGATTCGAAAATATTAAATGTCAGCCATCCTTGAAATGAGCTCTCTAGCCTCAGTAGGGGTTTTGTCAGCCAATGCACCACCTGCTGCAGCATCTACTGTATTTCTATCCATAGTTAGTAGTCTAGAATAGAAATATTGTATTAATGATGGATCAGAAATATGGTGATGGGGGAAGCTAGCGCAGAGCTCCTTAAACCTTTCCCAGTATTCAGATAAGGACTCCCCAAAAGCTTGCCTTGTTCCATAAATTTCTTTCCTAATATTATTGGCTCTAGAAGCAGGAAAGAACTTTTCTAAAAATTTCTTTTTAAGGCTTCCCCAAGTAGTGATGGACCCTGGCTCTAGATAGTAAAGCCATATTTTGGCTGTGTCAGTCAAAGAAAGTGGAAAGGCTCTCAAGTTAAGTTGTTCCTCTGAAACTCCGTGCGGTCTCATTGAGTCACAAACCATATGAAAGTCTTTGAGGTGTTTATGGGGGTTCTCTCCTGAACTATCCTTGTATATAGGTAAGAGATGGATTAGTCCAGGTTTGAGTTCGAAGGGTTGAGTGGTTGGGGGAATTACTATACAGAGGGGCCTTTGGTCCTCGTCAGGCTCGGAAAGCTCTCTTAAGGTTTTTTCTCTAACTTGGCCCATGGTTTCTCTATCAAGGTTTGGTTGTTCTAGATTAGGCTCTTGGTTTTCTATTGGATCTTGAGGGATATTATTGATGGTTTCTTCTCTCCTTTCTCTCCTAATCCTACGTATTTCCCTATTAAGGTCTTCAAAGAAAAAGAGTTCTTGGTTGGAAGAACGGGTCATACAAGGTTAAGGGAGAGAAAAAGAAATTCAAGTAACTCTTTTTGTTTTAAAGATTTTTTTTAGAAATTGAATATAGTAATCAAGAAGCTAAAATAAAATTTAAACCTAAAAGAATTAGAAAGTCATACCGTGCTCCCCAGCAACGGTGCCATTTTGGTCGAACTATAGGTCGAGCGATGAAAGTATAGTTTAAGAGGAGAGTTGTCGTACCCAAGGGAGCAAACCGTGCTTTCAAATTGGTATTAGGTTTAAAGTATAAAAGAAATAGAGCTTCAAGACTCGAAAAGAGTTAGTAGTAGGGGGGTTTGTTGTATGCGAGAAAAGAAAAGGAAAAAAAAGACAGTAAAGAAATGATGGAACGAGATAGAGTAGGCGGAATAGAGATCTATAGAATCTTTTTGTCTTCCTTAGAAAATGAAGTATGCGATAAGGACTAATAACAACTAAGTACACACTACTTGTCACAGAAACAACAATAATTAGAAACACACTTCTTTAAAGAATATGCGAGAAGGGGGCTATGCGATAAGGTATGTTTCAATCTATAACAAAGAATTGTCTCAGCGATCTATCTTTCTTGCAAATTGAATCATGAGATTTGAACAGAAAAGAATTAACCTAGATGCATTAATGTTTTAGCAATCATAATACATTTTTGGTTGAAACTTTAAACAGATAGGCGAGGAAATTCAATCAGAATGTAAACTTATCTCAGCGACTAAGTTTGACTCTAATCAAAATGCATAGAACATTCAAGATTCACTAAGCAAGTCAGCCTATACTTAGTGAAATTGAAGTGTATCACAATATTAGCATGCGAGAAGAGCAAAGTAGGCTTATTACTTATCTACCTGGTAATCAAGCAAGCAAAGCAATCACAATTTAATTTTTGAGCTCAGCGCTCTATGCGATATGATGAATTATAGTGCATGCAAGTTTAGGGCCTAGAAACCTAAAATTACCATGCGAATTTGGGATAATTGTGAAAGGAGAATACACAGTCGAAATGAAAGAAGGCGAGGAAGATACCTTTTGTTTCTCAAAGTAGGCGAGATAGAATTATTGACCTTATCAAAAAGTTAACTCCATTGAAATTCGGTTGACAAATTGTAAAACTCTTAAAATGCCTCAGCGGTCTAAACCAGAATTTTGCATAAATGAATTTCTATGGAGAATTTGGCAGAGTAAGGCTAAGGAAATATTATATGCAAAGGAGTATGAGAAATGAAAATTCTATAGACTTTGTATTATGAATTTGATATAAGATTCAAAGTAATTTGGAATGAAGTACATGGGGATATTTATAGGTTTTTATAGGAAGGCTAATTTGCAAAATAACTGTTATTTGATGGTTATTTTGTTACAATGGGCTTGGGCCTTGGGCCTTGGGCCTTGCGGGCTTGACGGTTATGCCAGATCGCATGCGAGCTGAATGGTGAGCTTGGCGAGCTGATGATATGCGGTGAAGCTTGCGAGCTTGAGTTAGCTGAATGAAGTGTGCGAGCTGGTGAATGAGTGTGTATGTATGTGGCAAAGTGAAGAGTGTACTTCTGCAGATGAAGTATTTCGCGAGGCTCAAGTCAGAAGGCAATGCCTTGTGGTGAAGGTAGGTTGCGTTGAGCCATGCGATCTTGAATTGGCTTTGCCGCGAAGAGGACTTGAATGCCTTAGGGAGATTACTGTTTTGCCTTTGACTTGTGTTTAGTCTATTTTGTCCGCAAGGAGCTTGTTTTAGCTCACTTTTGTGCATTAGGGCTTGTATAGGGGCTTTGTATCATATCCTATGTAAAAATACAACATTGATTAGTAATTGAAGCTTATTATTGAGAATTAGGATAGATATTTTTATACAAAAATAGTTCTATCAAGAAGGCATTAAAATTCTTGCTGAAACAGAGGGAAGTCCAACCTCAATTTCAGAAGTGGCTCACCAAACTCCTAGGCTACGATTTTGAAATCTTATACCAACCGGGCTTGCAGAATAAAGCAGCAGATGCCCTCTCAAGAGTGGAACCAAAGGAAGCTACTGAGGCTGAACTATCTACCATGTCCACTTGGATGTTATTAAGTACTGAAGCCATTCAGAAGGAAGTGAAAGAAGACCCTAATTTGCGGAAACTGATTGATAACTTGAAACTGAACCCAGAGGCTCATCCTAAGTACAAATGGGATAGGAAACGACTATGGTACAAAAATAGGTTGGTAATTCCCAAGCACTCCTCTATAATACCAACTCTACTGCACACTTTTCATGATTCCATCATGGGAGGCCATTCAGGGTTTCTAAGAACCTATAAAAGATTGACAGGGGAACTGTACTGGGAAGGGATGAAATTGGATGTTAAGAAATATGTTGAGCAGTGTGAGATATGTCAGCATAATAAAACAGATTCCACATTTCCAGCTGGATTACTACAACCTATTCCTATTCCTAATTTAATCTTAGAAGAATGGTCAATGGATTTTGTGGAAGGACTACCGATGTCAGGGCACATGAATGTAATTATGGTTGCGGTGGACCGACTGAGCAAATATGCCTACCTTATTACTCTCAAACATCCGTTCACAGCCAAACAAGTGGCAGCAGCTTTCATTGA

mRNA sequence

ATGATATCAGTTTCGGTATTAGCTTTACCAGACTGGTCATTGCCCTTTGTAGTGGAAACTAATGCTTCTGGAACAGGTTTAGGGGTTGTCCTATCTCAAAATGGCCATCCGATAGCTTTCTTCAGTAAAAAACTATCTCCCCGAGCACAAACTAAATCTATTTATGAAAGGAAATTGATGGCAGTGGTCCTAGCCTTTCAAAGATGGAGATATTATTTTCTGGGACGTCGTTTCACAATATTTTTATACAAAAATAGTTCTATCAAGAAGGCATTAAAATTCTTGCTGAAACAGAGGGAAGTCCAACCTCAATTTCAGAAGTGGCTCACCAAACTCCTAGGCTACGATTTTGAAATCTTATACCAACCGGGCTTGCAGAATAAAGCAGCAGATGCCCTCTCAAGAGTGGAACCAAAGGAAGCTACTGAGGCTGAACTATCTACCATGTCCACTTGGATGTTATTAAGTACTGAAGCCATTCAGAAGGAAGTGAAAGAAGACCCTAATTTGCGGAAACTGATTGATAACTTGAAACTGAACCCAGAGGCTCATCCTAACCAAACAAGTGGCAGCAGCTTTCATTGA

Coding sequence (CDS)

ATGATATCAGTTTCGGTATTAGCTTTACCAGACTGGTCATTGCCCTTTGTAGTGGAAACTAATGCTTCTGGAACAGGTTTAGGGGTTGTCCTATCTCAAAATGGCCATCCGATAGCTTTCTTCAGTAAAAAACTATCTCCCCGAGCACAAACTAAATCTATTTATGAAAGGAAATTGATGGCAGTGGTCCTAGCCTTTCAAAGATGGAGATATTATTTTCTGGGACGTCGTTTCACAATATTTTTATACAAAAATAGTTCTATCAAGAAGGCATTAAAATTCTTGCTGAAACAGAGGGAAGTCCAACCTCAATTTCAGAAGTGGCTCACCAAACTCCTAGGCTACGATTTTGAAATCTTATACCAACCGGGCTTGCAGAATAAAGCAGCAGATGCCCTCTCAAGAGTGGAACCAAAGGAAGCTACTGAGGCTGAACTATCTACCATGTCCACTTGGATGTTATTAAGTACTGAAGCCATTCAGAAGGAAGTGAAAGAAGACCCTAATTTGCGGAAACTGATTGATAACTTGAAACTGAACCCAGAGGCTCATCCTAACCAAACAAGTGGCAGCAGCTTTCATTGA

Protein sequence

MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLMAVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLNPEAHPNQTSGSSFH

Homology

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BLAST of PI0023509 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-20
Identity = 57/145 (39.31%), Postives = 88/145 (60.69%), Query Frame = 0


Query: 6   VLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLMAVVLA 65
           +L LPD+   FV+ T+AS   LG VLSQNGHPI+F S+ L+      S  E++L+A+V A
Sbjct: 498 ILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWA 557

Query: 66  FQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEILYQPGL 125
            + +R+Y LGR+F I     +S  + L++L   +E   + ++W  +L  Y F+I Y  G 
Sbjct: 558 TKTFRHYLLGRQFLI-----ASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGK 617

Query: 126 QNKAADALSRVEPKEATEAELSTMS 151
           +N  ADALSR++ +E   +E +  S
Sbjct: 618 ENSVADALSRIKIEENHHSEATQHS 637

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BLAST of PI0023509 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-19
Identity = 52/140 (37.14%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 6   VLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLMAVVLA 65
           +L +PD++  F + T+AS   LG VLSQ+GHP+++ S+ L+      S  E++L+A+V A
Sbjct: 499 ILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWA 558

Query: 66  FQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEILYQPGL 125
            + +R+Y LGR F I     SS  + L +L + ++   +  +W  KL  +DF+I Y  G 
Sbjct: 559 TKTFRHYLLGRHFEI-----SSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGK 618

Query: 126 QNKAADALSRVEPKEATEAE 146
           +N  ADALSR++ +E   +E
Sbjct: 619 ENCVADALSRIKLEETYLSE 633

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BLAST of PI0023509 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-13
Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 0


Query: 6   VLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLMAVVLA 65
           +L  PD+  PF + T+AS +G+G VLSQ G PI   S+ L    Q  +  ER+L+A+V A
Sbjct: 485 ILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWA 544

Query: 66  FQRWRYYFLG-RRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEILYQPG 125
             + + +  G R   IF     +  + L F +  R    + ++W + +  ++ ++ Y+PG
Sbjct: 545 LGKLQNFLYGSREINIF-----TDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKPG 604

Query: 126 LQNKAADALSR 136
            +N  ADALSR
Sbjct: 605 KENFVADALSR 610

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BLAST of PI0023509 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.5e-13
Identity = 45/143 (31.47%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQN----GHPIAFFSKKLSPRAQTKSIYE 60
           + S  +LA P ++ PF + T+AS   +G VLSQ+      PIA+ S+ L+   +  +  E
Sbjct: 420 LCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIE 479

Query: 61  RKLMAVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYD 120
           ++++A++ +    R Y  G   TI +Y +    + L F L  R    + ++W  ++  Y+
Sbjct: 480 KEMLAIIWSLDNLRAYLYGAG-TIKVYTD---HQPLTFALGNRNFNAKLKRWKARIEEYN 539

Query: 121 FEILYQPGLQNKAADALSRVEPK 140
            E++Y+PG  N  ADALSR+ P+
Sbjct: 540 CELIYKPGKSNVVADALSRIPPQ 558

[Close]

BLAST of PI0023509 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-09
Identity = 49/191 (25.65%), Postives = 94/191 (49.21%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNG-----HPIAFFSKKLSPRAQTKSIY 60
           ++S  VL   D+S   ++ET+AS   +G VLSQ       +P+ ++S K+S      S+ 
Sbjct: 693 LVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVS 752

Query: 61  ERKLMAVVLAFQRWRYYFLGRRFTIFLYKNSSIKKAL--KFLLKQREVQPQFQKWLTKLL 120
           +++++A++ + + WR+Y      TI  +K  +  + L  +   +      +  +W   L 
Sbjct: 753 DKEMLAIIKSLKHWRHYL---ESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 812

Query: 121 GYDFEILYQPGLQNKAADALSRVE------PKEATEAELSTMSTWMLLS--TEAIQKEVK 177
            ++FEI Y+PG  N  ADALSR+       PK++ +  ++ ++   +       +  E  
Sbjct: 813 DFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYT 872

[Close]

BLAST of PI0023509 vs. ExPASy TrEMBL
Match: A0A5D3C1I8 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00320 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.2e-59
Identity = 125/187 (66.84%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ +LAL DWSLPFVVET+ASG+GLG VLSQNGHPIAFF +KLSPR QTKSIY+R+LM
Sbjct: 182 MTTIPMLALSDWSLPFVVETDASGSGLGAVLSQNGHPIAFFRQKLSPRVQTKSIYKRELM 241

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
            VVLA Q+WRYY LGRRF I      S +KALKFLLKQREVQPQF+KWLTKLL YDFEIL
Sbjct: 242 VVVLAVQKWRYYLLGRRFIIM-----SDQKALKFLLKQREVQPQFKKWLTKLLAYDFEIL 301

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQ GLQNKAADALS+V+    T  EL+TM+T  ++  EA+ KEV+ED  L+K++  L+  
Sbjct: 302 YQLGLQNKAADALSKVD----TTPELNTMTTSRIVDMEAVAKEVEEDEELQKIVKQLQAT 359

Query: 181 PEAHPNQ 188
           P+A PN+
Sbjct: 362 PQAKPNK 359

[Close]

BLAST of PI0023509 vs. ExPASy TrEMBL
Match: A0A5A7UM57 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00430 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.2e-59
Identity = 125/187 (66.84%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ +LAL DWSLPFVVET+ASG+GLG VLSQNGHPIAFF +KLSPR QTKSIY+R+LM
Sbjct: 179 MTTIPMLALSDWSLPFVVETDASGSGLGAVLSQNGHPIAFFRQKLSPRVQTKSIYKRELM 238

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
            VVLA Q+WRYY LGRRF I      S +KALKFLLKQREVQPQF+KWLTKLL YDFEIL
Sbjct: 239 VVVLAVQKWRYYLLGRRFIIM-----SDQKALKFLLKQREVQPQFKKWLTKLLAYDFEIL 298

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQ GLQNKAADALS+V+    T  EL+TM+T  ++  EA+ KEV+ED  L+K++  L+  
Sbjct: 299 YQLGLQNKAADALSKVD----TTPELNTMTTSRIVDMEAVAKEVEEDEELQKIVKQLQAT 356

Query: 181 PEAHPNQ 188
           P+A PN+
Sbjct: 359 PQAKPNK 356

[Close]

BLAST of PI0023509 vs. ExPASy TrEMBL
Match: A0A5D3CPQ1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00210 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.1e-58
Identity = 123/181 (67.96%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ VLALPDWSLPF++ET+ASG+GLG VLSQN HPIAFFS+KLSPRAQ+KSIYER+LM
Sbjct: 63  MTTIPVLALPDWSLPFMIETDASGSGLGAVLSQNDHPIAFFSQKLSPRAQSKSIYERELM 122

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
            VVL+ Q+WR+Y LGRRFTI      S +KALKFLL+QREVQPQFQKWLTKLLGYDFEI+
Sbjct: 123 VVVLSVQKWRHYLLGRRFTIV-----SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEII 182

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQPGLQNKAADALSRVE       EL+TMST  ++  E + KEV++D  L+++   L++N
Sbjct: 183 YQPGLQNKAADALSRVE----HPLELNTMSTSGIVDMEIVTKEVEKDEELQQIAQQLQVN 234

Query: 181 P 182
           P
Sbjct: 243 P 234

[Close]

BLAST of PI0023509 vs. ExPASy TrEMBL
Match: A0A5A7TZ91 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G002180 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.9e-58
Identity = 121/181 (66.85%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ VLALPDWSLPF++ET+ASG+GLG VLSQNGHPIAFFS+KLSPRAQ+KS YER+LM
Sbjct: 63  MTTILVLALPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSFYERELM 122

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
           AVVL+ Q+WR+Y +GRRFTI      S +KALKFLL+QREVQPQFQKWLTKLLGYDFEIL
Sbjct: 123 AVVLSVQKWRHYLIGRRFTII-----SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL 182

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQPGLQNKAADALSRV+     ++EL+ MST  ++  E + KEV++D  L+ +   L+ +
Sbjct: 183 YQPGLQNKAADALSRVD----HQSELNAMSTAGIVDMETVTKEVEKDEELQLIAQQLQTD 234

Query: 181 P 182
           P
Sbjct: 243 P 234

[Close]

BLAST of PI0023509 vs. ExPASy TrEMBL
Match: A0A5D3C9J2 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001010 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.9e-58
Identity = 121/181 (66.85%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ VLALPDWSLPF++ET+ASG+GLG VLSQNGHPIAFFS+KLSPRAQ+KS YER+LM
Sbjct: 63  MTTILVLALPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSFYERELM 122

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
           AVVL+ Q+WR+Y +GRRFTI      S +KALKFLL+QREVQPQFQKWLTKLLGYDFEIL
Sbjct: 123 AVVLSVQKWRHYLIGRRFTII-----SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL 182

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQPGLQNKAADALSRV+     ++EL+ MST  ++  E + KEV++D  L+ +   L+ +
Sbjct: 183 YQPGLQNKAADALSRVD----HQSELNAMSTAGIVDMETVTKEVEKDEELQLIAQQLQTD 234

Query: 181 P 182
           P
Sbjct: 243 P 234

[Close]

BLAST of PI0023509 vs. NCBI nr
Match: TYK05225.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 8.7e-59
Identity = 125/187 (66.84%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ +LAL DWSLPFVVET+ASG+GLG VLSQNGHPIAFF +KLSPR QTKSIY+R+LM
Sbjct: 182 MTTIPMLALSDWSLPFVVETDASGSGLGAVLSQNGHPIAFFRQKLSPRVQTKSIYKRELM 241

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
            VVLA Q+WRYY LGRRF I      S +KALKFLLKQREVQPQF+KWLTKLL YDFEIL
Sbjct: 242 VVVLAVQKWRYYLLGRRFIIM-----SDQKALKFLLKQREVQPQFKKWLTKLLAYDFEIL 301

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQ GLQNKAADALS+V+    T  EL+TM+T  ++  EA+ KEV+ED  L+K++  L+  
Sbjct: 302 YQLGLQNKAADALSKVD----TTPELNTMTTSRIVDMEAVAKEVEEDEELQKIVKQLQAT 359

Query: 181 PEAHPNQ 188
           P+A PN+
Sbjct: 362 PQAKPNK 359

[Close]

BLAST of PI0023509 vs. NCBI nr
Match: KAA0056274.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 8.7e-59
Identity = 125/187 (66.84%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ +LAL DWSLPFVVET+ASG+GLG VLSQNGHPIAFF +KLSPR QTKSIY+R+LM
Sbjct: 179 MTTIPMLALSDWSLPFVVETDASGSGLGAVLSQNGHPIAFFRQKLSPRVQTKSIYKRELM 238

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
            VVLA Q+WRYY LGRRF I      S +KALKFLLKQREVQPQF+KWLTKLL YDFEIL
Sbjct: 239 VVVLAVQKWRYYLLGRRFIIM-----SDQKALKFLLKQREVQPQFKKWLTKLLAYDFEIL 298

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQ GLQNKAADALS+V+    T  EL+TM+T  ++  EA+ KEV+ED  L+K++  L+  
Sbjct: 299 YQLGLQNKAADALSKVD----TTPELNTMTTSRIVDMEAVAKEVEEDEELQKIVKQLQAT 356

Query: 181 PEAHPNQ 188
           P+A PN+
Sbjct: 359 PQAKPNK 356

[Close]

BLAST of PI0023509 vs. NCBI nr
Match: KAA0037227.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK13843.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 235.3 bits (599), Expect = 4.3e-58
Identity = 123/181 (67.96%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ VLALPDWSLPF++ET+ASG+GLG VLSQN HPIAFFS+KLSPRAQ+KSIYER+LM
Sbjct: 63  MTTIPVLALPDWSLPFMIETDASGSGLGAVLSQNDHPIAFFSQKLSPRAQSKSIYERELM 122

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
            VVL+ Q+WR+Y LGRRFTI      S +KALKFLL+QREVQPQFQKWLTKLLGYDFEI+
Sbjct: 123 VVVLSVQKWRHYLLGRRFTIV-----SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEII 182

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQPGLQNKAADALSRVE       EL+TMST  ++  E + KEV++D  L+++   L++N
Sbjct: 183 YQPGLQNKAADALSRVE----HPLELNTMSTSGIVDMEIVTKEVEKDEELQQIAQQLQVN 234

Query: 181 P 182
           P
Sbjct: 243 P 234

[Close]

BLAST of PI0023509 vs. NCBI nr
Match: TYK07972.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-57
Identity = 121/181 (66.85%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ VLALPDWSLPF++ET+ASG+GLG VLSQNGHPIAFFS+KLSPRAQ+KS YER+LM
Sbjct: 63  MTTILVLALPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSFYERELM 122

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
           AVVL+ Q+WR+Y +GRRFTI      S +KALKFLL+QREVQPQFQKWLTKLLGYDFEIL
Sbjct: 123 AVVLSVQKWRHYLIGRRFTII-----SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL 182

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQPGLQNKAADALSRV+     ++EL+ MST  ++  E + KEV++D  L+ +   L+ +
Sbjct: 183 YQPGLQNKAADALSRVD----HQSELNAMSTAGIVDMETVTKEVEKDEELQLIAQQLQTD 234

Query: 181 P 182
           P
Sbjct: 243 P 234

[Close]

BLAST of PI0023509 vs. NCBI nr
Match: KAA0048288.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-57
Identity = 121/181 (66.85%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 1   MISVSVLALPDWSLPFVVETNASGTGLGVVLSQNGHPIAFFSKKLSPRAQTKSIYERKLM 60
           M ++ VLALPDWSLPF++ET+ASG+GLG VLSQNGHPIAFFS+KLSPRAQ+KS YER+LM
Sbjct: 63  MTTILVLALPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSFYERELM 122

Query: 61  AVVLAFQRWRYYFLGRRFTIFLYKNSSIKKALKFLLKQREVQPQFQKWLTKLLGYDFEIL 120
           AVVL+ Q+WR+Y +GRRFTI      S +KALKFLL+QREVQPQFQKWLTKLLGYDFEIL
Sbjct: 123 AVVLSVQKWRHYLIGRRFTII-----SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIL 182

Query: 121 YQPGLQNKAADALSRVEPKEATEAELSTMSTWMLLSTEAIQKEVKEDPNLRKLIDNLKLN 180
           YQPGLQNKAADALSRV+     ++EL+ MST  ++  E + KEV++D  L+ +   L+ +
Sbjct: 183 YQPGLQNKAADALSRVD----HQSELNAMSTAGIVDMETVTKEVEKDEELQLIAQQLQTD 234

Query: 181 P 182
           P
Sbjct: 243 P 234

The following BLAST results are available for this feature:

BLAST of PI0023509 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	3.7e-20	39.31	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	7.0e-19	37.14	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P10401	5.7e-13	33.59	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
Q8I7P9	7.5e-13	31.47	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q9UR07	6.6e-09	25.65	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of PI0023509 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C1I8	4.2e-59	66.84	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7UM57	4.2e-59	66.84	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CPQ1	2.1e-58	67.96	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7TZ91	7.9e-58	66.85	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3C9J2	7.9e-58	66.85	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of PI0023509 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05225.1	8.7e-59	66.84	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0056274.1	8.7e-59	66.84	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0037227.1	4.3e-58	67.96	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK13843.1 Tran...	[more]
TYK07972.1	1.6e-57	66.85	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0048288.1	1.6e-57	66.85	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of PI0023509 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 11..81 e-value: 3.1E-8 score: 35.5
None	No IPR available	PANTHER	PTHR24559:SF384	SUBFAMILY NOT NAMED	coord: 6..144
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 6..144
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 17..135 e-value: 1.28626E-44 score: 142.246
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 2..80 e-value: 1.6E-23 score: 82.6
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023509.1	PI0023509.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding