PI0023479 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGCGGTCACAACTGGCCTACCCTCGGAGTCATCCACGCAACCCAGTGGTAAGAATCTGCCCCATGCAACTTTTCTTGCCGCTCACGCGCCATCTCTGTCAGGCGCGTGGGCCCACTTACCACCCTCCAATCATCTTATTGCCAGCCCATTGTCTCCCATGTGTCATCCCTGTCCAACCTCACACCCTCCTTGTCAGCCACCGCTAACCTCCAATTACGGACAACCGTCAATTCCGACAAACCACACTTCCCTGTCTTTTGATCCTTTACAGCAGCCATATATTCGTGATACCAAAATCGACCAAAACCACAACAGATTTGGGTTTGAAGTTGGCAAATCCTCGGTGCAATCTAAATCAACCAGCTTATCGATGTATTCCCAGCACAAGGTAACATCGTTTCCTACTTTAACATCAAATTATATAACTGGTTCTATGGCTCCCTCTACAGGGATCTTTCTAGGAGAGAAGCTGAATGGCCAAAATTTCTTCTCCTAGTCTCAATCGATCAAAATGTTCCTTGAGGGACATCAACAATTCGGTTTTCTAATAGGAGAGACCCACCATTTTCCACCTAGTAATGCTTAGGAACACTTATGGAGAGTAGAGGACTCCTTTGTTCGCTCCATGTTGATTAACAGTATGAAGACACCAATAGGCAAGCCTCTACTGTGTGCAGCTACTTCGAAGGATCTCTAGTACACTACTCAGAAACTCTACTCGAAGCGTCAGAATGCTTCTCGTTTGTATACCTTGAGGAAACAAGTCCATGAGTGCAAGCAAGGGACACAGGATGTAACCTCATACTTCATTGAACCTTCTTTACAGTATGGGATACCCCAAACGATGTTTTACAGTTTTCTAGGCAAGAAGAAGTAGATTGAATTTATGATTTTCTTGCAGACCTAAATCCTAAGTTTGACATTGTTTGTGGTCGTATTCTTGGCCAGAGACCCCTTTCCTCCCTAATGGAAGTATGCTATGAAGAAGTCCGTCTTGAAGAAGATTGCACAAATGCCATGAGTGTTCTAATTACCTCTGCCACTAACTCCGCTGCTTTTAGTGCTCGATCCTCGACCCATGTGAGAAAAATAATGAGAAACCAATCCTCATTTGTAAGCACTGCAAGAAACAGTGGCACACCAAGGACAAGTGTTGGAAACTCCATGGTCGTCCCACAGGAGGTAAGAAATGTTTCTCCAATGATAAACAGAACACAGGGTGTGCCTATGTGAGTGAGACTGCCAGCACCTCTCAGTCGTCTCTCATTGCAAGCACCTCTCAGTCGTCTGGTGCTACCGCAAGCCAAAATAGTCCTCCCACTCTAGAAGTCATTGCTCAGTCAGGTATGCTACAGTCCCTTGGTTTTATTAGTGTTGATGAGAAGAATCCCTGGATTCTAGACTCGGGGGCTACAGATCACTTGACAGGTTCTTCTGAGCACTTTGTTTCTTACGTTTCCTGTGTTGGTAATGAAAAAATCCAGATAGTTGATGGGTCTCTAGCCCCGATTGTTGGGAAGGGACAAATATTTCCCTTTGAAGGGCTCTCTCTCTAGGATGCTTTACATGTGCCTAAGTTTTCCTACAATTTGTTATCTATCGGCAAGATAACTCGTGCACTGAATTATAAAGCTATCTTCTTACCTGAATTTGTTTGTTTTCAAGACTTGAGCTTGGAGAGGACGATTGGCACTGCCTGGAATAGAAGGGGACTCTACATCCTTGATGATGATATCTCCGATAGTTGTATTTCTAGGACTAACTTGTTGTCTTCATATTTTACCATTTTCGGACAAGATTGTATGTTGTAGCATTTTCAGTTGGGCCACTCGAACTTCAATTATATGAAATATTTGTTTCCCCATTTATTTTCTAAAATCGATGTCTCCTCTCTTTCTTGTGATGTGTGTATTCGGGCCAAACAACATCGGTTTCATTTCCCTCACAACCATATAAACCCACACACCTTTTACCCTTATCCATAGTGATGTTTGGGGTCCATCCAAGGTATACCTCCTCTGGGAAATGGTAGTTCGTAACTTTCATTGTTGGTCACACCCGTCTTGCTTAGGTCTTCCTTATCATAGACAAATTTGAGGTCTCATCCGTTTCCCAAAATTTCTATCACACCATTGAAACGCAATTCAATACCAAAATTACAATTCTTCGGTGTGATAATGGTCAGAAATTCCAAAACCATAATCTTCGTGAGTTCCTAGCCTCCAAGGGGATTGTTCACCAAAGCTCATTCACCTAGACTCCTCAACAGAATGGGGTTTCTGAGCGAAAAAACCATCATCTTTTGAAAGTAGCTCCTCGGTCTCTTATGCTATCTTCTTCCTTTCCTTATACCTGTGGGGATGTTATTCCTACTGGAGTTATCTAATAAATAGAATGCCTTCTCGTGTCCTCCACCTTCAGACTCTCTTAGACTGCCTTAAATAGTCTTTTCCTTCTACCCGCCTAATCTCTGAGGTTCCTCTTCATTTATTTGGGTGTACAACATATGTCCATACCTTTGGCCCTAATCAAACAAAATTTATCCTTTGGGTTCAAGCTTGTGTGTTTGTTAGGTACCCCATTCATCAGTGCGGTTATAAATGCTTTCATCCTCCTTCCTAGAAATATTTTATCACCTTAGATGTTACTTTCTATGAGAACTGACCCTTCTTTCCCGTTAGCCATCTTCTGGGGGAGAGTGTAAGTGAAGAGTCTAACGAAACCTTAGAAGTTATTAAGCCTACCTTTAATATTGTGTCTAACCTTGATCCTTTCCCATAGTCCTACCCACAAACCAAGTCCCCTGGAAAACGTACTATAGAAGAAATCTCATAAAGGAAATCGAGTCCCCTACTACTTAGTTGGCTCCAGTCCAAGACTCTAAACTTCCTCGAGATCAAAGTATGACAAATCCTATTGAATCTTATGTTGATAATAAAATAAGTGAAAGTGACAGGTTTGATGTTGTTGTTCCTGAAAATGTGGAAGAAAATGATATGGTGATAAGACTAAGGTCAGAGCACAAACCAGTGGTAATGAAGCTGAACAGGGTCATACCGAGAAACTTGATGAATATGATCCTTCTCTGGATATTCCCATTGCAATGAGGAAAGGTACCAGGTCTTGCACAAGATATCTCATTTGTAACTATGTTTCCTATGATAACCTGTCTCTACAGTTCAAAGCTTTCACAACAAGCCTTGACTCTACTGTAATATCAATAAATATTCATACTGCTTTAGAATGTCCTGAGTGGAAGAATGTCGTCATGAAAAAGATGAAGGCTCTTGAAAAGAACAAGACTTGGGAGATTTATGCTCTACCCAAGGGACATAAAACTGTGGGATGAAAATGGGTGTTTCCTCTTAAATATAAGGAAGATGGAACCCTTGACAGACACAAGGTGAGGTTAGTTGCAAAAGGGTTTACTCAAACCTATGGTGTTGATTATTCTGAAACTTTTTTTCCAGTTGCTAAATTAAATACAGTTAGAGTATTCAAAAACTGACCTCTATATCAACTGGATGTTAAGAATGCTTTCCTAAATAGAGACCTAGTGGAGGACGTCTACATAAGCCCCCCACCAGGGTTTGAAGTCCAATTTGGTTGTCAAGTATGTAAACTTCAGAAATCGTTATATGGTCTGAAACAGTCACCTAGAGCATGGTTTGATAGGTTCACTACCTTTGTCAAGTCCCAAGGGTACAGTCAAGGGCACTCTGACCATATTTTGTTTACAAAGGTCTTCAAGGCTGGGAAGATCATAGTTCTGATTATGTATTTAATGACATCGTTTTATCTGGAGATGATTAGGATGAAATTATCCAACTGAAACAGAGAATGGGTAATGAATTTGAAATCAAGGACTTAGAAATTTTGAAATACTTTCTTGGAATGGAGGTGGCCAGATCTAAAGAAGGTATCTCCATATTTCAGAGAAAGTATACCCTTAATTTGCTGACCGAGACAGGTATGCTGGGATGTTGTCCTCCCAACACCCATTGAATTCAACTGTAAACTGGGAAATTTAGGTGATCAAGTTCCAGTTGATAAAGAACAATATCAGCACCTTGTGGGTAAGCTAATTTACTTGTCCATACTCGACCAGATATTTCCTTTGCTATGAGTGTTGTCAGTTAGTTTATGCAGGCTCTCTGTGAGGAACACATTTAAAGCTGTCAATAGCCTTTTAGGTAGAATAATGAAGCCTTAACGCAAAGAATAGAAGGAAAATAGTGCAATAAAGTAGAAATATTGGATAGTTATGCTTCGCAGATCATAAAAGAGCTTTTATTCCTATTTTATGCATTTTCTATGTTTAAATATAGGCTTTTAACCGAAAAGAGGAGTGGTCAGGCGACGAAGCGCTAGGTGAGAAATTATGCGAACAAGTAGGAGATCATCAACGCAAAGCTACACGATTTTGA ATGCTGGCGGTCACAACTGGCCTACCCTCGGAGTCATCCACGCAACCCAGTGGTAAGAATCTGCCCCATGCAACTTTTCTTGCCGCTCACGCGCCATCTCTGTCAGGCGCGTGGGCCCACTTACCACCCTCCAATCATCTTATTGCCAGCCCATTGTCTCCCATGTGTCATCCCTGTCCAACCTCACACCCTCCTTGTCAGCCACCGCTAACCTCCAATTACGGACAACCGTCAATTCCGACAAACCACACTTCCCTGTCTTTTGATCCTTTACAGCAGCCATATATTCGTGATACCAAAATCGACCAAAACCACAACAGATTTGGGTTTGAAGTTGGCAAATCCTCGGTGCAATCTAAATCAACCAGCTTATCGATGTATTCCCAGCACAAGAACACAGGGTGTGCCTATGTGAGTGAGACTGCCAGCACCTCTCAGTCGTCTCTCATTGCAAGCACCTCTCAGTCGTCTGGTGCTACCGCAAGCCAAAATAGTCCTCCCACTCTAGAAGTCATTGCTCAGTCAGTCCAAGACTCTAAACTTCCTCGAGATCAAAGTATGACAAATCCTATTGAATCTTATGTTGATAATAAAATAAGTGAAAGTGACAGGTTTGATGTTGTTGTTCCTGAAAATGTGGAAGAAAATGATATGGTGATAAGACTAAGGTCAGAGCACAAACCAGTGGCTTTTAACCGAAAAGAGGAGTGGTCAGGCGACGAAGCGCTAGGTGAGAAATTATGCGAACAAGTAGGAGATCATCAACGCAAAGCTACACGATTTTGA ATGCTGGCGGTCACAACTGGCCTACCCTCGGAGTCATCCACGCAACCCAGTGGTAAGAATCTGCCCCATGCAACTTTTCTTGCCGCTCACGCGCCATCTCTGTCAGGCGCGTGGGCCCACTTACCACCCTCCAATCATCTTATTGCCAGCCCATTGTCTCCCATGTGTCATCCCTGTCCAACCTCACACCCTCCTTGTCAGCCACCGCTAACCTCCAATTACGGACAACCGTCAATTCCGACAAACCACACTTCCCTGTCTTTTGATCCTTTACAGCAGCCATATATTCGTGATACCAAAATCGACCAAAACCACAACAGATTTGGGTTTGAAGTTGGCAAATCCTCGGTGCAATCTAAATCAACCAGCTTATCGATGTATTCCCAGCACAAGAACACAGGGTGTGCCTATGTGAGTGAGACTGCCAGCACCTCTCAGTCGTCTCTCATTGCAAGCACCTCTCAGTCGTCTGGTGCTACCGCAAGCCAAAATAGTCCTCCCACTCTAGAAGTCATTGCTCAGTCAGTCCAAGACTCTAAACTTCCTCGAGATCAAAGTATGACAAATCCTATTGAATCTTATGTTGATAATAAAATAAGTGAAAGTGACAGGTTTGATGTTGTTGTTCCTGAAAATGTGGAAGAAAATGATATGGTGATAAGACTAAGGTCAGAGCACAAACCAGTGGCTTTTAACCGAAAAGAGGAGTGGTCAGGCGACGAAGCGCTAGGTGAGAAATTATGCGAACAAGTAGGAGATCATCAACGCAAAGCTACACGATTTTGA MLAVTTGLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPLSPMCHPCPTSHPPCQPPLTSNYGQPSIPTNHTSLSFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSVQDSKLPRDQSMTNPIESYVDNKISESDRFDVVVPENVEENDMVIRLRSEHKPVAFNRKEEWSGDEALGEKLCEQVGDHQRKATRF Homology
BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5A7V6G9 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00350 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.4e-11 Identity = 81/245 (33.06%), Postives = 101/245 (41.22%), Query Frame = 0
BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5D3DBU1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00060 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10 Identity = 59/136 (43.38%), Postives = 74/136 (54.41%), Query Frame = 0
BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5D3BVA8 (TMV resistance protein N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001460 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 8.3e-10 Identity = 55/133 (41.35%), Postives = 69/133 (51.88%), Query Frame = 0
BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5D3CAC0 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00110 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08 Identity = 75/204 (36.76%), Postives = 91/204 (44.61%), Query Frame = 0
BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5A7TBP7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00430 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08 Identity = 82/243 (33.74%), Postives = 103/243 (42.39%), Query Frame = 0
BLAST of PI0023479 vs. NCBI nr
Match: KAA0060550.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYK00793.1 Integrase, catalytic core [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 6.9e-11 Identity = 71/197 (36.04%), Postives = 95/197 (48.22%), Query Frame = 0
BLAST of PI0023479 vs. NCBI nr
Match: KAA0061289.1 (hypothetical protein E6C27_scaffold455G001330 [Cucumis melo var. makuwa] >TYK09866.1 hypothetical protein E5676_scaffold39G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 6.9e-11 Identity = 81/245 (33.06%), Postives = 101/245 (41.22%), Query Frame = 0
BLAST of PI0023479 vs. NCBI nr
Match: KAA0048797.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK20749.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-10 Identity = 59/136 (43.38%), Postives = 74/136 (54.41%), Query Frame = 0
BLAST of PI0023479 vs. NCBI nr
Match: KAA0038337.1 (UBN2_3 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.1 bits (183), Expect = 1.0e-09 Identity = 55/122 (45.08%), Postives = 68/122 (55.74%), Query Frame = 0
BLAST of PI0023479 vs. NCBI nr
Match: TYJ97057.1 (Beta-galactosidase [Cucumis melo var. makuwa]) HSP 1 Score: 75.1 bits (183), Expect = 1.0e-09 Identity = 55/122 (45.08%), Postives = 68/122 (55.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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