PI0023479 (gene) Melon (PI 482460) v1

Overview
NamePI0023479
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionBeta-galactosidase
Locationchr11: 25041943 .. 25046374 (-)
RNA-Seq ExpressionPI0023479
SyntenyPI0023479
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGCGGTCACAACTGGCCTACCCTCGGAGTCATCCACGCAACCCAGTGGTAAGAATCTGCCCCATGCAACTTTTCTTGCCGCTCACGCGCCATCTCTGTCAGGCGCGTGGGCCCACTTACCACCCTCCAATCATCTTATTGCCAGCCCATTGTCTCCCATGTGTCATCCCTGTCCAACCTCACACCCTCCTTGTCAGCCACCGCTAACCTCCAATTACGGACAACCGTCAATTCCGACAAACCACACTTCCCTGTCTTTTGATCCTTTACAGCAGCCATATATTCGTGATACCAAAATCGACCAAAACCACAACAGATTTGGGTTTGAAGTTGGCAAATCCTCGGTGCAATCTAAATCAACCAGCTTATCGATGTATTCCCAGCACAAGGTAACATCGTTTCCTACTTTAACATCAAATTATATAACTGGTTCTATGGCTCCCTCTACAGGGATCTTTCTAGGAGAGAAGCTGAATGGCCAAAATTTCTTCTCCTAGTCTCAATCGATCAAAATGTTCCTTGAGGGACATCAACAATTCGGTTTTCTAATAGGAGAGACCCACCATTTTCCACCTAGTAATGCTTAGGAACACTTATGGAGAGTAGAGGACTCCTTTGTTCGCTCCATGTTGATTAACAGTATGAAGACACCAATAGGCAAGCCTCTACTGTGTGCAGCTACTTCGAAGGATCTCTAGTACACTACTCAGAAACTCTACTCGAAGCGTCAGAATGCTTCTCGTTTGTATACCTTGAGGAAACAAGTCCATGAGTGCAAGCAAGGGACACAGGATGTAACCTCATACTTCATTGAACCTTCTTTACAGTATGGGATACCCCAAACGATGTTTTACAGTTTTCTAGGCAAGAAGAAGTAGATTGAATTTATGATTTTCTTGCAGACCTAAATCCTAAGTTTGACATTGTTTGTGGTCGTATTCTTGGCCAGAGACCCCTTTCCTCCCTAATGGAAGTATGCTATGAAGAAGTCCGTCTTGAAGAAGATTGCACAAATGCCATGAGTGTTCTAATTACCTCTGCCACTAACTCCGCTGCTTTTAGTGCTCGATCCTCGACCCATGTGAGAAAAATAATGAGAAACCAATCCTCATTTGTAAGCACTGCAAGAAACAGTGGCACACCAAGGACAAGTGTTGGAAACTCCATGGTCGTCCCACAGGAGGTAAGAAATGTTTCTCCAATGATAAACAGAACACAGGGTGTGCCTATGTGAGTGAGACTGCCAGCACCTCTCAGTCGTCTCTCATTGCAAGCACCTCTCAGTCGTCTGGTGCTACCGCAAGCCAAAATAGTCCTCCCACTCTAGAAGTCATTGCTCAGTCAGGTATGCTACAGTCCCTTGGTTTTATTAGTGTTGATGAGAAGAATCCCTGGATTCTAGACTCGGGGGCTACAGATCACTTGACAGGTTCTTCTGAGCACTTTGTTTCTTACGTTTCCTGTGTTGGTAATGAAAAAATCCAGATAGTTGATGGGTCTCTAGCCCCGATTGTTGGGAAGGGACAAATATTTCCCTTTGAAGGGCTCTCTCTCTAGGATGCTTTACATGTGCCTAAGTTTTCCTACAATTTGTTATCTATCGGCAAGATAACTCGTGCACTGAATTATAAAGCTATCTTCTTACCTGAATTTGTTTGTTTTCAAGACTTGAGCTTGGAGAGGACGATTGGCACTGCCTGGAATAGAAGGGGACTCTACATCCTTGATGATGATATCTCCGATAGTTGTATTTCTAGGACTAACTTGTTGTCTTCATATTTTACCATTTTCGGACAAGATTGTATGTTGTAGCATTTTCAGTTGGGCCACTCGAACTTCAATTATATGAAATATTTGTTTCCCCATTTATTTTCTAAAATCGATGTCTCCTCTCTTTCTTGTGATGTGTGTATTCGGGCCAAACAACATCGGTTTCATTTCCCTCACAACCATATAAACCCACACACCTTTTACCCTTATCCATAGTGATGTTTGGGGTCCATCCAAGGTATACCTCCTCTGGGAAATGGTAGTTCGTAACTTTCATTGTTGGTCACACCCGTCTTGCTTAGGTCTTCCTTATCATAGACAAATTTGAGGTCTCATCCGTTTCCCAAAATTTCTATCACACCATTGAAACGCAATTCAATACCAAAATTACAATTCTTCGGTGTGATAATGGTCAGAAATTCCAAAACCATAATCTTCGTGAGTTCCTAGCCTCCAAGGGGATTGTTCACCAAAGCTCATTCACCTAGACTCCTCAACAGAATGGGGTTTCTGAGCGAAAAAACCATCATCTTTTGAAAGTAGCTCCTCGGTCTCTTATGCTATCTTCTTCCTTTCCTTATACCTGTGGGGATGTTATTCCTACTGGAGTTATCTAATAAATAGAATGCCTTCTCGTGTCCTCCACCTTCAGACTCTCTTAGACTGCCTTAAATAGTCTTTTCCTTCTACCCGCCTAATCTCTGAGGTTCCTCTTCATTTATTTGGGTGTACAACATATGTCCATACCTTTGGCCCTAATCAAACAAAATTTATCCTTTGGGTTCAAGCTTGTGTGTTTGTTAGGTACCCCATTCATCAGTGCGGTTATAAATGCTTTCATCCTCCTTCCTAGAAATATTTTATCACCTTAGATGTTACTTTCTATGAGAACTGACCCTTCTTTCCCGTTAGCCATCTTCTGGGGGAGAGTGTAAGTGAAGAGTCTAACGAAACCTTAGAAGTTATTAAGCCTACCTTTAATATTGTGTCTAACCTTGATCCTTTCCCATAGTCCTACCCACAAACCAAGTCCCCTGGAAAACGTACTATAGAAGAAATCTCATAAAGGAAATCGAGTCCCCTACTACTTAGTTGGCTCCAGTCCAAGACTCTAAACTTCCTCGAGATCAAAGTATGACAAATCCTATTGAATCTTATGTTGATAATAAAATAAGTGAAAGTGACAGGTTTGATGTTGTTGTTCCTGAAAATGTGGAAGAAAATGATATGGTGATAAGACTAAGGTCAGAGCACAAACCAGTGGTAATGAAGCTGAACAGGGTCATACCGAGAAACTTGATGAATATGATCCTTCTCTGGATATTCCCATTGCAATGAGGAAAGGTACCAGGTCTTGCACAAGATATCTCATTTGTAACTATGTTTCCTATGATAACCTGTCTCTACAGTTCAAAGCTTTCACAACAAGCCTTGACTCTACTGTAATATCAATAAATATTCATACTGCTTTAGAATGTCCTGAGTGGAAGAATGTCGTCATGAAAAAGATGAAGGCTCTTGAAAAGAACAAGACTTGGGAGATTTATGCTCTACCCAAGGGACATAAAACTGTGGGATGAAAATGGGTGTTTCCTCTTAAATATAAGGAAGATGGAACCCTTGACAGACACAAGGTGAGGTTAGTTGCAAAAGGGTTTACTCAAACCTATGGTGTTGATTATTCTGAAACTTTTTTTCCAGTTGCTAAATTAAATACAGTTAGAGTATTCAAAAACTGACCTCTATATCAACTGGATGTTAAGAATGCTTTCCTAAATAGAGACCTAGTGGAGGACGTCTACATAAGCCCCCCACCAGGGTTTGAAGTCCAATTTGGTTGTCAAGTATGTAAACTTCAGAAATCGTTATATGGTCTGAAACAGTCACCTAGAGCATGGTTTGATAGGTTCACTACCTTTGTCAAGTCCCAAGGGTACAGTCAAGGGCACTCTGACCATATTTTGTTTACAAAGGTCTTCAAGGCTGGGAAGATCATAGTTCTGATTATGTATTTAATGACATCGTTTTATCTGGAGATGATTAGGATGAAATTATCCAACTGAAACAGAGAATGGGTAATGAATTTGAAATCAAGGACTTAGAAATTTTGAAATACTTTCTTGGAATGGAGGTGGCCAGATCTAAAGAAGGTATCTCCATATTTCAGAGAAAGTATACCCTTAATTTGCTGACCGAGACAGGTATGCTGGGATGTTGTCCTCCCAACACCCATTGAATTCAACTGTAAACTGGGAAATTTAGGTGATCAAGTTCCAGTTGATAAAGAACAATATCAGCACCTTGTGGGTAAGCTAATTTACTTGTCCATACTCGACCAGATATTTCCTTTGCTATGAGTGTTGTCAGTTAGTTTATGCAGGCTCTCTGTGAGGAACACATTTAAAGCTGTCAATAGCCTTTTAGGTAGAATAATGAAGCCTTAACGCAAAGAATAGAAGGAAAATAGTGCAATAAAGTAGAAATATTGGATAGTTATGCTTCGCAGATCATAAAAGAGCTTTTATTCCTATTTTATGCATTTTCTATGTTTAAATATAGGCTTTTAACCGAAAAGAGGAGTGGTCAGGCGACGAAGCGCTAGGTGAGAAATTATGCGAACAAGTAGGAGATCATCAACGCAAAGCTACACGATTTTGA

mRNA sequence

ATGCTGGCGGTCACAACTGGCCTACCCTCGGAGTCATCCACGCAACCCAGTGGTAAGAATCTGCCCCATGCAACTTTTCTTGCCGCTCACGCGCCATCTCTGTCAGGCGCGTGGGCCCACTTACCACCCTCCAATCATCTTATTGCCAGCCCATTGTCTCCCATGTGTCATCCCTGTCCAACCTCACACCCTCCTTGTCAGCCACCGCTAACCTCCAATTACGGACAACCGTCAATTCCGACAAACCACACTTCCCTGTCTTTTGATCCTTTACAGCAGCCATATATTCGTGATACCAAAATCGACCAAAACCACAACAGATTTGGGTTTGAAGTTGGCAAATCCTCGGTGCAATCTAAATCAACCAGCTTATCGATGTATTCCCAGCACAAGAACACAGGGTGTGCCTATGTGAGTGAGACTGCCAGCACCTCTCAGTCGTCTCTCATTGCAAGCACCTCTCAGTCGTCTGGTGCTACCGCAAGCCAAAATAGTCCTCCCACTCTAGAAGTCATTGCTCAGTCAGTCCAAGACTCTAAACTTCCTCGAGATCAAAGTATGACAAATCCTATTGAATCTTATGTTGATAATAAAATAAGTGAAAGTGACAGGTTTGATGTTGTTGTTCCTGAAAATGTGGAAGAAAATGATATGGTGATAAGACTAAGGTCAGAGCACAAACCAGTGGCTTTTAACCGAAAAGAGGAGTGGTCAGGCGACGAAGCGCTAGGTGAGAAATTATGCGAACAAGTAGGAGATCATCAACGCAAAGCTACACGATTTTGA

Coding sequence (CDS)

ATGCTGGCGGTCACAACTGGCCTACCCTCGGAGTCATCCACGCAACCCAGTGGTAAGAATCTGCCCCATGCAACTTTTCTTGCCGCTCACGCGCCATCTCTGTCAGGCGCGTGGGCCCACTTACCACCCTCCAATCATCTTATTGCCAGCCCATTGTCTCCCATGTGTCATCCCTGTCCAACCTCACACCCTCCTTGTCAGCCACCGCTAACCTCCAATTACGGACAACCGTCAATTCCGACAAACCACACTTCCCTGTCTTTTGATCCTTTACAGCAGCCATATATTCGTGATACCAAAATCGACCAAAACCACAACAGATTTGGGTTTGAAGTTGGCAAATCCTCGGTGCAATCTAAATCAACCAGCTTATCGATGTATTCCCAGCACAAGAACACAGGGTGTGCCTATGTGAGTGAGACTGCCAGCACCTCTCAGTCGTCTCTCATTGCAAGCACCTCTCAGTCGTCTGGTGCTACCGCAAGCCAAAATAGTCCTCCCACTCTAGAAGTCATTGCTCAGTCAGTCCAAGACTCTAAACTTCCTCGAGATCAAAGTATGACAAATCCTATTGAATCTTATGTTGATAATAAAATAAGTGAAAGTGACAGGTTTGATGTTGTTGTTCCTGAAAATGTGGAAGAAAATGATATGGTGATAAGACTAAGGTCAGAGCACAAACCAGTGGCTTTTAACCGAAAAGAGGAGTGGTCAGGCGACGAAGCGCTAGGTGAGAAATTATGCGAACAAGTAGGAGATCATCAACGCAAAGCTACACGATTTTGA

Protein sequence

MLAVTTGLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPLSPMCHPCPTSHPPCQPPLTSNYGQPSIPTNHTSLSFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSVQDSKLPRDQSMTNPIESYVDNKISESDRFDVVVPENVEENDMVIRLRSEHKPVAFNRKEEWSGDEALGEKLCEQVGDHQRKATRF
Homology
BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5A7V6G9 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00350 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.4e-11
Identity = 81/245 (33.06%), Postives = 101/245 (41.22%), Query Frame = 0

Query: 7   GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPT 66
           G PS  S QPSG+        + HAP LSG WA++PPS +L A P+     SP+    P+
Sbjct: 2   GQPSPPSAQPSGQK-------SLHAPPLSGVWAYVPPSMNLTAHPICFYTSSPVQPSHPS 61

Query: 67  SHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQ 126
            HPP   P  +   QPS  +N    T+LS DPLQQP+      DQ+HNR G E G+S V 
Sbjct: 62  GHPPSHVPPIAVRQQPSKLSNLYSSTNLSIDPLQQPFFYRNGADQHHNRSGIEAGESLVP 121

Query: 127 S---------------------------KSTSLSMYSQH-----KNTGCAYVSETASTSQ 183
           S                             T L MYS++      N    Y++ + + S 
Sbjct: 122 SGYGQSCVRGLRINQTYRRVVFEVSTSLAQTDLPMYSKNPIISLSNVPSNYITNSVAFSA 181

BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5D3DBU1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00060 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10
Identity = 59/136 (43.38%), Postives = 74/136 (54.41%), Query Frame = 0

Query: 113 GKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVI 172
           G+SS   +    S  ++ +N+ CAYVSE         I  TSQS+G TASQN P TL VI
Sbjct: 86  GRSSTHDRGKKHSS-NKKQNSRCAYVSE---------ITGTSQSTGPTASQNRPRTLRVI 145

Query: 173 AQSV------------------------------QDSKLPRDQSMTNPIESYVDNKISES 219
           AQSV                              QDS+ P+DQ M NPIE+ VDNK+SE+
Sbjct: 146 AQSVLTTNQVPWKTYYKRNLKEEIESSASQSTPDQDSEPPQDQGMENPIETCVDNKMSEN 205

BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5D3BVA8 (TMV resistance protein N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001460 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 8.3e-10
Identity = 55/133 (41.35%), Postives = 69/133 (51.88%), Query Frame = 0

Query: 7   GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPT 66
           G PS  S QPSG+          HAP LS AWAH PPS +L A P+     SP+    P+
Sbjct: 47  GQPSPPSAQPSGQK-------PLHAPPLSSAWAHTPPSVNLTAHPIRFYTSSPVQPSHPS 106

Query: 67  SHPP--------CQPP--LTSNYGQPSIPT-----NHTSLSFDPLQQPYIRDTKIDQNHN 120
            HPP         Q P  L+S Y   S+ +     + T+LS DPLQQP+    + DQ+HN
Sbjct: 107 GHPPPHASPIAVGQKPSKLSSVYNSASLYSSANLYSSTNLSVDPLQQPFFYRNRADQHHN 166

BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5D3CAC0 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00110 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08
Identity = 75/204 (36.76%), Postives = 91/204 (44.61%), Query Frame = 0

Query: 7   GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPT 66
           G P   S Q SG+          HA  LSGAWAH     +LIA P+     SP+    P+
Sbjct: 2   GQPPPLSAQISGQK-------PIHASPLSGAWAHASLPVNLIAHPIRFYASSPVQPSHPS 61

Query: 67  SHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQ 126
            HPP      +   QPS  +N     +L  DPLQQP+    + +Q+HNR   EVG+ S  
Sbjct: 62  GHPPPHALHIAVGQQPSKLSNLYSSANLFVDPLQQPFCYRNEANQHHNRLWIEVGEPSAP 121

Query: 127 S---------------------------KSTSLSMYSQHKNTGCAYVSETASTSQSSLIA 176
           S                             T L MYS++ N G   V ETASTSQ  LI 
Sbjct: 122 SGYGQLYVHGLRINHTYRRAVFEVNTSLAQTDLLMYSKNSNLGRTDVKETASTSQ--LI- 181

BLAST of PI0023479 vs. ExPASy TrEMBL
Match: A0A5A7TBP7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00430 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08
Identity = 82/243 (33.74%), Postives = 103/243 (42.39%), Query Frame = 0

Query: 7   GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPT 66
           G PS SS QPSG+          HAP  S AWAH PP  +L A P+     SP+    P+
Sbjct: 2   GQPSSSSAQPSGQK-------PLHAPPFSSAWAHTPPFVNLTAHPIRFYASSPVQPSHPS 61

Query: 67  SH-PPCQPP---------LTSNYGQPSIPT-----NHTSLSFDPLQQPYIRDTKIDQNHN 126
            H PP   P         L+S Y   S+ +     + T+LS DPLQQP+    + DQ+HN
Sbjct: 62  GHLPPHASPIAVGQKPSKLSSLYSSTSLYSSANLYSSTNLSVDPLQQPFFYRNRADQHHN 121

Query: 127 RFGFEVGKSSVQS----------------------KSTSLS-----MYSQH-----KNTG 176
           R G E G+SS  S                       S SL+     MYS++      N  
Sbjct: 122 RLGIEAGESSAPSGYGQPYVRGLRINQTYRRAVFEVSNSLAQIDIPMYSKNPVISLPNVF 181

BLAST of PI0023479 vs. NCBI nr
Match: KAA0060550.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYK00793.1 Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-11
Identity = 71/197 (36.04%), Postives = 95/197 (48.22%), Query Frame = 0

Query: 7   GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL----SPMCHPC-PT 66
           G PS  S Q SG+          H P L   WAH+PP  +L A P+    S    P  P 
Sbjct: 2   GQPSPPSMQSSGQK-------RLHVPPLLDVWAHVPPFINLTAHPICFYASSSVQPSHPF 61

Query: 67  SHPPCQPPLTSNYGQPSIPT---NHTSLSFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQ 126
            HPP   P      QPS  +   N+ +LS DPLQQ +    + DQ+H+R G E G+SS  
Sbjct: 62  GHPPPHVPSIIAEQQPSKLSNLYNNVNLSVDPLQQSFFYRKRADQHHDRSGIEAGESS-- 121

Query: 127 SKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSVQD 186
           + S +   +++ +N+GC  V ET          STSQ  G TASQ S PTL  IAQS   
Sbjct: 122 APSGNKRFFNEQQNSGCTDVRET---------VSTSQPIGPTASQISSPTLSAIAQSASK 180

Query: 187 SKLPRDQSMTNPIESYV 196
             + ++     P ++ V
Sbjct: 182 GIVHQNSCTYTPHQNRV 180

BLAST of PI0023479 vs. NCBI nr
Match: KAA0061289.1 (hypothetical protein E6C27_scaffold455G001330 [Cucumis melo var. makuwa] >TYK09866.1 hypothetical protein E5676_scaffold39G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-11
Identity = 81/245 (33.06%), Postives = 101/245 (41.22%), Query Frame = 0

Query: 7   GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPT 66
           G PS  S QPSG+        + HAP LSG WA++PPS +L A P+     SP+    P+
Sbjct: 2   GQPSPPSAQPSGQK-------SLHAPPLSGVWAYVPPSMNLTAHPICFYTSSPVQPSHPS 61

Query: 67  SHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQ 126
            HPP   P  +   QPS  +N    T+LS DPLQQP+      DQ+HNR G E G+S V 
Sbjct: 62  GHPPSHVPPIAVRQQPSKLSNLYSSTNLSIDPLQQPFFYRNGADQHHNRSGIEAGESLVP 121

Query: 127 S---------------------------KSTSLSMYSQH-----KNTGCAYVSETASTSQ 183
           S                             T L MYS++      N    Y++ + + S 
Sbjct: 122 SGYGQSCVRGLRINQTYRRVVFEVSTSLAQTDLPMYSKNPIISLSNVPSNYITNSVAFSA 181

BLAST of PI0023479 vs. NCBI nr
Match: KAA0048797.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK20749.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-10
Identity = 59/136 (43.38%), Postives = 74/136 (54.41%), Query Frame = 0

Query: 113 GKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVI 172
           G+SS   +    S  ++ +N+ CAYVSE         I  TSQS+G TASQN P TL VI
Sbjct: 86  GRSSTHDRGKKHSS-NKKQNSRCAYVSE---------ITGTSQSTGPTASQNRPRTLRVI 145

Query: 173 AQSV------------------------------QDSKLPRDQSMTNPIESYVDNKISES 219
           AQSV                              QDS+ P+DQ M NPIE+ VDNK+SE+
Sbjct: 146 AQSVLTTNQVPWKTYYKRNLKEEIESSASQSTPDQDSEPPQDQGMENPIETCVDNKMSEN 205

BLAST of PI0023479 vs. NCBI nr
Match: KAA0038337.1 (UBN2_3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-09
Identity = 55/122 (45.08%), Postives = 68/122 (55.74%), Query Frame = 0

Query: 7   GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPT 66
           G  S  STQPSG+          HAP LSGAWA+  PS +L A P+     SP+    P+
Sbjct: 17  GQHSPPSTQPSGQK-------PLHAPPLSGAWAYASPSVNLTAHPIRFYASSPVQPSHPS 76

Query: 67  SHPPCQ-PPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRDTKIDQNHNRFGFEVGKSSV 120
            HPP   PP+T+   QPS  +N    T+LS DPLQQP+      DQ+HNR G E G+SS 
Sbjct: 77  GHPPPHAPPITAGQ-QPSKLSNLYSSTNLSVDPLQQPFFYRNGADQHHNRSGIEAGESSA 130

BLAST of PI0023479 vs. NCBI nr
Match: TYJ97057.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-09
Identity = 55/122 (45.08%), Postives = 68/122 (55.74%), Query Frame = 0

Query: 7   GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPT 66
           G  S  STQPSG+          HAP LSGAWA+  PS +L A P+     SP+    P+
Sbjct: 17  GQHSPPSTQPSGQK-------PLHAPPLSGAWAYASPSVNLTAHPIRFYASSPVQPSHPS 76

Query: 67  SHPPCQ-PPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRDTKIDQNHNRFGFEVGKSSV 120
            HPP   PP+T+   QPS  +N    T+LS DPLQQP+      DQ+HNR G E G+SS 
Sbjct: 77  GHPPPHAPPITAGQ-QPSKLSNLYSSTNLSVDPLQQPFFYRNGADQHHNRSGIEAGESSA 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V6G93.4e-1133.06Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v... [more]
A0A5D3DBU11.3e-1043.38Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29... [more]
A0A5D3BVA88.3e-1041.35TMV resistance protein N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5D3CAC01.2e-0836.76Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G0... [more]
A0A5A7TBP71.2e-0833.74Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G0... [more]
Match NameE-valueIdentityDescription
KAA0060550.16.9e-1136.04Integrase, catalytic core [Cucumis melo var. makuwa] >TYK00793.1 Integrase, cata... [more]
KAA0061289.16.9e-1133.06hypothetical protein E6C27_scaffold455G001330 [Cucumis melo var. makuwa] >TYK098... [more]
KAA0048797.12.6e-1043.38reverse transcriptase [Cucumis melo var. makuwa] >TYK20749.1 reverse transcripta... [more]
KAA0038337.11.0e-0945.08UBN2_3 domain-containing protein [Cucumis melo var. makuwa][more]
TYJ97057.11.0e-0945.08Beta-galactosidase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023479.1PI0023479.1mRNA