PI0023424 (gene) Melon (PI 482460) v1

Overview


Name	PI0023424
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	PMD domain-containing protein
Location	chr02: 8819948 .. 8820981 (-)
RNA-Seq Expression	PI0023424
Synteny	PI0023424

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCTTATCCTCGAAAGGAAGGTCAAGGAGCATAGAGAGGAGAGTGATAGAAGTAGAAGTGATCGCATTGGAAGAGACCTTCGAAGAAAGCAAAGGCATCAGGTGATGATTCCCGTGGAAGAGGCTCAAGTGCTATGGGAATTCCTAACGTTCCAACACCACTGGTTCGCATATTTTCTTCCCTTAATTTTTTTTATTTTTTTATCTTTTTCATGGATAATTTATTTATTACTTATTTTTGCAGTCACCTTTGGACGATTATCTTCAAAGACTTGTAGAGATATGTAATGATGACTCTCTAACAAGGCCTCATGTTGTGGATTCAGCCCTTGAAGAAGTTGGTACCTTAAAGACACTAGTTGCCAAACCAGCTGAACAATCCTTACGTCCTTCTGCTCTTCTCAAGAAGATTCGTCGAGACAAGATGAAAGTGAATGAAAAAGACATCAAAAATTCAAATCCTCCAGCCAAAGCCCCAAAGCGCCTTAGAGAAGGTCAAATACACACATGCGTCTCTCAATATTTTCGAGCCGCCTTTAGACACTTCTAGGAAGTAGATAGCAGGACATCCTGAGCCTTCTCGGTGGATTGGTGAAAAGGTAGTGTCAAATTTCTTTCAGAAAACGGCCCTATGCATGTGGGAGGACATTCAAGACAAGTTTATGCGCACTCCTTATGAATATATCCCAAGATTTAGACCAGAAATAGCAACGGTCCTTTTGAGAATTGCGAAGATCCATGCAGAAAACATGACTTCTCTTGAAGAATATTTGAATAGCTACCTTAACAGGGTAGACAACTTCAACGATGTACAATCTTCATATTTCACACAGTTGTTGTCGACAAATAAAACCCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGTTTTGACTTTGATTGACCAACTACGAGAAGAGCTACACAGTTATCTTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAGAGTACAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAAATGAGGCCATAG

mRNA sequence

ATGACTCTTATCCTCGAAAGGAAGGTCAAGGAGCATAGAGAGGAGAGTGATAGAAGTAGAAGTGATCGCATTGGAAGAGACCTTCGAAGAAAGCAAAGGCATCAGTCACCTTTGGACGATTATCTTCAAAGACTTGTAGAGATATGTAATGATGACTCTCTAACAAGGCCTCATGTTGTGGATTCAGCCCTTGAAGAAGTTGGTACCTTAAAGACACTAGTTGCCAAACCAGCTGAACAATCCTTACGTCCTTCTGCTCTTCTCAAGAAGATTCGTCGAGACAAGATGAAAGTGAATGAAAAAGACATCAAAAATTCAAATCCTCCAGCCAAAGCCCCAAAGCGCCTTAGAGAAGGACATCCTGAGCCTTCTCGGTGGATTGGTGAAAAGGTAGTGTCAAATTTCTTTCAGAAAACGGCCCTATGCATGTGGGAGGACATTCAAGACAAGTTTATGCGCACTCCTTATGAATATATCCCAAGATTTAGACCAGAAATAGCAACGGTCCTTTTGAGAATTGCGAAGATCCATGCAGAAAACATGACTTCTCTTGAAGAATATTTGAATAGCTACCTTAACAGGGTAGACAACTTCAACGATGTACAATCTTCATATTTCACACAGTTGTTGTCGACAAATAAAACCCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGTTTTGACTTTGATTGACCAACTACGAGAAGAGCTACACAGTTATCTTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAGAGTACAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAAATGAGGCCATAG

Coding sequence (CDS)

ATGACTCTTATCCTCGAAAGGAAGGTCAAGGAGCATAGAGAGGAGAGTGATAGAAGTAGAAGTGATCGCATTGGAAGAGACCTTCGAAGAAAGCAAAGGCATCAGTCACCTTTGGACGATTATCTTCAAAGACTTGTAGAGATATGTAATGATGACTCTCTAACAAGGCCTCATGTTGTGGATTCAGCCCTTGAAGAAGTTGGTACCTTAAAGACACTAGTTGCCAAACCAGCTGAACAATCCTTACGTCCTTCTGCTCTTCTCAAGAAGATTCGTCGAGACAAGATGAAAGTGAATGAAAAAGACATCAAAAATTCAAATCCTCCAGCCAAAGCCCCAAAGCGCCTTAGAGAAGGACATCCTGAGCCTTCTCGGTGGATTGGTGAAAAGGTAGTGTCAAATTTCTTTCAGAAAACGGCCCTATGCATGTGGGAGGACATTCAAGACAAGTTTATGCGCACTCCTTATGAATATATCCCAAGATTTAGACCAGAAATAGCAACGGTCCTTTTGAGAATTGCGAAGATCCATGCAGAAAACATGACTTCTCTTGAAGAATATTTGAATAGCTACCTTAACAGGGTAGACAACTTCAACGATGTACAATCTTCATATTTCACACAGTTGTTGTCGACAAATAAAACCCGTCAATTGGACGAGAAGACATCTGCCATCAAAGAAGTTTTGACTTTGATTGACCAACTACGAGAAGAGCTACACAGTTATCTTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAGAGTACAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAAATGAGGCCATAG

Protein sequence

MTLILERKVKEHREESDRSRSDRIGRDLRRKQRHQSPLDDYLQRLVEICNDDSLTRPHVVDSALEEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIKNSNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTPYEYIPRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKTRQLDEKTSAIKEVLTLIDQLREELHSYLWKRKNWRADFRVQILSLNNYPSYLVRKMRP

Homology

[Close]

BLAST of PI0023424 vs. ExPASy TrEMBL
Match: A0A5A7V4F4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004890 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 4.4e-70
Identity = 158/261 (60.54%), Postives = 187/261 (71.65%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSD-RIGRDLRRKQR-----HQSPLDDYLQRLVEICNDDSLTRPH 64
           LE +VKEH++ESD S+SD    R L+R+ +      +SPL+D+L+ L+E  +D+SLT PH
Sbjct: 526 LEEEVKEHKDESDSSKSDLHWKRPLKRRYQVIIPTEESPLNDHLEGLIEPDSDESLTGPH 585

Query: 65  VVDSALEEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIKN------------- 124
            VDS  EEVGT KT V KPAEQSLRPSALL++IRR KM V  KD+++             
Sbjct: 586 AVDSTFEEVGTSKTPVNKPAEQSLRPSALLEEIRRGKMTVGRKDLESPSSKEGVCLKASL 645

Query: 125 ----------SNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTP 184
                     S  P  A       +PEPS+W+GEKVVSNFFQKTALCMWEDIQDK MRTP
Sbjct: 646 QKVSSAHAPLSELPLGAFNNQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTP 705

Query: 185 YEYIPRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKT 237
           +EYIPR RPEIATVL  I KIHA+ +TSLEEYLNSYL RVDNFNDVQSS+ TQLLS +K 
Sbjct: 706 FEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSHSTQLLSMDKA 765

[Close]

BLAST of PI0023424 vs. ExPASy TrEMBL
Match: A0A5D3BRA8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00620 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 4.4e-70
Identity = 158/261 (60.54%), Postives = 187/261 (71.65%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSD-RIGRDLRRKQR-----HQSPLDDYLQRLVEICNDDSLTRPH 64
           LE +VKEH++ESD S+SD    R L+R+ +      +SPL+D+L+ L+E  +D+SLT PH
Sbjct: 526 LEEEVKEHKDESDSSKSDLHWKRPLKRRYQVIIPTEESPLNDHLEGLIEPDSDESLTGPH 585

Query: 65  VVDSALEEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIKN------------- 124
            VDS  EEVGT KT V KPAEQSLRPSALL++IRR KM V  KD+++             
Sbjct: 586 AVDSTFEEVGTSKTPVNKPAEQSLRPSALLEEIRRGKMTVGRKDLESPSSKEGVCLKASL 645

Query: 125 ----------SNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTP 184
                     S  P  A       +PEPS+W+GEKVVSNFFQKTALCMWEDIQDK MRTP
Sbjct: 646 QKVSSAHAPLSELPLGAFNNQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTP 705

Query: 185 YEYIPRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKT 237
           +EYIPR RPEIATVL  I KIHA+ +TSLEEYLNSYL RVDNFNDVQSS+ TQLLS +K 
Sbjct: 706 FEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSHSTQLLSMDKA 765

[Close]

BLAST of PI0023424 vs. ExPASy TrEMBL
Match: A0A5D3C3D7 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001360 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 156/260 (60.00%), Postives = 183/260 (70.38%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSDRIGRDLRRKQRHQSPLDDYLQRLVEICNDDSLTRPHVVDSAL 64
           LE +VKEH++ESD S+SDR  +   +K +      D+  RL+E  +D+SLT PHVVDSA 
Sbjct: 630 LEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPHVVDSAF 689

Query: 65  EEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIKNSN------PPAKAPKRLRE 124
           EEVGT KT V KPAEQSLRPSAL ++IRR KM V  KD+++ +      P A  PK    
Sbjct: 690 EEVGTSKTPVNKPAEQSLRPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKASLPKVSST 749

Query: 125 GHP-------------------EPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTPYEYI 184
             P                   EPS+W+GEKVVSNFFQKTALCMWEDIQDK MRTP+EYI
Sbjct: 750 HAPLKFSELPLGTSNKQTMRNSEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYI 809

Query: 185 PRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKTRQLD 240
           PR RPEIATVL  I KIHA+ +TSLEEYLNSYL RVDNFNDVQSSY  QLLST+K RQL+
Sbjct: 810 PRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKARQLN 869

[Close]

BLAST of PI0023424 vs. ExPASy TrEMBL
Match: A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.8e-69
Identity = 154/255 (60.39%), Postives = 182/255 (71.37%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSDRIGRDLRRKQRHQ--------------------SPLDDYLQR 64
           LE +VKEH++ES+ S+SDR  +   +K +                      SPL+D+L+ 
Sbjct: 609 LEEEVKEHKDESNNSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLSPLNDHLEG 668

Query: 65  LVEICNDDSLTRPHVVDSALEEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIK 124
           L+E  +D SLT PH VDSA EEVGT KTLV KPAEQSL PSALL++IRR KM V EK ++
Sbjct: 669 LIEPDSDKSLTGPHAVDSAFEEVGTSKTLVNKPAEQSLHPSALLEEIRRGKMTVGEKTLR 728

Query: 125 NSNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTPYEYIPRFRP 184
             +P   A        PEPS+W+GEKVVSNFFQKTALCMWEDIQDK MRTP+EYIPR RP
Sbjct: 729 ALHPKKTARS------PEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRP 788

Query: 185 EIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKTRQLDEKTSA 240
           EIATV   I KIHA+ +TSLEEYLNSYL RVDNFNDVQSSY  QLLST+K  QL+EKTSA
Sbjct: 789 EIATVFSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKAHQLNEKTSA 848

[Close]

BLAST of PI0023424 vs. ExPASy TrEMBL
Match: E5GCB9 (PMD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 4.1e-68
Identity = 154/260 (59.23%), Postives = 181/260 (69.62%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSDRIGRDLRRKQRHQSPLDDYLQRLVEICNDDSLTRPHVVDSAL 64
           LE +VKEH++ESD S+SDR  +   +K +      D+  RL+E  +D+SLT PHVVDSA 
Sbjct: 348 LEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPHVVDSAF 407

Query: 65  EEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKD---------------------- 124
           EEVGT KT V KPAEQSL PSAL ++IRR KM V  KD                      
Sbjct: 408 EEVGTSKTPVNKPAEQSLCPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKAFLPKVSST 467

Query: 125 ---IKNSNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTPYEYI 184
              +K S  P  A  +    +PEPS+W+GEKVVSNFFQKTALCMWEDIQDK M+TP+E I
Sbjct: 468 HAPLKFSELPLGASNKQTMRNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMQTPFECI 527

Query: 185 PRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKTRQLD 240
           PR RPEIATVL  I KIHA+ +TSLEEYLNSYL RVDNFNDVQSSY  QLLST+K RQL+
Sbjct: 528 PRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKARQLN 587

[Close]

BLAST of PI0023424 vs. NCBI nr
Match: TYK02261.1 (hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 9.0e-70
Identity = 158/261 (60.54%), Postives = 187/261 (71.65%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSD-RIGRDLRRKQR-----HQSPLDDYLQRLVEICNDDSLTRPH 64
           LE +VKEH++ESD S+SD    R L+R+ +      +SPL+D+L+ L+E  +D+SLT PH
Sbjct: 526 LEEEVKEHKDESDSSKSDLHWKRPLKRRYQVIIPTEESPLNDHLEGLIEPDSDESLTGPH 585

Query: 65  VVDSALEEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIKN------------- 124
            VDS  EEVGT KT V KPAEQSLRPSALL++IRR KM V  KD+++             
Sbjct: 586 AVDSTFEEVGTSKTPVNKPAEQSLRPSALLEEIRRGKMTVGRKDLESPSSKEGVCLKASL 645

Query: 125 ----------SNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTP 184
                     S  P  A       +PEPS+W+GEKVVSNFFQKTALCMWEDIQDK MRTP
Sbjct: 646 QKVSSAHAPLSELPLGAFNNQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTP 705

Query: 185 YEYIPRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKT 237
           +EYIPR RPEIATVL  I KIHA+ +TSLEEYLNSYL RVDNFNDVQSS+ TQLLS +K 
Sbjct: 706 FEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSHSTQLLSMDKA 765

[Close]

BLAST of PI0023424 vs. NCBI nr
Match: KAA0060611.1 (hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 9.0e-70
Identity = 158/261 (60.54%), Postives = 187/261 (71.65%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSD-RIGRDLRRKQR-----HQSPLDDYLQRLVEICNDDSLTRPH 64
           LE +VKEH++ESD S+SD    R L+R+ +      +SPL+D+L+ L+E  +D+SLT PH
Sbjct: 526 LEEEVKEHKDESDSSKSDLHWKRPLKRRYQVIIPTEESPLNDHLEGLIEPDSDESLTGPH 585

Query: 65  VVDSALEEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIKN------------- 124
            VDS  EEVGT KT V KPAEQSLRPSALL++IRR KM V  KD+++             
Sbjct: 586 AVDSTFEEVGTSKTPVNKPAEQSLRPSALLEEIRRGKMTVGRKDLESPSSKEGVCLKASL 645

Query: 125 ----------SNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTP 184
                     S  P  A       +PEPS+W+GEKVVSNFFQKTALCMWEDIQDK MRTP
Sbjct: 646 QKVSSAHAPLSELPLGAFNNQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTP 705

Query: 185 YEYIPRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKT 237
           +EYIPR RPEIATVL  I KIHA+ +TSLEEYLNSYL RVDNFNDVQSS+ TQLLS +K 
Sbjct: 706 FEYIPRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSHSTQLLSMDKA 765

[Close]

BLAST of PI0023424 vs. NCBI nr
Match: TYK06433.1 (hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 3.4e-69
Identity = 156/260 (60.00%), Postives = 183/260 (70.38%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSDRIGRDLRRKQRHQSPLDDYLQRLVEICNDDSLTRPHVVDSAL 64
           LE +VKEH++ESD S+SDR  +   +K +      D+  RL+E  +D+SLT PHVVDSA 
Sbjct: 630 LEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPHVVDSAF 689

Query: 65  EEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIKNSN------PPAKAPKRLRE 124
           EEVGT KT V KPAEQSLRPSAL ++IRR KM V  KD+++ +      P A  PK    
Sbjct: 690 EEVGTSKTPVNKPAEQSLRPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKASLPKVSST 749

Query: 125 GHP-------------------EPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTPYEYI 184
             P                   EPS+W+GEKVVSNFFQKTALCMWEDIQDK MRTP+EYI
Sbjct: 750 HAPLKFSELPLGTSNKQTMRNSEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYI 809

Query: 185 PRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKTRQLD 240
           PR RPEIATVL  I KIHA+ +TSLEEYLNSYL RVDNFNDVQSSY  QLLST+K RQL+
Sbjct: 810 PRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKARQLN 869

[Close]

BLAST of PI0023424 vs. NCBI nr
Match: KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa])

HSP 1 Score: 271.9 bits (694), Expect = 5.8e-69
Identity = 154/255 (60.39%), Postives = 182/255 (71.37%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSDRIGRDLRRKQRHQ--------------------SPLDDYLQR 64
           LE +VKEH++ES+ S+SDR  +   +K +                      SPL+D+L+ 
Sbjct: 609 LEEEVKEHKDESNNSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLSPLNDHLEG 668

Query: 65  LVEICNDDSLTRPHVVDSALEEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKDIK 124
           L+E  +D SLT PH VDSA EEVGT KTLV KPAEQSL PSALL++IRR KM V EK ++
Sbjct: 669 LIEPDSDKSLTGPHAVDSAFEEVGTSKTLVNKPAEQSLHPSALLEEIRRGKMTVGEKTLR 728

Query: 125 NSNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTPYEYIPRFRP 184
             +P   A        PEPS+W+GEKVVSNFFQKTALCMWEDIQDK MRTP+EYIPR RP
Sbjct: 729 ALHPKKTARS------PEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRP 788

Query: 185 EIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKTRQLDEKTSA 240
           EIATV   I KIHA+ +TSLEEYLNSYL RVDNFNDVQSSY  QLLST+K  QL+EKTSA
Sbjct: 789 EIATVFSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKAHQLNEKTSA 848

[Close]

BLAST of PI0023424 vs. NCBI nr
Match: ADN34118.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 268.1 bits (684), Expect = 8.4e-68
Identity = 154/260 (59.23%), Postives = 181/260 (69.62%), Query Frame = 0


Query: 5   LERKVKEHREESDRSRSDRIGRDLRRKQRHQSPLDDYLQRLVEICNDDSLTRPHVVDSAL 64
           LE +VKEH++ESD S+SDR  +   +K +      D+  RL+E  +D+SLT PHVVDSA 
Sbjct: 348 LEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPDWFARLIEPDSDESLTGPHVVDSAF 407

Query: 65  EEVGTLKTLVAKPAEQSLRPSALLKKIRRDKMKVNEKD---------------------- 124
           EEVGT KT V KPAEQSL PSAL ++IRR KM V  KD                      
Sbjct: 408 EEVGTSKTPVNKPAEQSLCPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKAFLPKVSST 467

Query: 125 ---IKNSNPPAKAPKRLREGHPEPSRWIGEKVVSNFFQKTALCMWEDIQDKFMRTPYEYI 184
              +K S  P  A  +    +PEPS+W+GEKVVSNFFQKTALCMWEDIQDK M+TP+E I
Sbjct: 468 HAPLKFSELPLGASNKQTMRNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMQTPFECI 527

Query: 185 PRFRPEIATVLLRIAKIHAENMTSLEEYLNSYLNRVDNFNDVQSSYFTQLLSTNKTRQLD 240
           PR RPEIATVL  I KIHA+ +TSLEEYLNSYL RVDNFNDVQSSY  QLLST+K RQL+
Sbjct: 528 PRLRPEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKARQLN 587

The following BLAST results are available for this feature:

BLAST of PI0023424 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023424 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4F4	4.4e-70	60.54	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3BRA8	4.4e-70	60.54	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5D3C3D7	1.7e-69	60.00	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7U8L3	2.8e-69	60.39	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
E5GCB9	4.1e-68	59.23	PMD domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of PI0023424 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02261.1	9.0e-70	60.54	hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]	[more]
KAA0060611.1	9.0e-70	60.54	hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]	[more]
TYK06433.1	3.4e-69	60.00	hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]	[more]
KAA0050516.1	5.8e-69	60.39	hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]	[more]
ADN34118.1	8.4e-68	59.23	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of PI0023424 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 218..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023424.1	PI0023424.1	mRNA