PI0023416 (gene) Melon (PI 482460) v1

Overview


Name	PI0023416
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr06: 8514722 .. 8515677 (-)
RNA-Seq Expression	PI0023416
Synteny	PI0023416

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCAAAGATACTCACGGTATATAAGGGACAAGGAAAAGAGGAGGTGAATGACAGTAAAATATGTGCATCAACGGATGAGGTTTCCTTTTTACCAAGGCCTTTAACGGTTTTCTATCAAGAAAATCGTAATGAGTCAACTTTCTACAATCCTAAAACACTCACGATCCAAGTACCTAGTCCTTTCAAATTTAAGGATTTAAAAGCAGTGCCTTGGAGGTATGATTGTCAAGTTATATCAGGTCATTCAATTGATAATATTACAGGAATCAGTGGGATAACTCGAAGTGGAAGATGTTACAAACCAGATGATTTGACAGAACCTTCAGATGGTGTGATACTGGGGCAAAGGAGGAAAAATGAAAAAAGAATTGTGAATGAACATTGCAAAGAGCAGGATGTGGAGATGCCCATCATAGCTAAGGATGTAGAATACAAAAAGCCTGTTACCGATGAGGAAGCAAACGAATTCTTGAAATTAGTAAAACAAAGTGAATATAAGATATAGAGCAAATGCATCATACTCCAGCTCGAATTTCTTTATTATCTTTGTTCTTGAATTCAGAGCCTCATCGCAAAGTGCTATTAGATATTTTGAACAAGGCACATGTTGGACATGACATTTCGGTAGAAAAATTCAATGGAATTATTGGAAACATTACATCTTCAAATTCCATAGTCTTTACGGATGATGAAATTCCTCCTGAAGGTTTGGGCCATACAAAAGCACTGCATATTCAAGTAAAGTGCAGAGACTACGTCGTAGCAAGAGTTTTAGTGGATAATGGATCAGCTCTTAATATAATGCCTAAATCTACACTATTGAAACTTCCAGTGGACATGTCACACATAAAATCAAGCACTATGGTTGTAAGAGCTTTTGATGGGTCACGTAGAGAAGTCATGGGTGACATTGAGTTACCAATCAAATTGGCCCATGTACTTTCAATATAG

mRNA sequence

ATGGATGCAAAGATACTCACGGTATATAAGGGACAAGGAAAAGAGGAGGTGAATGACAGTAAAATATGTGCATCAACGGATGAGGTTTCCTTTTTACCAAGGCCTTTAACGGTTTTCTATCAAGAAAATCGTAATGAGTCAACTTTCTACAATCCTAAAACACTCACGATCCAAGTACCTAGTCCTTTCAAATTTAAGGATTTAAAAGCAGTGCCTTGGAGGTATGATTGTCAAGTTATATCAGGTCATTCAATTGATAATATTACAGGAATCAGTGGGATAACTCGAAGTGGAAGATGTTACAAACCAGATGATTTGACAGAACCTTCAGATGGTGTGATACTGGGGCAAAGGAGGAAAAATGAAAAAAGAATTGTGAATGAACATTGCAAAGAGCAGGATGTGGAGATGCCCATCATAGCTAAGGATGTAGAATACAAAAAGCCTGTTACCGATGAGGAAGCAAACGAATTCTTGAAATTACAAATGCATCATACTCCAGCTCGAATTTCTTTATTATCTTTGTTCTTGAATTCAGAGCCTCATCGCAAAGTGCTATTAGATATTTTGAACAAGGCACATGTTGGACATGACATTTCGGTAGAAAAATTCAATGGAATTATTGGAAACATTACATCTTCAAATTCCATAGTCTTTACGGATGATGAAATTCCTCCTGAAGGTTTGGGCCATACAAAAGCACTGCATATTCAAGTAAAGTGCAGAGACTACGTCGTAGCAAGAGTTTTAGTGGATAATGGATCAGCTCTTAATATAATGCCTAAATCTACACTATTGAAACTTCCAGTGGACATGTCACACATAAAATCAAGCACTATGGTTGTAAGAGCTTTTGATGGGTCACGTAGAGAAGTCATGGGTGACATTGAGTTACCAATCAAATTGGCCCATGTACTTTCAATATAG

Coding sequence (CDS)

ATGGATGCAAAGATACTCACGGTATATAAGGGACAAGGAAAAGAGGAGGTGAATGACAGTAAAATATGTGCATCAACGGATGAGGTTTCCTTTTTACCAAGGCCTTTAACGGTTTTCTATCAAGAAAATCGTAATGAGTCAACTTTCTACAATCCTAAAACACTCACGATCCAAGTACCTAGTCCTTTCAAATTTAAGGATTTAAAAGCAGTGCCTTGGAGGTATGATTGTCAAGTTATATCAGGTCATTCAATTGATAATATTACAGGAATCAGTGGGATAACTCGAAGTGGAAGATGTTACAAACCAGATGATTTGACAGAACCTTCAGATGGTGTGATACTGGGGCAAAGGAGGAAAAATGAAAAAAGAATTGTGAATGAACATTGCAAAGAGCAGGATGTGGAGATGCCCATCATAGCTAAGGATGTAGAATACAAAAAGCCTGTTACCGATGAGGAAGCAAACGAATTCTTGAAATTACAAATGCATCATACTCCAGCTCGAATTTCTTTATTATCTTTGTTCTTGAATTCAGAGCCTCATCGCAAAGTGCTATTAGATATTTTGAACAAGGCACATGTTGGACATGACATTTCGGTAGAAAAATTCAATGGAATTATTGGAAACATTACATCTTCAAATTCCATAGTCTTTACGGATGATGAAATTCCTCCTGAAGGTTTGGGCCATACAAAAGCACTGCATATTCAAGTAAAGTGCAGAGACTACGTCGTAGCAAGAGTTTTAGTGGATAATGGATCAGCTCTTAATATAATGCCTAAATCTACACTATTGAAACTTCCAGTGGACATGTCACACATAAAATCAAGCACTATGGTTGTAAGAGCTTTTGATGGGTCACGTAGAGAAGTCATGGGTGACATTGAGTTACCAATCAAATTGGCCCATGTACTTTCAATATAG

Protein sequence

MDAKILTVYKGQGKEEVNDSKICASTDEVSFLPRPLTVFYQENRNESTFYNPKTLTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKLQMHHTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEIPPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRAFDGSRREVMGDIELPIKLAHVLSI

Homology

[Close]

BLAST of PI0023416 vs. ExPASy TrEMBL
Match: A0A5D3DEB3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00440 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.0e-147
Identity = 269/318 (84.59%), Postives = 287/318 (90.25%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F NPK 
Sbjct: 525 MDSKILTVYRGQGKDEMKDSKICALMDEVSEKKDSFLPRPLTVFYQESHNESTSFCNPKK 584

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           LTIQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGITRSGRCYKPD+LT P DG+I
Sbjct: 585 LTIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPLDGLI 644

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEK  V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+          QMH
Sbjct: 645 LEQGRKNEKTNVKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFLKIVKQSEYKIIEQMH 704

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKF+GIIGNITSSNSIVFTDDEI
Sbjct: 705 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEI 764

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+A
Sbjct: 765 PPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKA 824

Query: 301 FDGSRREVMGDIELPIKL 303
           FDGSRREVMGDIELP+K+
Sbjct: 825 FDGSRREVMGDIELPVKI 842

[Close]

BLAST of PI0023416 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.2e-146
Identity = 266/318 (83.65%), Postives = 285/318 (89.62%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTVFYQE+ NEST F NPK 
Sbjct: 317 MDSKILTVYRGQEKDEMKDSKMCALMDEVSEKKDSFLPRPLTVFYQESHNESTSFCNPKK 376

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           LTIQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGITRSGRCYKPD+LT PSDG+I
Sbjct: 377 LTIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPSDGLI 436

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEKR V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+          QMH
Sbjct: 437 LEQGRKNEKRNVKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFLKIVKQSEYKIIEQMH 496

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKF+GIIGNIT  NSIVFTDDEI
Sbjct: 497 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFSGIIGNITPPNSIVFTDDEI 556

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+ 
Sbjct: 557 PPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKV 616

Query: 301 FDGSRREVMGDIELPIKL 303
           FDGSRREVMGDIELP+K+
Sbjct: 617 FDGSRREVMGDIELPVKI 634

[Close]

BLAST of PI0023416 vs. ExPASy TrEMBL
Match: A0A5A7T0R1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00300 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.8e-144
Identity = 262/318 (82.39%), Postives = 285/318 (89.62%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQGK+E+ DSKIC   DEV     SFLPRPLTVFYQE+ NEST F NPK 
Sbjct: 531 MDSKILTVYRGQGKDEMKDSKICVLMDEVSENKDSFLPRPLTVFYQESHNESTSFCNPKK 590

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           LTIQVPSPFKFKDLKA+PWRYDCQVI+G  +DNITGISGITRSGRCYKPD+LT PS+G+I
Sbjct: 591 LTIQVPSPFKFKDLKAMPWRYDCQVITGPLVDNITGISGITRSGRCYKPDNLTVPSNGLI 650

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEKR   EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+          QMH
Sbjct: 651 LEQGRKNEKRNAKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFLKIVKQSEYKIIEQMH 710

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           +TPARISLLSLFLNSEPHRK+LLDILNKAHVGHDISVEKF+GIIGNITSSNSIVFTDDEI
Sbjct: 711 YTPARISLLSLFLNSEPHRKLLLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEI 770

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQ+KC+DYV+ARVLVDNGSALNIMPKSTLL LPVDMSHIKSSTMVV+A
Sbjct: 771 PPEGLGHTKALHIQLKCKDYVIARVLVDNGSALNIMPKSTLLMLPVDMSHIKSSTMVVKA 830

Query: 301 FDGSRREVMGDIELPIKL 303
           FDGSRREVMGDIELP+K+
Sbjct: 831 FDGSRREVMGDIELPVKI 848

[Close]

BLAST of PI0023416 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.2e-144
Identity = 263/318 (82.70%), Postives = 284/318 (89.31%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTVFYQE+ N ST F NPK 
Sbjct: 171 MDSKILTVYRGQEKDEMKDSKMCALMDEVSEKKDSFLPRPLTVFYQESHNGSTSFCNPKK 230

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           L IQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGITRSGRCYKPD+LT PSDG+I
Sbjct: 231 LPIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPSDGLI 290

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEKR V EHCK+QDVEMPIIAKD+EYK  VTDEEANEFLK+          QMH
Sbjct: 291 LEQGRKNEKRNVKEHCKDQDVEMPIIAKDIEYKNLVTDEEANEFLKIVKQSEYKIIEQMH 350

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISV+KF+GIIGNITSSNSIVFTDD+I
Sbjct: 351 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVKKFSGIIGNITSSNSIVFTDDKI 410

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+A
Sbjct: 411 PPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKA 470

Query: 301 FDGSRREVMGDIELPIKL 303
           FDGSRREVM DIELP+K+
Sbjct: 471 FDGSRREVMDDIELPVKI 488

[Close]

BLAST of PI0023416 vs. ExPASy TrEMBL
Match: A0A5A7VIM6 (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001370 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.4e-143
Identity = 262/318 (82.39%), Postives = 283/318 (88.99%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F N K 
Sbjct: 498 MDSKILTVYRGQGKDEMKDSKICALMDEVSEKKDSFLPRPLTVFYQESHNESTSFCNLKK 557

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           LTIQVPSPFKFKDLKAVPW YDCQVI+G S+DNITGISGITRSGRCYKPD+LT P DG+I
Sbjct: 558 LTIQVPSPFKFKDLKAVPWWYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPLDGLI 617

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEK  V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+          QMH
Sbjct: 618 LEQGRKNEKTNVKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFLKIVKQSEYKIIEQMH 677

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDIS+EKF+GIIGNITSSN IVFTDD+I
Sbjct: 678 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISMEKFSGIIGNITSSNFIVFTDDKI 737

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+ 
Sbjct: 738 PPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKD 797

Query: 301 FDGSRREVMGDIELPIKL 303
           F+GSRREVMGDIELP+K+
Sbjct: 798 FNGSRREVMGDIELPVKI 815

[Close]

BLAST of PI0023416 vs. NCBI nr
Match: TYK21788.1 (uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 532.7 bits (1371), Expect = 2.1e-147
Identity = 269/318 (84.59%), Postives = 287/318 (90.25%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F NPK 
Sbjct: 525 MDSKILTVYRGQGKDEMKDSKICALMDEVSEKKDSFLPRPLTVFYQESHNESTSFCNPKK 584

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           LTIQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGITRSGRCYKPD+LT P DG+I
Sbjct: 585 LTIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPLDGLI 644

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEK  V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+          QMH
Sbjct: 645 LEQGRKNEKTNVKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFLKIVKQSEYKIIEQMH 704

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKF+GIIGNITSSNSIVFTDDEI
Sbjct: 705 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEI 764

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+A
Sbjct: 765 PPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKA 824

Query: 301 FDGSRREVMGDIELPIKL 303
           FDGSRREVMGDIELP+K+
Sbjct: 825 FDGSRREVMGDIELPVKI 842

[Close]

BLAST of PI0023416 vs. NCBI nr
Match: KAA0037621.1 (uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa])

HSP 1 Score: 527.7 bits (1358), Expect = 6.7e-146
Identity = 266/318 (83.65%), Postives = 285/318 (89.62%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTVFYQE+ NEST F NPK 
Sbjct: 317 MDSKILTVYRGQEKDEMKDSKMCALMDEVSEKKDSFLPRPLTVFYQESHNESTSFCNPKK 376

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           LTIQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGITRSGRCYKPD+LT PSDG+I
Sbjct: 377 LTIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPSDGLI 436

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEKR V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+          QMH
Sbjct: 437 LEQGRKNEKRNVKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFLKIVKQSEYKIIEQMH 496

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKF+GIIGNIT  NSIVFTDDEI
Sbjct: 497 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFSGIIGNITPPNSIVFTDDEI 556

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+ 
Sbjct: 557 PPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKV 616

Query: 301 FDGSRREVMGDIELPIKL 303
           FDGSRREVMGDIELP+K+
Sbjct: 617 FDGSRREVMGDIELPVKI 634

[Close]

BLAST of PI0023416 vs. NCBI nr
Match: KAA0036950.1 (uncharacterized protein E6C27_scaffold86G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 521.9 bits (1343), Expect = 3.7e-144
Identity = 262/318 (82.39%), Postives = 285/318 (89.62%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQGK+E+ DSKIC   DEV     SFLPRPLTVFYQE+ NEST F NPK 
Sbjct: 531 MDSKILTVYRGQGKDEMKDSKICVLMDEVSENKDSFLPRPLTVFYQESHNESTSFCNPKK 590

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           LTIQVPSPFKFKDLKA+PWRYDCQVI+G  +DNITGISGITRSGRCYKPD+LT PS+G+I
Sbjct: 591 LTIQVPSPFKFKDLKAMPWRYDCQVITGPLVDNITGISGITRSGRCYKPDNLTVPSNGLI 650

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEKR   EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+          QMH
Sbjct: 651 LEQGRKNEKRNAKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFLKIVKQSEYKIIEQMH 710

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           +TPARISLLSLFLNSEPHRK+LLDILNKAHVGHDISVEKF+GIIGNITSSNSIVFTDDEI
Sbjct: 711 YTPARISLLSLFLNSEPHRKLLLDILNKAHVGHDISVEKFSGIIGNITSSNSIVFTDDEI 770

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQ+KC+DYV+ARVLVDNGSALNIMPKSTLL LPVDMSHIKSSTMVV+A
Sbjct: 771 PPEGLGHTKALHIQLKCKDYVIARVLVDNGSALNIMPKSTLLMLPVDMSHIKSSTMVVKA 830

Query: 301 FDGSRREVMGDIELPIKL 303
           FDGSRREVMGDIELP+K+
Sbjct: 831 FDGSRREVMGDIELPVKI 848

[Close]

BLAST of PI0023416 vs. NCBI nr
Match: KAA0046213.1 (uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 520.4 bits (1339), Expect = 1.1e-143
Identity = 263/318 (82.70%), Postives = 284/318 (89.31%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTVFYQE+ N ST F NPK 
Sbjct: 171 MDSKILTVYRGQEKDEMKDSKMCALMDEVSEKKDSFLPRPLTVFYQESHNGSTSFCNPKK 230

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           L IQVPSPFKFKDLKAVPWRYDCQVI+G S+DNITGISGITRSGRCYKPD+LT PSDG+I
Sbjct: 231 LPIQVPSPFKFKDLKAVPWRYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPSDGLI 290

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEKR V EHCK+QDVEMPIIAKD+EYK  VTDEEANEFLK+          QMH
Sbjct: 291 LEQGRKNEKRNVKEHCKDQDVEMPIIAKDIEYKNLVTDEEANEFLKIVKQSEYKIIEQMH 350

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISV+KF+GIIGNITSSNSIVFTDD+I
Sbjct: 351 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVKKFSGIIGNITSSNSIVFTDDKI 410

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+A
Sbjct: 411 PPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKA 470

Query: 301 FDGSRREVMGDIELPIKL 303
           FDGSRREVM DIELP+K+
Sbjct: 471 FDGSRREVMDDIELPVKI 488

[Close]

BLAST of PI0023416 vs. NCBI nr
Match: KAA0067953.1 (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 516.5 bits (1329), Expect = 1.5e-142
Identity = 262/318 (82.39%), Postives = 283/318 (88.99%), Query Frame = 0


Query: 1   MDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKT 60
           MD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F N K 
Sbjct: 498 MDSKILTVYRGQGKDEMKDSKICALMDEVSEKKDSFLPRPLTVFYQESHNESTSFCNLKK 557

Query: 61  LTIQVPSPFKFKDLKAVPWRYDCQVISGHSIDNITGISGITRSGRCYKPDDLTEPSDGVI 120
           LTIQVPSPFKFKDLKAVPW YDCQVI+G S+DNITGISGITRSGRCYKPD+LT P DG+I
Sbjct: 558 LTIQVPSPFKFKDLKAVPWWYDCQVITGPSVDNITGISGITRSGRCYKPDNLTVPLDGLI 617

Query: 121 LGQRRKNEKRIVNEHCKEQDVEMPIIAKDVEYKKPVTDEEANEFLKL----------QMH 180
           L Q RKNEK  V EHCK+QDVEMPIIAKD+EYKK VTDEEANEFLK+          QMH
Sbjct: 618 LEQGRKNEKTNVKEHCKDQDVEMPIIAKDIEYKKLVTDEEANEFLKIVKQSEYKIIEQMH 677

Query: 181 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISVEKFNGIIGNITSSNSIVFTDDEI 240
           HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDIS+EKF+GIIGNITSSN IVFTDD+I
Sbjct: 678 HTPARISLLSLFLNSEPHRKVLLDILNKAHVGHDISMEKFSGIIGNITSSNFIVFTDDKI 737

Query: 241 PPEGLGHTKALHIQVKCRDYVVARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVRA 300
           PPEGLGHTKALHIQVKC+DYV+ARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVV+ 
Sbjct: 738 PPEGLGHTKALHIQVKCKDYVIARVLVDNGSALNIMPKSTLLKLPVDMSHIKSSTMVVKD 797

Query: 301 FDGSRREVMGDIELPIKL 303
           F+GSRREVMGDIELP+K+
Sbjct: 798 FNGSRREVMGDIELPVKI 815

The following BLAST results are available for this feature:

BLAST of PI0023416 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023416 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DEB3	1.0e-147	84.59	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T7R4	3.2e-146	83.65	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00282...	[more]
A0A5A7T0R1	1.8e-144	82.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TRL7	5.2e-144	82.70	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010...	[more]
A0A5A7VIM6	7.4e-143	82.39	RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein...	[more]

BLAST of PI0023416 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK21788.1	2.1e-147	84.59	uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]	[more]
KAA0037621.1	6.7e-146	83.65	uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]	[more]
KAA0036950.1	3.7e-144	82.39	uncharacterized protein E6C27_scaffold86G00300 [Cucumis melo var. makuwa]	[more]
KAA0046213.1	1.1e-143	82.70	uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]	[more]
KAA0067953.1	1.5e-142	82.39	RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein...	[more]

BLAST of PI0023416 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33240	OS08G0508500 PROTEIN	coord: 1..301
None	No IPR available	PANTHER	PTHR33240:SF7	GAG-PRO-LIKE PROTEIN	coord: 1..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023416.1	PI0023416.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity