
PI0023397 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTGAGACTTAAAGAACAAGGCCATAGAGTTCTCGTATACACACAGTTTCAACACATGTTGGACTTGCTGGAAGATTATTGCAGTTGCAAGGTATGGTACATCTTTAATCAAGATTACAAACGTTATCTTAAAAAAGCAGTAGTTGTTCTTATTGAAGGAGAAGATGGAAACTGCTATGCTTTCAAGTTGAAGTCTGATTCTTTTGATTATTTTTCTGGGTCAGAAATGGCAGTATGAAAGGATTGATGGCAAGGTTTGTGGAGCTGAAAGACAAATTCGAATAGATCGGTTTAATGCCAAGAATTCCTCTAGATTTTGTTTTCTGCTTTCTACCAGAGCTGGTGGTCTGGGAATAAATTTTGCGACTGCTGACACAGTTATCATATATGACAGGTGTGATAGTAATCTCATTTTATAATTTACCGTTCATGGTTATCTATTCTGGAAAATGTGTTTGCTATGATATTACTATAGAACTTCAATAGAATAATAGTTGTCTTCACTTCTCACCAAAGGTGAATGCTTAAGAAGTGAGATGCTTGGCTGCAACCCTAAACAGTAATCAGTGTTACGCTATCAGTAGCTTGGATTCAATAATTCTAGATCTGTGCTTCTTGATAGATGACGATTTCAAGCTAATTATAAGGATGAATTTCATGAGAATTTGTTTGATGATTACTGAACGGTGAAAACTTGTTATTATTTTAATCCTTTTTTTGGGTGTTATCATGCTGTACTATTGTTAGACTGATTTATTGTCATTGTGTTATAATGCCGTTCAGATCACAGTATTTATTTGCAATTTATGGAGCAAGCATGCCATAACTTAAATTGGGGAAGGAGAAGCATGGAGTTAAAGTGCCTTTTTAAATTGGCAATATTTGGTTAAAATTTTAGACAAGTAAAAAGTGTGTTAAAATTTTTTTTTTGATAATCAAAAGTAATTTTGAAAAATTCTTAAAGTAGATAAAAGAAGAGTTATAAAGTGCTTTTAGAGGAACTGTTTCACTAATTATCTTGCGCAAGTGGTTATATACTTAGTGTTTCACTTAAAACACTTTTTTTAGCTTACCGAAACAAACAGTTATAACAATCTGAGGACAACCCACTGTTAAAACTTGAAAATTCCATGAGATTTACTTTTACATACCAAGAGCTTATAACGTCTGCTTCATTTTTGTGTTTTCTCGGGCAACATATGTTCGTTCTCATTTTGTGAGTGATGCAGACATAATTTATGTGCTGCAGGTGGCAAATTTTGAATATATTGATGAGGTGGAGGCTGAAGAAGGCAGCAAAAAGGGCATCCATGGAAAGTAAGCCTGTTGCAAGCAACGTGGAAAGAGCTACCTATTGGGAAGAGTTGTTGAAGGATAAATATGAAGTGCATAAGATAGAAGAGTTTAACGCTTTGGGTAAAGGAAAGAGGAGCCGTAAGCAGGTCAGTTGGAATAGTGATAGTATTACATCATTGATATATGCAGTCATAATTGATACCATTCCTCTAAATAGTCCACGTTACTAAGTTGTAAAGCAACTATTTTCTCTCTCTCAAGTTTTCTTGTGGTTGTCTGTCAGTTGAAAGATGTTCGGTTTTCTTTTTTCTGCTTTGTTACAGCCACTTCATTAAAAAAAAAAAACTAACCATGAAAACCTAACGGACAAAGAGATGATGTTTCCCCTCCCCTAACCAAAAGGGATTACAAGATAACCTTTCAATCTAGACTGATTTATACAGTTGTGTAGTTGTCCAATTAGAGGCCAGGAACTGTACAAGGTCATAAAAGTAATCAAAAGAAACATATTTATCTGAACAAATTCTAGGTTTTATTTCCTTCCAAAGTAACCACAAAATAGCCATCGAAACATTACTCCATAGCACCTTTGCTTCATCGCTAAACCTCCTCCATTTAGAGAATCCATCATCCACTTCTTTGTAGACCGAGGCATGTACCAATTCAAACCAAACAGGCTATCTAAAGGATCCCAAACCCTTCTGGTAAATTGCACATATTCTGGGAAATGGAGATGATATCTCCTTTGGACCTTTTCACGAGTAAATATGCTTTGTGAGATGTGGTCAACAAAAAGAATTTCACCTTTTTGGTGTCTCCCAAATGGCTGAGTAACTCAATTTATTCTAGAGTCTTTTCTTCTATTGTAACTCCAAATAGGCTGACTTCACTGTAGATTTTCCACCTATTTCTATACTCCACGCCAATTGATCTTGGATATTAGACAGCTCCAAAATAGAAATAAGGATACCCATTCTTCCAACTTTCTGTTACTCCATTCTTCCAACTCTCTGTCACTTTAAGTCCCATCTTTGGCTATTGGGGTTCCACTACTGATGGATGGTGGACCTCAATCAAGGTTCACTAATTATTATTTTCTTGTGCAGTCTTAAAGATTTGGCAGTTGAGCTACATGTTTATTCTTCGTTATTTTTAATTCTATATCAAGGTCTCCCTATGGTTTTCTAAAAGTCTTTTCGCTTCAAATTTTGTTGACAAACTCTTTTAAAAATATTCTCTTCAACTTTCATCCTCTTTTGTTTTTACAAAAGAAAAACATTTCACAAAACTTTCAAACTCCACAAGCAAGGGTGTTGGCCATGCACATGGCGATTAGCATCAAGGCAACAGGCACATGGTGCGTGGAAGATGTTGCCTTGGTGCCATCCTTGTAG ATGATGGTGAGACTTAAAGAACAAGGCCATAGAGTTCTCGTATACACACAGTTTCAACACATGTTGGACTTGCTGGAAGATTATTGCAGTTGCAAGAAATGGCAGTATGAAAGGATTGATGGCAAGGTTTGTGGAGCTGAAAGACAAATTCGAATAGATCGGTTTAATGCCAAGAATTCCTCTAGATTTTGTTTTCTGCTTTCTACCAGAGCTGGTGGTCTGGGAATAAATTTTGCGACTGCTGACACAGTTATCATATATGACAGGTGGCAAATTTTGAATATATTGATGAGGTGGAGGCTGAAGAAGGCAGCAAAAAGGGCATCCATGGAAAGTAAGCCTGTTGCAAGCAACGTGGAAAGAGCTACCTATTGGGAAGAGTTGTTGAAGGATAAATATGAAGTGCATAAGATAGAAGAGTTTAACGCTTTGGGTAAAGGAAAGAGGAGCCGTAAGCAGCACCTTTGCTTCATCGCTAAACCTCCTCCATTTAGAGAATCCATCATCCACTTCTTTGTAGACCGAGGCATGTACCAATTCAAACCAAACAGGCTATCTAAAGGATCCCAAACCCTTCTGAAAAACATTTCACAAAACTTTCAAACTCCACAAGCAAGGGTGTTGGCCATGCACATGGCGATTAGCATCAAGGCAACAGGCACATGGTGCGTGGAAGATGTTGCCTTGGTGCCATCCTTGTAG ATGATGGTGAGACTTAAAGAACAAGGCCATAGAGTTCTCGTATACACACAGTTTCAACACATGTTGGACTTGCTGGAAGATTATTGCAGTTGCAAGAAATGGCAGTATGAAAGGATTGATGGCAAGGTTTGTGGAGCTGAAAGACAAATTCGAATAGATCGGTTTAATGCCAAGAATTCCTCTAGATTTTGTTTTCTGCTTTCTACCAGAGCTGGTGGTCTGGGAATAAATTTTGCGACTGCTGACACAGTTATCATATATGACAGGTGGCAAATTTTGAATATATTGATGAGGTGGAGGCTGAAGAAGGCAGCAAAAAGGGCATCCATGGAAAGTAAGCCTGTTGCAAGCAACGTGGAAAGAGCTACCTATTGGGAAGAGTTGTTGAAGGATAAATATGAAGTGCATAAGATAGAAGAGTTTAACGCTTTGGGTAAAGGAAAGAGGAGCCGTAAGCAGCACCTTTGCTTCATCGCTAAACCTCCTCCATTTAGAGAATCCATCATCCACTTCTTTGTAGACCGAGGCATGTACCAATTCAAACCAAACAGGCTATCTAAAGGATCCCAAACCCTTCTGAAAAACATTTCACAAAACTTTCAAACTCCACAAGCAAGGGTGTTGGCCATGCACATGGCGATTAGCATCAAGGCAACAGGCACATGGTGCGTGGAAGATGTTGCCTTGGTGCCATCCTTGTAG MMVRLKEQGHRVLVYTQFQHMLDLLEDYCSCKKWQYERIDGKVCGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINFATADTVIIYDRWQILNILMRWRLKKAAKRASMESKPVASNVERATYWEELLKDKYEVHKIEEFNALGKGKRSRKQHLCFIAKPPPFRESIIHFFVDRGMYQFKPNRLSKGSQTLLKNISQNFQTPQARVLAMHMAISIKATGTWCVEDVALVPSL Homology
BLAST of PI0023397 vs. ExPASy Swiss-Prot
Match: Q9S775 (CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana OX=3702 GN=PKL PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.4e-44 Identity = 117/281 (41.64%), Postives = 133/281 (47.33%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy Swiss-Prot
Match: F4JTF6 (CHD3-type chromatin-remodeling factor CHR7 OS=Arabidopsis thaliana OX=3702 GN=CHR7 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 9.9e-36 Identity = 71/88 (80.68%), Postives = 79/88 (89.77%), Query Frame = 0
HSP 2 Score: 50.1 bits (118), Expect = 4.0e-05 Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy Swiss-Prot
Match: Q12873 (Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens OX=9606 GN=CHD3 PE=1 SV=3) HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26 Identity = 58/88 (65.91%), Postives = 71/88 (80.68%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy Swiss-Prot
Match: Q8TDI0 (Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens OX=9606 GN=CHD5 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25 Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy Swiss-Prot
Match: A2A8L1 (Chromodomain-helicase-DNA-binding protein 5 OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25 Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy TrEMBL
Match: A0A5A7VBI4 (CHD3-type chromatin-remodeling factor PICKLE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001110 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53 Identity = 138/280 (49.29%), Postives = 144/280 (51.43%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy TrEMBL
Match: A0A1S4DZ79 (CHD3-type chromatin-remodeling factor PICKLE OS=Cucumis melo OX=3656 GN=LOC103493764 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53 Identity = 138/280 (49.29%), Postives = 144/280 (51.43%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy TrEMBL
Match: A0A0A0L332 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652080 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 7.1e-53 Identity = 137/280 (48.93%), Postives = 143/280 (51.07%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy TrEMBL
Match: A0A6J1IVQ1 (CHD3-type chromatin-remodeling factor PICKLE OS=Cucurbita maxima OX=3661 GN=LOC111480376 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51 Identity = 133/282 (47.16%), Postives = 142/282 (50.35%), Query Frame = 0
BLAST of PI0023397 vs. ExPASy TrEMBL
Match: A0A6J1FK38 (CHD3-type chromatin-remodeling factor PICKLE OS=Cucurbita moschata OX=3662 GN=LOC111446153 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 5.1e-51 Identity = 132/282 (46.81%), Postives = 142/282 (50.35%), Query Frame = 0
BLAST of PI0023397 vs. NCBI nr
Match: XP_016901296.1 (PREDICTED: CHD3-type chromatin-remodeling factor PICKLE [Cucumis melo]) HSP 1 Score: 219.9 bits (559), Expect = 2.2e-53 Identity = 138/280 (49.29%), Postives = 144/280 (51.43%), Query Frame = 0
BLAST of PI0023397 vs. NCBI nr
Match: KAA0064594.1 (CHD3-type chromatin-remodeling factor PICKLE [Cucumis melo var. makuwa] >TYK19995.1 CHD3-type chromatin-remodeling factor PICKLE [Cucumis melo var. makuwa]) HSP 1 Score: 219.9 bits (559), Expect = 2.2e-53 Identity = 138/280 (49.29%), Postives = 144/280 (51.43%), Query Frame = 0
BLAST of PI0023397 vs. NCBI nr
Match: XP_031739900.1 (CHD3-type chromatin-remodeling factor PICKLE [Cucumis sativus] >KGN55444.1 hypothetical protein Csa_012103 [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 1.5e-52 Identity = 137/280 (48.93%), Postives = 143/280 (51.07%), Query Frame = 0
BLAST of PI0023397 vs. NCBI nr
Match: XP_023524018.1 (CHD3-type chromatin-remodeling factor PICKLE [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.2 bits (539), Expect = 4.7e-51 Identity = 133/282 (47.16%), Postives = 142/282 (50.35%), Query Frame = 0
BLAST of PI0023397 vs. NCBI nr
Match: XP_022981141.1 (CHD3-type chromatin-remodeling factor PICKLE [Cucurbita maxima]) HSP 1 Score: 212.2 bits (539), Expect = 4.7e-51 Identity = 133/282 (47.16%), Postives = 142/282 (50.35%), Query Frame = 0
BLAST of PI0023397 vs. TAIR 10
Match: AT2G25170.1 (chromatin remodeling factor CHD3 (PICKLE) ) HSP 1 Score: 179.9 bits (455), Expect = 2.4e-45 Identity = 117/281 (41.64%), Postives = 133/281 (47.33%), Query Frame = 0
BLAST of PI0023397 vs. TAIR 10
Match: AT4G31900.1 (chromatin remodeling factor, putative ) HSP 1 Score: 151.8 bits (382), Expect = 7.0e-37 Identity = 71/88 (80.68%), Postives = 79/88 (89.77%), Query Frame = 0
HSP 2 Score: 50.1 bits (118), Expect = 2.9e-06 Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of PI0023397 vs. TAIR 10
Match: AT4G31900.2 (chromatin remodeling factor, putative ) HSP 1 Score: 151.8 bits (382), Expect = 7.0e-37 Identity = 71/88 (80.68%), Postives = 79/88 (89.77%), Query Frame = 0
HSP 2 Score: 50.1 bits (118), Expect = 2.9e-06 Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of PI0023397 vs. TAIR 10
Match: AT2G13370.1 (chromatin remodeling 5 ) HSP 1 Score: 103.2 bits (256), Expect = 2.9e-22 Identity = 58/131 (44.27%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of PI0023397 vs. TAIR 10
Match: AT5G18620.1 (chromatin remodeling factor17 ) HSP 1 Score: 96.7 bits (239), Expect = 2.7e-20 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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