PI0023387 (gene) Melon (PI 482460) v1

Overview


Name	PI0023387
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	LOB domain-containing protein
Location	chr11: 5986231 .. 5988219 (-)
RNA-Seq Expression	PI0023387
Synteny	PI0023387

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGTTTCTTTGCTCCGATCATCGGAAATGGAAGGAAGTGACACAATCACAATCACCACCGTTTCTTCAACTCCACTATCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCGCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATCTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCACTGAACCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCTTGCAGGTCTTTTTCATTCGCCTTTTAATTTCTCTCAATTCTTGATCTCTGTTTTACTTTAACTCTGAATTTCTAACTGTTCGGTTATTTTCAAGATTGAGTCAATGAATTAGGGCAGAAAATGTGCATTCGTTTGTTAGTTGTTGCTAACTAACGACCTTGTTGCTCTTCCATTTTTGTTTCACACATTAAAAACTATGCAATGAGATTTGGAGCATGATGAAATTAATTCTTAAGATTTTGTTTGATTCTAAACTTTCAGCCACTTAACCTACTAAATATCTCCATTTGGATTTCTATACTGAAATTTAAATTATGTTTATAGCAAAAGTATTCACATTATTTGTAAAACAATATAACTTTTCAAACATCCATTATTTGAAAAGTAGCCAAATCAATATATAATGTAATTATATCAATACAACACTCGTATGCTCCAATATGATTTTATAGGTGTTTAATGCATAACTTACTACTCTCATATCAACTCAAAAGTTTAGGCTAAGGGATTCTTTCGAGTAAATTTAATTATACAAGCACTTTTACACTCATATGTGTTTATAATGTGACTATGACATTACCATACATTCCAACCAAAAAACTTAGGTTGATGGAGTTCTTTCTAGCAAATTTAATCATATTAGTACTTTTTAACTCTCGTATGCGTCCCATTATGACTATGCCATTACCATAACTTCATATGCTCTTACCAACCCAAAAGCTTAAAACTGATGGATTCTTTGAAGTAAACCGATGCTTCATTTCCCAAAAGCTTAAAACCGATGCTTCATTTCCCATTTTCCCTTGTTTGAATAGTAAAATTCTCAATACAAGATCTCTATGGAACAACCCATTTGTCATGAACTGAAAATTTTTCTTGGGGGATTGATTAAACAGGAACTGCCCGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGAATTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACATAATGGATTATTACAGAGCATTAATCCTCCAAGTTACTTTGATGATAGCAATAATGTAAACTCATTGTGGGAACCTCTTTGGACATGAATTTTATTTAGTTTTTTAGGTTTGTGGATGTAAGGTGTTTGATAAAATGCTCCAATGAAGTTTCTCCAAACTCTTTTGAGACCCAAATTTGAGGTTGTGGGTAGGAGAAACTTTGTGGAAAAAATACAACAGAAATTTTACTTTTCTTGTTATGATTAAATTAGTGTGTACTGAAATGGACAAAACAAAAGATGGGAAACCAAAGCTTTATTAGGGATATGTCTTTATCCATAATCTCTATGTTTAGGCCAAAAAAGAAAAAGGAAAAAAAAGAAAAGTAAAGCATAGATGCCTTGGCATAATCAATGTGAAAGAGATGTATACCAATTGCTTAACTATCTCTACTTTGAAATAAAATATTCATTAACAAGTAAGATATTTTCAAAAATGGAAAACTTTGATATTTGATATCATCGTTGAAGGAATATTTAGGTGCAG

mRNA sequence

TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGTTTCTTTGCTCCGATCATCGGAAATGGAAGGAAGTGACACAATCACAATCACCACCGTTTCTTCAACTCCACTATCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCGCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATCTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCACTGAACCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCTTGCAGGAACTGCCCGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGAATTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACATAATGGATTATTACAGAGCATTAATCCTCCAAGTTACTTTGATGATAGCAATAATGTAAACTCATTGTGGGAACCTCTTTGGACATGAATTTTATTTAGTTTTTTAGGTTTGTGGATGTAAGGTGTTTGATAAAATGCTCCAATGAAGTTTCTCCAAACTCTTTTGAGACCCAAATTTGAGGTTGTGGGTAGGAGAAACTTTGTGGAAAAAATACAACAGAAATTTTACTTTTCTTGTTATGATTAAATTAGTGTGTACTGAAATGGACAAAACAAAAGATGGGAAACCAAAGCTTTATTAGGGATATGTCTTTATCCATAATCTCTATGTTTAGGCCAAAAAAGAAAAAGGAAAAAAAAGAAAAGTAAAGCATAGATGCCTTGGCATAATCAATGTGAAAGAGATGTATACCAATTGCTTAACTATCTCTACTTTGAAATAAAATATTCATTAACAAGTAAGATATTTTCAAAAATGGAAAACTTTGATATTTGATATCATCGTTGAAGGAATATTTAGGTGCAG

Coding sequence (CDS)

ATGGAAGGAAGTGACACAATCACAATCACCACCGTTTCTTCAACTCCACTATCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCGCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATCTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCACTGAACCGGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCTTGCAGGAACTGCCCGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGAATTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACATAATGGATTATTACAGAGCATTAATCCTCCAAGTTACTTTGATGATAGCAATAATGTAAACTCATTGTGGGAACCTCTTTGGACATGA

Protein sequence

MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPPSYFDDSNNVNSLWEPLWT

Homology

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BLAST of PI0023387 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 8.1e-55
Identity = 120/191 (62.83%), Postives = 141/191 (73.82%), Query Frame = 0


Query: 11  TVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAH 70
           +V++TP+  S SSS  P+  P V+LSPCAACKILRRRCAERCVLAPYFPPT+PAKF IAH
Sbjct: 8   SVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAH 67

Query: 71  RVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQL 130
           RVFGASNIIKFLQELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+ELQAQL
Sbjct: 68  RVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQL 127

Query: 131 AKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPPSYFDDSNNVN 190
           AKAQ E+VNMQ Q++NL+  +     Q  Q  D  +           N   + +D +N N
Sbjct: 128 AKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFES--------NDLGFLEDKSNTN 187

Query: 191 S---LWEPLWT 199
           S    W+PLWT
Sbjct: 188 SSMLWWDPLWT 189

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BLAST of PI0023387 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-54
Identity = 125/223 (56.05%), Postives = 153/223 (68.61%), Query Frame = 0


Query: 4   SDTITITTVSSTPLSQSPSSSSSPAPP--------PPVILSPCAACKILRRRCAERCVLA 63
           +  +   T ++TP++ SPS +SSP PP        PPV+LSPCAACKILRRRCA++CVLA
Sbjct: 15  ASAVAKVTETTTPVN-SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLA 74

Query: 64  PYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGA 123
           PYFPPT+PAKF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGA
Sbjct: 75  PYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGA 134

Query: 124 ICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF---- 183
           I  LQ+QV+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q   SF    
Sbjct: 135 IYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSF 194

Query: 184 ---DEFNGSPHNGLLQSINPPSYFDDSNNVN----SLWEPLWT 199
              DEF  SP     +  N   + +D+NN N    S W+PLWT
Sbjct: 195 ESGDEFISSPD----EESNDLGFLEDNNNNNNSSMSWWDPLWT 232

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BLAST of PI0023387 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 7.6e-37
Identity = 85/156 (54.49%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCA+CK+LRRRCA+ C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 96  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 155
           SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q            
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQN--------EPT 126

Query: 156 AQSHQSFDEFNGSPHNGLLQSINPPSYFDDSNNVNS 192
            QSH    E +   H  LL + N  +  + +NN N+
Sbjct: 127 LQSHHQVLELD-QDHKALLLNNNNINNCNTNNNNNN 153

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BLAST of PI0023387 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.8e-36
Identity = 76/110 (69.09%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCAACK+LRRRCA+ CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 96  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           S+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

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BLAST of PI0023387 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 30  PPPVI--LSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPE 89
           PP  +  ++PCAACK+LRRRCA+ C  +PYF P EP KFA  H+VFGASN+ K L E+PE
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 90  SQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           SQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

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BLAST of PI0023387 vs. ExPASy TrEMBL
Match: A0A5D3CSE3 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00590 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD++TITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180

Query: 181 SYFDDSNNVNSLWEPLWT 199
           SYFDDSNNVNSLWEPLWT
Sbjct: 181 SYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of PI0023387 vs. ExPASy TrEMBL
Match: A0A1S3CKA7 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD++TITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180

Query: 181 SYFDDSNNVNSLWEPLWT 199
           SYFDDSNNVNSLWEPLWT
Sbjct: 181 SYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of PI0023387 vs. ExPASy TrEMBL
Match: A0A0A0KCM5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 194/200 (97.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDTIT+TTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP--HNGLLQSIN 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP  HNGLLQSI+
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 199
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 200

[Close]

BLAST of PI0023387 vs. ExPASy TrEMBL
Match: A0A6J1J8I0 (LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.5e-88
Identity = 177/199 (88.94%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD  +I T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSD--SIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDEFNGSPHNGLLQSINP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFD+ N   H+GL  SI+ 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISS 180

Query: 181 PSYFDDSNNVNSLWEPLWT 199
           PSYFDD+ NVN LWEPLWT
Sbjct: 181 PSYFDDT-NVNPLWEPLWT 196

[Close]

BLAST of PI0023387 vs. ExPASy TrEMBL
Match: A0A6J1FT49 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448531 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.5e-88
Identity = 177/199 (88.94%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD  +I T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSD--SIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDEFNGSPHNGLLQSINP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFD+ N   H+GL  SI+ 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISS 180

Query: 181 PSYFDDSNNVNSLWEPLWT 199
           PSYFDD+ NVN LWEPLWT
Sbjct: 181 PSYFDDT-NVNPLWEPLWT 196

[Close]

BLAST of PI0023387 vs. NCBI nr
Match: XP_008463908.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK14330.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 384.8 bits (987), Expect = 4.5e-103
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD++TITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPP 180

Query: 181 SYFDDSNNVNSLWEPLWT 199
           SYFDDSNNVNSLWEPLWT
Sbjct: 181 SYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of PI0023387 vs. NCBI nr
Match: XP_004149555.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical protein Csa_022951 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 5.5e-101
Identity = 194/200 (97.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDTIT+TTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP--HNGLLQSIN 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP  HNGLLQSI+
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 199
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 200

[Close]

BLAST of PI0023387 vs. NCBI nr
Match: XP_038902542.1 (LOB domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 348.6 bits (893), Expect = 3.6e-92
Identity = 186/199 (93.47%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAP-PPPVILSPCAACKILRRRCAERCVLAPYFP 60
           MEGSD  ++TTVSSTPLSQSPSSSSS AP PPPV+LSPCAACKILRRRCAERCVLAPYFP
Sbjct: 1   MEGSD--SVTTVSSTPLSQSPSSSSSLAPSPPPVVLSPCAACKILRRRCAERCVLAPYFP 60

Query: 61  PTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQL 120
           PTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQL
Sbjct: 61  PTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQL 120

Query: 121 QKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINP 180
           QKQVNELQAQLAKAQAEVVNMQCQQANLV+FVCRELAQSHQSFD+FNGSPHNGL QSI+ 
Sbjct: 121 QKQVNELQAQLAKAQAEVVNMQCQQANLVSFVCRELAQSHQSFDDFNGSPHNGLFQSIS- 180

Query: 181 PSYFDDSNNVNSLWEPLWT 199
           PSYFDDS NVNSLWEPLWT
Sbjct: 181 PSYFDDS-NVNSLWEPLWT 195

[Close]

BLAST of PI0023387 vs. NCBI nr
Match: XP_022943961.1 (LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB domain-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 333.2 bits (853), Expect = 1.5e-87
Identity = 177/199 (88.94%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD  +I T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSD--SIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDEFNGSPHNGLLQSINP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFD+ N   H+GL  SI+ 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISS 180

Query: 181 PSYFDDSNNVNSLWEPLWT 199
           PSYFDD+ NVN LWEPLWT
Sbjct: 181 PSYFDDT-NVNPLWEPLWT 196

[Close]

BLAST of PI0023387 vs. NCBI nr
Match: XP_023512010.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 2.0e-87
Identity = 177/199 (88.94%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MEGSDTITITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD  +I T+SSTP S SPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSD--SIITLSSTPPSPSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDEFNGSPHNGLLQSINP 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFD+ N   H+GL QSI+ 
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFQSISS 180

Query: 181 PSYFDDSNNVNSLWEPLWT 199
           PSYFDD+ NVN LWEPLWT
Sbjct: 181 PSYFDDT-NVNPLWEPLWT 196

[Close]

BLAST of PI0023387 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 214.9 bits (546), Expect = 5.7e-56
Identity = 120/191 (62.83%), Postives = 141/191 (73.82%), Query Frame = 0


Query: 11  TVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAH 70
           +V++TP+  S SSS  P+  P V+LSPCAACKILRRRCAERCVLAPYFPPT+PAKF IAH
Sbjct: 8   SVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAH 67

Query: 71  RVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQL 130
           RVFGASNIIKFLQELPESQR DAV+S+VYEA ARIRDPVYG AGAI  LQ+QV+ELQAQL
Sbjct: 68  RVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQL 127

Query: 131 AKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPHNGLLQSINPPSYFDDSNNVN 190
           AKAQ E+VNMQ Q++NL+  +     Q  Q  D  +           N   + +D +N N
Sbjct: 128 AKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFES--------NDLGFLEDKSNTN 187

Query: 191 S---LWEPLWT 199
           S    W+PLWT
Sbjct: 188 SSMLWWDPLWT 189

[Close]

BLAST of PI0023387 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55
Identity = 125/223 (56.05%), Postives = 153/223 (68.61%), Query Frame = 0


Query: 4   SDTITITTVSSTPLSQSPSSSSSPAPP--------PPVILSPCAACKILRRRCAERCVLA 63
           +  +   T ++TP++ SPS +SSP PP        PPV+LSPCAACKILRRRCA++CVLA
Sbjct: 15  ASAVAKVTETTTPVN-SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLA 74

Query: 64  PYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGA 123
           PYFPPT+PAKF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGA
Sbjct: 75  PYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGA 134

Query: 124 ICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF---- 183
           I  LQ+QV+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q   SF    
Sbjct: 135 IYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSF 194

Query: 184 ---DEFNGSPHNGLLQSINPPSYFDDSNNVN----SLWEPLWT 199
              DEF  SP     +  N   + +D+NN N    S W+PLWT
Sbjct: 195 ESGDEFISSPD----EESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of PI0023387 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 155.2 bits (391), Expect = 5.4e-38
Identity = 85/156 (54.49%), Postives = 107/156 (68.59%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCA+CK+LRRRCA+ C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 96  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 155
           SLV+EA+AR+RDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q            
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQN--------EPT 126

Query: 156 AQSHQSFDEFNGSPHNGLLQSINPPSYFDDSNNVNS 192
            QSH    E +   H  LL + N  +  + +NN N+
Sbjct: 127 LQSHHQVLELD-QDHKALLLNNNNINNCNTNNNNNN 153

[Close]

BLAST of PI0023387 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-37
Identity = 76/110 (69.09%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCAACK+LRRRCA+ CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 96  SLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           S+VYEA+AR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of PI0023387 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-33
Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 30  PPPVI--LSPCAACKILRRRCAERCVLAPYFPPTEPAKFAIAHRVFGASNIIKFLQELPE 89
           PP  +  ++PCAACK+LRRRCA+ C  +PYF P EP KFA  H+VFGASN+ K L E+PE
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 90  SQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           SQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

The following BLAST results are available for this feature:

BLAST of PI0023387 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	8.1e-55	62.83	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	2.3e-54	56.05	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	7.6e-37	54.49	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	3.8e-36	69.09	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	1.3e-31	57.63	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of PI0023387 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSE3	2.2e-103	98.99	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CKA7	2.2e-103	98.99	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=...	[more]
A0A0A0KCM5	2.7e-101	97.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV...	[more]
A0A6J1J8I0	7.5e-88	88.94	LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3...	[more]
A0A6J1FT49	7.5e-88	88.94	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114485...	[more]

BLAST of PI0023387 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463908.1	4.5e-103	98.99	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB...	[more]
XP_004149555.1	5.5e-101	97.00	LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical prote...	[more]
XP_038902542.1	3.6e-92	93.47	LOB domain-containing protein 1 [Benincasa hispida]	[more]
XP_022943961.1	1.5e-87	88.94	LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB do...	[more]
XP_023512010.1	2.0e-87	88.94	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0023387 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	5.7e-56	62.83	LOB domain-containing protein 1	[more]
AT2G28500.1	1.7e-55	56.05	LOB domain-containing protein 11	[more]
AT2G30130.1	5.4e-38	54.49	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	2.7e-37	69.09	LOB domain-containing protein 4	[more]
AT2G40470.1	8.9e-33	57.63	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 12..195
None	No IPR available	PANTHER	PTHR31301:SF141	LOB DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 12..195
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 37..134 e-value: 3.8E-41 score: 139.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 36..137 score: 26.143148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023387.1	PI0023387.1	mRNA