PI0023371 (gene) Melon (PI 482460) v1

Overview


Name	PI0023371
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	At4g19430
Location	chr07: 20203076 .. 20203889 (-)
RNA-Seq Expression	PI0023371
Synteny	PI0023371

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCATACCTCTACTATAAAACCACTCAAATAAAACTTCACCTTCTTAAATAAACTTCATAAGAAAAAGGGGAAAAGAAAAAAAATCTTCCTCTAAGCCTTCTCTTCCCATCATCCATTAATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAAGGCTTGAGAAGAAGGGAAAAAAGAGAATCAAAAGGGAGAGTTTAAAGAGAGAAAGCAATGGCTATTATTCATACAAGGAAGTGAGTGACAATGAAGAGCATGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAAGAAGGGTCAATTTGGGACTGCAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGCCATATATTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTATGAAGATGAGAGGATGAAGAAGATTGAAGTGATTTCTATTGATCCTTATTTCTCAGTGCCTGTTTTGCCTTATACTACTATGGCTAATTGTATGTAAAATGATATGAAGGCATAAGAATGAGTGGTTTAATTACTAGTAAGTGTGTTTGTAATTGTACCAACTTATTTGTGTGTCTAGGCTTATATTTGGGGTCCATTTTGGAACTTTTTTGAAAACAAAAGGAAGAGCCTTTTTCCTTTTGTTTTCAACATTGTTTGTAAAAAGTATGATTTGGTGGCTAGTAATAAGTTGTAAAAATTATTGTGTACTAGAAATTTTTGTTTATAAGCTTGTAATTTTGGATGTCTAGAAGAGATAACAACTAAAAAAGAATATATATTTAGAGGTGTTTGAATTGACTTTA

mRNA sequence

CCCCATACCTCTACTATAAAACCACTCAAATAAAACTTCACCTTCTTAAATAAACTTCATAAGAAAAAGGGGAAAAGAAAAAAAATCTTCCTCTAAGCCTTCTCTTCCCATCATCCATTAATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAAGGCTTGAGAAGAAGGGAAAAAAGAGAATCAAAAGGGAGAGTTTAAAGAGAGAAAGCAATGGCTATTATTCATACAAGGAAGTGAGTGACAATGAAGAGCATGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAAGAAGGGTCAATTTGGGACTGCAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGCCATATATTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTATGAAGATGAGAGGATGAAGAAGATTGAAGTGATTTCTATTGATCCTTATTTCTCAGTGCCTGTTTTGCCTTATACTACTATGGCTAATTGTATGTAAAATGATATGAAGGCATAAGAATGAGTGGTTTAATTACTAGTAAGTGTGTTTGTAATTGTACCAACTTATTTGTGTGTCTAGGCTTATATTTGGGGTCCATTTTGGAACTTTTTTGAAAACAAAAGGAAGAGCCTTTTTCCTTTTGTTTTCAACATTGTTTGTAAAAAGTATGATTTGGTGGCTAGTAATAAGTTGTAAAAATTATTGTGTACTAGAAATTTTTGTTTATAAGCTTGTAATTTTGGATGTCTAGAAGAGATAACAACTAAAAAAGAATATATATTTAGAGGTGTTTGAATTGACTTTA

Coding sequence (CDS)

ATGTCTGTTTCCACCCAACTTCTAGGGCTTGGAAGGCTTGAGAAGAAGGGAAAAAAGAGAATCAAAAGGGAGAGTTTAAAGAGAGAAAGCAATGGCTATTATTCATACAAGGAAGTGAGTGACAATGAAGAGCATGGAGATAGCAAGGGAAGAAGAAGAAGAAGAAAGAAGGGTCAATTTGGGACTGCAAGAGATGTTCTTCACATGAATTTTTGGTATTTTACTTCAACAATCAGCCATATATTAAGGAAGGCAAAAGCCTTTTATAATGAGTGTTGCTGTGATGCCTATGAAGATGAGAGGATGAAGAAGATTGAAGTGATTTCTATTGATCCTTATTTCTCAGTGCCTGTTTTGCCTTATACTACTATGGCTAATTGTATGTAA

Protein sequence

MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVSDNEEHGDSKGRRRRRKKGQFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDPYFSVPVLPYTTMANCM

Homology

[Close]

BLAST of PI0023371 vs. ExPASy TrEMBL
Match: A0A0A0L609 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.3e-60
Identity = 120/130 (92.31%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVSDNEEHGDSKGRRR--RRKKG 60
           MSVSTQLL LGRLEKKGKKRIKRESLKRE+NGYYSYK+VSDNEEHG+SKGRRR  RRKKG
Sbjct: 1   MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60

Query: 61  QFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDPYFSVPV 120
           QFGT RDVLHMNFWYFTSTISHILRKAKAFYNECCCDA+EDERMKK EVISIDPYFS+PV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120

Query: 121 LPYTTMANCM 129
           LPYTTMANCM
Sbjct: 121 LPYTTMANCM 130

[Close]

BLAST of PI0023371 vs. ExPASy TrEMBL
Match: A0A5D3BSQ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00900 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.4e-55
Identity = 114/130 (87.69%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVSDNEEHGDSKG--RRRRRKKG 60
           MS+STQLLGLGRLEKKG+KRIKRES KRE NGYYSYKEVSDN EHGDSKG  RRRRRKKG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  QFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDPYFSVPV 120
           QFGT RDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERM +    SIDPYFS+PV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120

Query: 121 LPYTTMANCM 129
           LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126

[Close]

BLAST of PI0023371 vs. ExPASy TrEMBL
Match: A0A5A7UDK1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001040 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.2e-55
Identity = 113/130 (86.92%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVSDNEEHGDSKG--RRRRRKKG 60
           MS+STQLLGLGRLEKKG+K+IKRES KRE NGYYSYKEVSDN EHGDSKG  RRRRRKKG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  QFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDPYFSVPV 120
           QFGT RDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERM +    SIDPYFS+PV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120

Query: 121 LPYTTMANCM 129
           LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126

[Close]

BLAST of PI0023371 vs. ExPASy TrEMBL
Match: A0A6J1FKP2 (uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC111446301 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.5e-38
Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVS--DNEEHGDSKGRR------ 60
           MSVS Q+LGL  L+KK KK  +RE L+RE  G++S  +    ++E+ GD KGRR      
Sbjct: 1   MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60

Query: 61  RRRKKGQFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDP 120
           RRRK  QFG AR VL  N WYFTSTIS+ILRKAKAFYNECCCDAYEDERMK++EV  +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSVPVLPYTTMANCM 129
           YFS+PV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of PI0023371 vs. ExPASy TrEMBL
Match: A0A1Q3D8H6 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32173 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.3e-12
Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 43  EEHGDSKGRR---RRRKKGQFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYED 102
           EEH ++ G +   R++K G +  A     +  WY TS+IS+ILRKAKAFYNECCCDA+ED
Sbjct: 31  EEHEENMGEKYMPRKKKPGHW--ALQFPRLGIWYMTSSISYILRKAKAFYNECCCDAFED 90

Query: 103 ERMKKIEVISIDPYFSVPVLPYTTMANCM 129
             +   +V  +D YFS PV+P  T++  M
Sbjct: 91  PVLMGKQVTLVDSYFSTPVVPPPTISPYM 117

[Close]

BLAST of PI0023371 vs. NCBI nr
Match: KGN55571.1 (hypothetical protein Csa_012627 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 6.8e-60
Identity = 120/130 (92.31%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVSDNEEHGDSKGRRR--RRKKG 60
           MSVSTQLL LGRLEKKGKKRIKRESLKRE+NGYYSYK+VSDNEEHG+SKGRRR  RRKKG
Sbjct: 1   MSVSTQLLELGRLEKKGKKRIKRESLKRENNGYYSYKDVSDNEEHGESKGRRRRKRRKKG 60

Query: 61  QFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDPYFSVPV 120
           QFGT RDVLHMNFWYFTSTISHILRKAKAFYNECCCDA+EDERMKK EVISIDPYFS+PV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAFEDERMKKNEVISIDPYFSMPV 120

Query: 121 LPYTTMANCM 129
           LPYTTMANCM
Sbjct: 121 LPYTTMANCM 130

[Close]

BLAST of PI0023371 vs. NCBI nr
Match: TYK01842.1 (hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 2.9e-55
Identity = 114/130 (87.69%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVSDNEEHGDSKG--RRRRRKKG 60
           MS+STQLLGLGRLEKKG+KRIKRES KRE NGYYSYKEVSDN EHGDSKG  RRRRRKKG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKRIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  QFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDPYFSVPV 120
           QFGT RDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERM +    SIDPYFS+PV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120

Query: 121 LPYTTMANCM 129
           LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126

[Close]

BLAST of PI0023371 vs. NCBI nr
Match: KAA0052276.1 (hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 6.6e-55
Identity = 113/130 (86.92%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVSDNEEHGDSKG--RRRRRKKG 60
           MS+STQLLGLGRLEKKG+K+IKRES KRE NGYYSYKEVSDN EHGDSKG  RRRRRKKG
Sbjct: 1   MSLSTQLLGLGRLEKKGRKKIKRESSKRERNGYYSYKEVSDNAEHGDSKGRRRRRRRKKG 60

Query: 61  QFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDPYFSVPV 120
           QFGT RDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERM +    SIDPYFS+PV
Sbjct: 61  QFGTTRDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMFQ----SIDPYFSMPV 120

Query: 121 LPYTTMANCM 129
           LPYTTMANC+
Sbjct: 121 LPYTTMANCL 126

[Close]

BLAST of PI0023371 vs. NCBI nr
Match: KAG6608012.1 (hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.3 bits (425), Expect = 4.3e-38
Identity = 87/136 (63.97%), Postives = 104/136 (76.47%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVS--DNEEHGDSKGRRRRRKKG 60
           MSVS Q+LGL  L+KK KK  +RE L+RE  G++S  +    ++E+ GD KGRRR +K+G
Sbjct: 1   MSVSIQVLGLTSLQKKEKKCHRREILERERTGHFSTSQHGHHESEQPGDGKGRRREKKQG 60

Query: 61  ------QFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDP 120
                 QFG AR VL  N WYFTSTIS+ILRKAKAFYNECCCDAYEDERMK++EV  +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSVPVLPYTTMANCM 129
           YFS+PV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of PI0023371 vs. NCBI nr
Match: XP_022940822.1 (uncharacterized protein LOC111446301 [Cucurbita moschata])

HSP 1 Score: 167.5 bits (423), Expect = 7.3e-38
Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 1   MSVSTQLLGLGRLEKKGKKRIKRESLKRESNGYYSYKEVS--DNEEHGDSKGRR------ 60
           MSVS Q+LGL  L+KK KK  +RE L+RE  G++S  +    ++E+ GD KGRR      
Sbjct: 1   MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQG 60

Query: 61  RRRKKGQFGTARDVLHMNFWYFTSTISHILRKAKAFYNECCCDAYEDERMKKIEVISIDP 120
           RRRK  QFG AR VL  N WYFTSTIS+ILRKAKAFYNECCCDAYEDERMK++EV  +DP
Sbjct: 61  RRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDP 120

Query: 121 YFSVPVLPYTTMANCM 129
           YFS+PV PYTTMANCM
Sbjct: 121 YFSMPVFPYTTMANCM 136

[Close]

BLAST of PI0023371 vs. TAIR 10
Match: AT4G19430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-10
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 37  KEVSDNEEHGDSKGRRRRRKKGQFGTA-------RDVLHMN-FWYFTSTISHILRKAKAF 96
           +E ++ +EHG     +   K G+  TA       RDV  ++  WY   +ISHILRKA+AF
Sbjct: 78  EEETNQQEHG-----KVSNKDGKSITATKYGDLRRDVARLSLLWYMKCSISHILRKARAF 137

Query: 97  YNECCCDAYEDERMKKIEVISIDPYFSVPVL 120
           YNE CCD Y +     +    ++PYFS+PV+
Sbjct: 138 YNEFCCDTYAESNTMAV----VEPYFSIPVI 159

The following BLAST results are available for this feature:

BLAST of PI0023371 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023371 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L609	3.3e-60	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G669230 PE=4 SV=1	[more]
A0A5D3BSQ8	1.4e-55	87.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UDK1	3.2e-55	86.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1FKP2	3.5e-38	64.71	uncharacterized protein LOC111446301 OS=Cucurbita moschata OX=3662 GN=LOC1114463...	[more]
A0A1Q3D8H6	3.3e-12	47.19	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]

BLAST of PI0023371 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55571.1	6.8e-60	92.31	hypothetical protein Csa_012627 [Cucumis sativus]	[more]
TYK01842.1	2.9e-55	87.69	hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa]	[more]
KAA0052276.1	6.6e-55	86.92	hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa]	[more]
KAG6608012.1	4.3e-38	63.97	hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022940822.1	7.3e-38	64.71	uncharacterized protein LOC111446301 [Cucurbita moschata]	[more]

BLAST of PI0023371 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19430.1	6.8e-10	39.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023371.1	PI0023371.1	mRNA