PI0023341 (gene) Melon (PI 482460) v1

Overview


Name	PI0023341
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	F-box protein At1g67340
Location	chr10: 17700500 .. 17702353 (+)
RNA-Seq Expression	PI0023341
Synteny	PI0023341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGAAAGAGGTGTGGTGGTGGTGGGAGTGTTATAGTTTGGTCTAACTATATAAAGCTTGGCATTTGCTTTTTGGGTTTTACCCTAAGAGAAGGAAGAAAAAAAAAAGAAACAAAGAAATTGGTGGATTTAATAAGAGGAAACAGCCACAAACAAAAGAGGCTGAAACAAGAATCATCATCTTCATCATCCTCCTCCATGAGAACTCGAACAGGCCTATCTTATCCTCCACTTCAACCTACAACCTTTTCTTCCGGCAACCGGAAAAGATCACTCCATGTTGCAGCCGACCGCCCCTTTTGCCGCAAAAAAAACAAGCTCTCTTCCGACATCAAAACACCCACCTCCGATTTGTTCGATTCTTTGCCGGACGACCTCGTCATTACTATTCTCTCTAATCTCAGCTCCGCCGCTTCTTCCCCCTCCGATTTCATCAATATCTTACTAACGTAATTCCTTTTCCTTTTTTAATTTAGGGTTTTTTTTTTAGTAATGGGTTGGATTTTAAATTTGATTTTTTGGGTTTCAGATGCAAGAGATTAAACAATTTAGGACTTAATCCCATGGTTTTATCAAGAGCTTCTCAAAAGACTTTTGCAATTAGGGCAAAGAATTGGACGGAATCCGCTCACCGGTTTCTGAAACAGTGTTCAGATGCCGGAAATGTCGAGGCCTGTTATACACTTGGCATGGTGAGTTTTTAATTTTATATATTCTTTTAATTTATGCGTATTTGTTTTCTTTTGTTTTTTTTTTATTCTAATCCCATTTTGAAAGGTATAAACATTCCTTTTCTGTTTTTTGATTTTAATGATTTTAAAAACTGATTAGCGATTCGCGCATTGATTTTTTTATTCAGATTCGTTTCTACTGTTTGCAAAATCGTGGTAGCGGAGCTTCGTTAATGGCGAAGGCAGCGATTTGTTCCCACGCGCCGGCTCTTTACTCACTCGCCGTCATTCAGTTCAATGGCAGCGGCGGATCCAAGAACGACAAGGACCTCCGCGCCGGAGTTGCACTTTGCGCACGTGCAGCGTTTCTCGGCCACATCGATGCCCTTAGAGAGCTTGGCCATTGCCTTCAAGACGGTTACGGAGTTCGCCAGAACATAACGGAAGGTCGTCGTTTTCTTGTTCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTGTCATCGGAGGCGGCTTCTTCCGTTGCCGCATCGCGTTCGTGCCTCACGTGGAACACTCACCCTCCTCATCACCGGCACGTTACCGGCTCGGGATGTCCGTTGTTAAGCGATTTCGGATGCAATATTCCCGCACCGGAGGCTCATCCAGCAAGTCAGTTTTTAGCGGAATGGTTCGAGGCACGTGGGGGGTCGACCGGGAATGGGCTGAGGCTATGTTCGCACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGATGTTCCGTTTGTGGTGCCGTTAATTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGTGCTCCGGTTGAACGTTGGCTTGATGATAACGGTGACGGTCTGGACGATGTGGCCGATGATATCATGGACGAAAGTTAAAATGAAAATTTTTAAAAACGTTAGTTGACGGTGACGACTGCCGTTTATAAACGTTGGCGGCTTCTCGTAATTTTAGTCGAAGAGACGTAAAAGTAAAGGGAGAGAATAAAAAAAAAAAGAAAAAAAGGAAAAAGAAAGGCCAATTTTCTTTTAAGATATTAATTTTATCTTATAACCATGGCAATCCAATCGGCGCGGCGCTGCGCGGCGGGGCTATTAATGTCCTTTTTGTGTACAGGGTGGCGGTGCGTTCTTTTTTT

mRNA sequence

ATTTGAAAGAGGTGTGGTGGTGGTGGGAGTGTTATAGTTTGGTCTAACTATATAAAGCTTGGCATTTGCTTTTTGGGTTTTACCCTAAGAGAAGGAAGAAAAAAAAAAGAAACAAAGAAATTGGTGGATTTAATAAGAGGAAACAGCCACAAACAAAAGAGGCTGAAACAAGAATCATCATCTTCATCATCCTCCTCCATGAGAACTCGAACAGGCCTATCTTATCCTCCACTTCAACCTACAACCTTTTCTTCCGGCAACCGGAAAAGATCACTCCATGTTGCAGCCGACCGCCCCTTTTGCCGCAAAAAAAACAAGCTCTCTTCCGACATCAAAACACCCACCTCCGATTTGTTCGATTCTTTGCCGGACGACCTCGTCATTACTATTCTCTCTAATCTCAGCTCCGCCGCTTCTTCCCCCTCCGATTTCATCAATATCTTACTAACATGCAAGAGATTAAACAATTTAGGACTTAATCCCATGGTTTTATCAAGAGCTTCTCAAAAGACTTTTGCAATTAGGGCAAAGAATTGGACGGAATCCGCTCACCGGTTTCTGAAACAGTGTTCAGATGCCGGAAATGTCGAGGCCTGTTATACACTTGGCATGATTCGTTTCTACTGTTTGCAAAATCGTGGTAGCGGAGCTTCGTTAATGGCGAAGGCAGCGATTTGTTCCCACGCGCCGGCTCTTTACTCACTCGCCGTCATTCAGTTCAATGGCAGCGGCGGATCCAAGAACGACAAGGACCTCCGCGCCGGAGTTGCACTTTGCGCACGTGCAGCGTTTCTCGGCCACATCGATGCCCTTAGAGAGCTTGGCCATTGCCTTCAAGACGGTTACGGAGTTCGCCAGAACATAACGGAAGGTCGTCGTTTTCTTGTTCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTGTCATCGGAGGCGGCTTCTTCCGTTGCCGCATCGCGTTCGTGCCTCACGTGGAACACTCACCCTCCTCATCACCGGCACGTTACCGGCTCGGGATGTCCGTTGTTAAGCGATTTCGGATGCAATATTCCCGCACCGGAGGCTCATCCAGCAAGTCAGTTTTTAGCGGAATGGTTCGAGGCACGTGGGGGGTCGACCGGGAATGGGCTGAGGCTATGTTCGCACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGATGTTCCGTTTGTGGTGCCGTTAATTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGTGCTCCGGTTGAACGTTGGCTTGATGATAACGGTGACGGTCTGGACGATGTGGCCGATGATATCATGGACGAAAGTTAAAATGAAAATTTTTAAAAACGTTAGTTGACGGTGACGACTGCCGTTTATAAACGTTGGCGGCTTCTCGTAATTTTAGTCGAAGAGACGTAAAAGTAAAGGGAGAGAATAAAAAAAAAAAGAAAAAAAGGAAAAAGAAAGGCCAATTTTCTTTTAAGATATTAATTTTATCTTATAACCATGGCAATCCAATCGGCGCGGCGCTGCGCGGCGGGGCTATTAATGTCCTTTTTGTGTACAGGGTGGCGGTGCGTTCTTTTTTT

Coding sequence (CDS)

ATGAGAACTCGAACAGGCCTATCTTATCCTCCACTTCAACCTACAACCTTTTCTTCCGGCAACCGGAAAAGATCACTCCATGTTGCAGCCGACCGCCCCTTTTGCCGCAAAAAAAACAAGCTCTCTTCCGACATCAAAACACCCACCTCCGATTTGTTCGATTCTTTGCCGGACGACCTCGTCATTACTATTCTCTCTAATCTCAGCTCCGCCGCTTCTTCCCCCTCCGATTTCATCAATATCTTACTAACATGCAAGAGATTAAACAATTTAGGACTTAATCCCATGGTTTTATCAAGAGCTTCTCAAAAGACTTTTGCAATTAGGGCAAAGAATTGGACGGAATCCGCTCACCGGTTTCTGAAACAGTGTTCAGATGCCGGAAATGTCGAGGCCTGTTATACACTTGGCATGATTCGTTTCTACTGTTTGCAAAATCGTGGTAGCGGAGCTTCGTTAATGGCGAAGGCAGCGATTTGTTCCCACGCGCCGGCTCTTTACTCACTCGCCGTCATTCAGTTCAATGGCAGCGGCGGATCCAAGAACGACAAGGACCTCCGCGCCGGAGTTGCACTTTGCGCACGTGCAGCGTTTCTCGGCCACATCGATGCCCTTAGAGAGCTTGGCCATTGCCTTCAAGACGGTTACGGAGTTCGCCAGAACATAACGGAAGGTCGTCGTTTTCTTGTTCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTGTCATCGGAGGCGGCTTCTTCCGTTGCCGCATCGCGTTCGTGCCTCACGTGGAACACTCACCCTCCTCATCACCGGCACGTTACCGGCTCGGGATGTCCGTTGTTAAGCGATTTCGGATGCAATATTCCCGCACCGGAGGCTCATCCAGCAAGTCAGTTTTTAGCGGAATGGTTCGAGGCACGTGGGGGGTCGACCGGGAATGGGCTGAGGCTATGTTCGCACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGATGTTCCGTTTGTGGTGCCGTTAATTACTGCTCACGTGCGTGTCAGGCGCTGGATTGGAAACTCCGCCATAAGATGGATTGTGCTCCGGTTGAACGTTGGCTTGATGATAACGGTGACGGTCTGGACGATGTGGCCGATGATATCATGGACGAAAGTTAA

Protein sequence

MRTRTGLSYPPLQPTTFSSGNRKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAVLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFEARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLDDNGDGLDDVADDIMDES

Homology

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BLAST of PI0023341 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 1.7e-138
Identity = 244/336 (72.62%), Postives = 278/336 (82.74%), Query Frame = 0


Query: 47  TPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTF 106
           T  +DL DS+PDDLVI+IL  L S +  P+DFIN+LLTCKRL  L +NP+VLSR S K  
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 107 AIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPAL 166
           A++A NW+E +HRFLK+C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 167 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGR 226
           YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN++EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 227 RFLVQANARELAAVLSSEAASSVAASRSCLTWNTHP----PHHRHVTGSGCPLLSDFGCN 286
           RFLVQANARELAAVLS    S + A  + L+ +  P    P+H   T   CPLLSDFGCN
Sbjct: 218 RFLVQANARELAAVLS----SGIQARSTWLSLSQPPPPVVPNHGQQT---CPLLSDFGCN 277

Query: 287 IPAPEAHPASQFLAEWFEARGGS-TGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCS 346
           +PAPE HPA++FLA+WF  RGG   G+GLRLCSH GCGRPETR+HEFRRCSVCG VNYCS
Sbjct: 278 VPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCS 337

Query: 347 RACQALDWKLRHKMDCAPVERWLDDNGDGLDDVADD 378
           RACQALDWKLRHKMDCAPV+RWL++   G  +V  D
Sbjct: 338 RACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQID 366

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BLAST of PI0023341 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 9.3e-108
Identity = 199/347 (57.35%), Postives = 254/347 (73.20%), Query Frame = 0


Query: 37  KKNKLSSDIKTPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPM 96
           KK +L ++     ++ F+ L DDL+I+IL  L+++ASSPSDF+ +L TCKRLN LGL+P+
Sbjct: 6   KKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPL 65

Query: 97  VLSRASQKTFAIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAK 156
           VLS+A  +T A+ A+ W++S+H+FLK C +AGN++A Y+LGMIRFYCLQN  SGASLMAK
Sbjct: 66  VLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAK 125

Query: 157 AAICSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 216
           AAI SHAPALYSL+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGY
Sbjct: 126 AAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGY 185

Query: 217 GVRQNITEGRRFLVQANARELAAVLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLL 276
           GV ++++EGRR L+QANARELA  L           RS L+           +G     L
Sbjct: 186 GVPRDVSEGRRLLIQANARELACSL-----------RSYLSLK---------SGDENETL 245

Query: 277 SDFGCNIPAPEAHPASQFLAEWFEARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGA 336
           +D    +P  E HP ++FL EWF +       GLR+CSH GCGRPETR HEFRRCSVCG 
Sbjct: 246 TDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGK 305

Query: 337 VNYCSRACQALDWKLRHKMDCAPVERWL---DDNGDGLDDVADDIMD 381
           VNYCSR CQALDW+ +HK++C P++ W+    + GD  + VA +I D
Sbjct: 306 VNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of PI0023341 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.1e-05
Identity = 32/104 (30.77%), Postives = 45/104 (43.27%), Query Frame = 0


Query: 274 PLLSDFGCNIPAPEAHPASQFLAEWFEARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSV 333
           P  +DF    P  E  P+    + +   + G+      LC   GC  P       +RCS 
Sbjct: 101 PRQNDFYSYEPPSEDPPSETGESVYLHLKSGA-----HLCRVCGCSGP-------KRCSR 160

Query: 334 CGAVNYCSRACQALDWKLRHKMDCAPVERWLDDNGDGLDDVADD 378
           C   +YCS+  Q+LDW+L HK  CA          D LD++  D
Sbjct: 161 CHKAHYCSKEHQSLDWRLGHKQACAQT--------DNLDNIVPD 184

[Close]

BLAST of PI0023341 vs. ExPASy Swiss-Prot
Match: Q9SJA1 (Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.3e-04
Identity = 28/73 (38.36%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 296 AEWFEARGGSTG-----------NGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRAC 355
           A++FE  GGS G           +    CS   CG+  T     ++CS C +V YCS AC
Sbjct: 36  AKYFEVGGGSGGFDRDHRRDFMVSDTAECS--VCGKATT-----KKCSRCKSVRYCSAAC 95

Query: 356 QALDWKLRHKMDC 358
           Q  DWK  HK+ C
Sbjct: 96  QTSDWKSGHKLKC 101

[Close]

BLAST of PI0023341 vs. ExPASy Swiss-Prot
Match: Q9FPS9 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 5.6e-04
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 330 RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 362
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of PI0023341 vs. ExPASy TrEMBL
Match: A0A5A7SUQ1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002260 PE=4 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 2.2e-216
Identity = 373/382 (97.64%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGNRKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPTTFSSGNRKR LHVAADRPFCRK+NK SSDIKTP SDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLHVAADRPFCRKRNKHSSDIKTPISDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSNL SAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNLCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360
           ARGGS GNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360

Query: 361 ERWLDDNGDGLDDVADDIMDES 383
           ERWLDDNGD  DDVADDIM+ES
Sbjct: 361 ERWLDDNGDVADDVADDIMEES 382

[Close]

BLAST of PI0023341 vs. ExPASy TrEMBL
Match: A0A1S3BE37 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103488887 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 6.3e-216
Identity = 372/382 (97.38%), Postives = 374/382 (97.91%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGNRKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPTTFSSGNRKR LHVAADRPFCRK+NK SSDIKTP SDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLHVAADRPFCRKRNKHSSDIKTPISDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSN  SAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNFCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360
           ARGGS GNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360

Query: 361 ERWLDDNGDGLDDVADDIMDES 383
           ERWLDDNGD  DDVADDIM+ES
Sbjct: 361 ERWLDDNGDVADDVADDIMEES 382

[Close]

BLAST of PI0023341 vs. ExPASy TrEMBL
Match: A0A0A0KTC5 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 PE=4 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 1.1e-215
Identity = 371/382 (97.12%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGNRKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPT F+SGNRKR  HVAADRPFCRK+NKLS  IKTPTSDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNT PPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360
           ARGGS GNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360

Query: 361 ERWLDDNGDGLDDVADDIMDES 383
           ERWLDDNGDG+DDVADDIMDES
Sbjct: 361 ERWLDDNGDGMDDVADDIMDES 382

[Close]

BLAST of PI0023341 vs. ExPASy TrEMBL
Match: A0A6J1GZ25 (F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 7.7e-190
Identity = 337/385 (87.53%), Postives = 349/385 (90.65%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGNRKRSLHVA---ADRPFCRKKNKLSSDIKTPTSDLFDSLP 60
           MRTR GL YP LQP  FS    ++  H A   ADR FCRK+NK S DIKTPTSDLFDSLP
Sbjct: 1   MRTRRGLCYPRLQPPFFSDNRVRKRTHDAAADADRQFCRKRNKPSPDIKTPTSDLFDSLP 60

Query: 61  DDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESA 120
           DDLVI+ILS LSSAASSPS+FINILLTCKRLN+LGLNP+VLSRAS K FAI A+NWTESA
Sbjct: 61  DDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTESA 120

Query: 121 HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGS 180
           HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGS
Sbjct: 121 HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNGS 180

Query: 181 GGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 240
           GGSKNDK+L AGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL
Sbjct: 181 GGSKNDKNLGAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 240

Query: 241 AAVLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAE 300
           AAVLSSEA SSVAASR+CLTWN H PHHRHVTGS CPLLSDFGCNIPAPE HPASQFLAE
Sbjct: 241 AAVLSSEAGSSVAASRTCLTWNPH-PHHRHVTGSACPLLSDFGCNIPAPEVHPASQFLAE 300

Query: 301 WFEARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WF ARGGS G+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 APVERWLDDNGDGLDDVADDIMDES 383
            PVERWLDDNGDG  D  DD+MDES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 384

[Close]

BLAST of PI0023341 vs. ExPASy TrEMBL
Match: A0A6J1KDE5 (F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.6e-187
Identity = 333/383 (86.95%), Postives = 346/383 (90.34%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGN-RKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPDD 60
           MRTR GL YP L    FS    RKR+   +ADR FCRK+NKLS DIKTPTSDLFDSLPDD
Sbjct: 1   MRTRRGLCYPRLDAAFFSDNRVRKRTHDASADRHFCRKRNKLSPDIKTPTSDLFDSLPDD 60

Query: 61  LVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHR 120
           LVI+ILS L +AASS S+FINILLTCKRLN+LGLNP+VLSRAS K FAI A+NWTESAHR
Sbjct: 61  LVISILSKLGAAASSSSEFINILLTCKRLNSLGLNPIVLSRASLKIFAISARNWTESAHR 120

Query: 121 FLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGG 180
           FLKQC+DAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGG
Sbjct: 121 FLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGG 180

Query: 181 SKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAA 240
           SKNDK LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAA
Sbjct: 181 SKNDKILRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAA 240

Query: 241 VLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWF 300
           VLSSEA SSV ASR+ LTWN H PHHRHVTGS CPLLSDFGCNIPAPEAHPASQFLAEWF
Sbjct: 241 VLSSEAGSSVTASRTFLTWNPH-PHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAEWF 300

Query: 301 EARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAP 360
            ARGGS G+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC P
Sbjct: 301 AARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCVP 360

Query: 361 VERWLDDNGDGLDDVADDIMDES 383
           VERWLDDNGDG  D   D+MDES
Sbjct: 361 VERWLDDNGDGGADGVVDMMDES 382

[Close]

BLAST of PI0023341 vs. NCBI nr
Match: KAA0034193.1 (F-box protein [Cucumis melo var. makuwa] >TYK15727.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 761.1 bits (1964), Expect = 4.4e-216
Identity = 373/382 (97.64%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGNRKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPTTFSSGNRKR LHVAADRPFCRK+NK SSDIKTP SDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLHVAADRPFCRKRNKHSSDIKTPISDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSNL SAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNLCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360
           ARGGS GNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360

Query: 361 ERWLDDNGDGLDDVADDIMDES 383
           ERWLDDNGD  DDVADDIM+ES
Sbjct: 361 ERWLDDNGDVADDVADDIMEES 382

[Close]

BLAST of PI0023341 vs. NCBI nr
Match: XP_008446037.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo])

HSP 1 Score: 759.6 bits (1960), Expect = 1.3e-215
Identity = 372/382 (97.38%), Postives = 374/382 (97.91%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGNRKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPTTFSSGNRKR LHVAADRPFCRK+NK SSDIKTP SDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLHVAADRPFCRKRNKHSSDIKTPISDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSN  SAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNFCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360
           ARGGS GNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360

Query: 361 ERWLDDNGDGLDDVADDIMDES 383
           ERWLDDNGD  DDVADDIM+ES
Sbjct: 361 ERWLDDNGDVADDVADDIMEES 382

[Close]

BLAST of PI0023341 vs. NCBI nr
Match: XP_004135325.1 (F-box protein At1g67340 [Cucumis sativus] >KGN51672.1 hypothetical protein Csa_008598 [Cucumis sativus])

HSP 1 Score: 758.8 bits (1958), Expect = 2.2e-215
Identity = 371/382 (97.12%), Postives = 375/382 (98.17%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGNRKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPT F+SGNRKR  HVAADRPFCRK+NKLS  IKTPTSDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNT PPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360
           ARGGS GNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360

Query: 361 ERWLDDNGDGLDDVADDIMDES 383
           ERWLDDNGDG+DDVADDIMDES
Sbjct: 361 ERWLDDNGDGMDDVADDIMDES 382

[Close]

BLAST of PI0023341 vs. NCBI nr
Match: XP_038893304.1 (F-box protein At1g67340 [Benincasa hispida])

HSP 1 Score: 723.0 bits (1865), Expect = 1.3e-204
Identity = 356/384 (92.71%), Postives = 368/384 (95.83%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGN--RKRSLHVAADRPFCRKKNKLSSDIKTPTSDLFDSLPD 60
           MRTRTGLSYP LQP T SS N  RKR+ +VAADRPFCRK+NKLSSD K PT+DLFDSLPD
Sbjct: 1   MRTRTGLSYPQLQPNTLSSDNHHRKRTHYVAADRPFCRKRNKLSSDTKIPTADLFDSLPD 60

Query: 61  DLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAH 120
           DL+I+ILSNLSSAASSPSDFINILLTCKRLN+LGLNPMVLSRASQKTFAIRA+NWTESAH
Sbjct: 61  DLIISILSNLSSAASSPSDFINILLTCKRLNSLGLNPMVLSRASQKTFAIRARNWTESAH 120

Query: 121 RFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSG 180
           RFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSG
Sbjct: 121 RFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSG 180

Query: 181 GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELA 240
           GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELA
Sbjct: 181 GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELA 240

Query: 241 AVLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEW 300
           AVLSSEAASSVAASRSCLTW+ HPPHHRH+TGSGCPLLSDFGCNIPAPE HPASQFLAEW
Sbjct: 241 AVLSSEAASSVAASRSCLTWSIHPPHHRHITGSGCPLLSDFGCNIPAPEVHPASQFLAEW 300

Query: 301 FEARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCA 360
           FEARGGS G+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCA
Sbjct: 301 FEARGGSPGHGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCA 360

Query: 361 PVERWLDDNGDGLDDVADDIMDES 383
           PVERWLD+NGDG  D AD IMDES
Sbjct: 361 PVERWLDENGDGGADGADVIMDES 384

[Close]

BLAST of PI0023341 vs. NCBI nr
Match: KAG7034708.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 673.3 bits (1736), Expect = 1.2e-189
Identity = 337/386 (87.31%), Postives = 349/386 (90.41%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTTFSSGNRKRSLH----VAADRPFCRKKNKLSSDIKTPTSDLFDSL 60
           MRTR GL YP LQ   FS    ++  H     AADR FCRK+NK S DIKTPTSDLFDSL
Sbjct: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHEADAAAADRQFCRKRNKPSPDIKTPTSDLFDSL 60

Query: 61  PDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTES 120
           PDDLVI+ILS LSSAASSPS+FINILLTCKRLN+LGLNP+VLSRAS K FAI A+NWTES
Sbjct: 61  PDDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNG 180
           AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDK+LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLA 300
           LAAVLSSEA SSV ASR+CLTWN H PHHRHVTGS CPLLSDFGCNIPAPEAHPASQFLA
Sbjct: 241 LAAVLSSEAGSSVTASRTCLTWNPH-PHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLA 300

Query: 301 EWFEARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD 360
           EWF ARGGS G+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD
Sbjct: 301 EWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD 360

Query: 361 CAPVERWLDDNGDGLDDVADDIMDES 383
           C PVERWLDDNGDG  D  DD+MDES
Sbjct: 361 CVPVERWLDDNGDGGADGVDDMMDES 385

[Close]

BLAST of PI0023341 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 493.8 bits (1270), Expect = 1.2e-139
Identity = 244/336 (72.62%), Postives = 278/336 (82.74%), Query Frame = 0


Query: 47  TPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTF 106
           T  +DL DS+PDDLVI+IL  L S +  P+DFIN+LLTCKRL  L +NP+VLSR S K  
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 107 AIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPAL 166
           A++A NW+E +HRFLK+C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 167 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGR 226
           YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN++EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 227 RFLVQANARELAAVLSSEAASSVAASRSCLTWNTHP----PHHRHVTGSGCPLLSDFGCN 286
           RFLVQANARELAAVLS    S + A  + L+ +  P    P+H   T   CPLLSDFGCN
Sbjct: 218 RFLVQANARELAAVLS----SGIQARSTWLSLSQPPPPVVPNHGQQT---CPLLSDFGCN 277

Query: 287 IPAPEAHPASQFLAEWFEARGGS-TGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCS 346
           +PAPE HPA++FLA+WF  RGG   G+GLRLCSH GCGRPETR+HEFRRCSVCG VNYCS
Sbjct: 278 VPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCS 337

Query: 347 RACQALDWKLRHKMDCAPVERWLDDNGDGLDDVADD 378
           RACQALDWKLRHKMDCAPV+RWL++   G  +V  D
Sbjct: 338 RACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQID 366

[Close]

BLAST of PI0023341 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 391.7 bits (1005), Expect = 6.6e-109
Identity = 199/347 (57.35%), Postives = 254/347 (73.20%), Query Frame = 0


Query: 37  KKNKLSSDIKTPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPM 96
           KK +L ++     ++ F+ L DDL+I+IL  L+++ASSPSDF+ +L TCKRLN LGL+P+
Sbjct: 6   KKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPL 65

Query: 97  VLSRASQKTFAIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAK 156
           VLS+A  +T A+ A+ W++S+H+FLK C +AGN++A Y+LGMIRFYCLQN  SGASLMAK
Sbjct: 66  VLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAK 125

Query: 157 AAICSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 216
           AAI SHAPALYSL+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGY
Sbjct: 126 AAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGY 185

Query: 217 GVRQNITEGRRFLVQANARELAAVLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLL 276
           GV ++++EGRR L+QANARELA  L           RS L+           +G     L
Sbjct: 186 GVPRDVSEGRRLLIQANARELACSL-----------RSYLSLK---------SGDENETL 245

Query: 277 SDFGCNIPAPEAHPASQFLAEWFEARGGSTGNGLRLCSHVGCGRPETRRHEFRRCSVCGA 336
           +D    +P  E HP ++FL EWF +       GLR+CSH GCGRPETR HEFRRCSVCG 
Sbjct: 246 TDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGK 305

Query: 337 VNYCSRACQALDWKLRHKMDCAPVERWL---DDNGDGLDDVADDIMD 381
           VNYCSR CQALDW+ +HK++C P++ W+    + GD  + VA +I D
Sbjct: 306 VNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of PI0023341 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 47.8 bits (112), Expect = 2.3e-05
Identity = 28/73 (38.36%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 296 AEWFEARGGSTG-----------NGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRAC 355
           A++FE  GGS G           +    CS   CG+  T     ++CS C +V YCS AC
Sbjct: 36  AKYFEVGGGSGGFDRDHRRDFMVSDTAECS--VCGKATT-----KKCSRCKSVRYCSAAC 95

Query: 356 QALDWKLRHKMDC 358
           Q  DWK  HK+ C
Sbjct: 96  QTSDWKSGHKLKC 101

[Close]

BLAST of PI0023341 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 330 RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 362
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of PI0023341 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 330 RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 362
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of PI0023341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	1.7e-138	72.62	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	9.3e-108	57.35	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	5.1e-05	30.77	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q9SJA1	3.3e-04	38.36	Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]
Q9FPS9	5.6e-04	53.13	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of PI0023341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SUQ1	2.2e-216	97.64	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002260 ...	[more]
A0A1S3BE37	6.3e-216	97.38	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103488887 PE=4 SV=1	[more]
A0A0A0KTC5	1.1e-215	97.12	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 P...	[more]
A0A6J1GZ25	7.7e-190	87.53	F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1	[more]
A0A6J1KDE5	3.6e-187	86.95	F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1	[more]

BLAST of PI0023341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034193.1	4.4e-216	97.64	F-box protein [Cucumis melo var. makuwa] >TYK15727.1 F-box protein [Cucumis melo...	[more]
XP_008446037.1	1.3e-215	97.38	PREDICTED: F-box protein At1g67340 [Cucumis melo]	[more]
XP_004135325.1	2.2e-215	97.12	F-box protein At1g67340 [Cucumis sativus] >KGN51672.1 hypothetical protein Csa_0...	[more]
XP_038893304.1	1.3e-204	92.71	F-box protein At1g67340 [Benincasa hispida]	[more]
KAG7034708.1	1.2e-189	87.31	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of PI0023341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	1.2e-139	72.62	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	6.6e-109	57.35	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	2.3e-05	38.36	ubiquitin-specific protease 19	[more]
AT1G17110.1	4.0e-05	53.13	ubiquitin-specific protease 15	[more]
AT1G17110.2	4.0e-05	53.13	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 92..253 e-value: 2.8E-18 score: 68.7
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 318..357 e-value: 8.9E-8 score: 32.1
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 315..357 score: 10.859447
None	No IPR available	GENE3D	6.10.140.2220		coord: 304..361 e-value: 9.8E-11 score: 43.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR46758:SF2	OSJNBA0044M19.1 PROTEIN	coord: 1..374
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 111..232
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 312..362
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..374
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 47..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023341.1	PI0023341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006414	translational elongation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003746	translation elongation factor activity