PI0023340 (gene) Melon (PI 482460) v1

Overview


Name	PI0023340
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 3453436 .. 3454585 (+)
RNA-Seq Expression	PI0023340
Synteny	PI0023340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGTGCTCGAATGGTATAATTTCTATCCCACAATTAAATTAAAATTGACGTGAAATTAGTCCAAAAAAGTTCAGCTCAACTTCCAAACCATTTACAAACTTTTTAAATCTCAAAGCTAAAATTCAATTTCGATACTGTTTAGTTGTTTTATTTTATTTAAGAACTATTTATGGAAATTTTGTGAAATTATATTACAAGACTAACTCGAAATTTTCTTTAACTACAAGAACTATATTCTAATTTTTAAATTTTCAAGACTAAATTTGTAATATAATGACTCAAATCTCAAAACGTTGTTTGTAATATGTCTATGTATCTCTCTATTCTGCCGTTCTTCCTCAGCTCACACCATACTCGCCACCGGCGCCTGTCGTCGCCCACCGCCGTCCATTGCAGAACCATCAACGCCCCGCTCTATACGATCCGATTCTAAAGGGAGAAACCCCAGTTGCCATAGTTTTTTTCTTATGTTTTCTTTTCACTTGTACCGCCCCACACCCTTGCTTTTGTATTGGTTTGTCGCAGCCGATCGCCACCGTCCGCCGATTTACACCTCACAAGGCTAAATTTCAAGTTTCTGTAGGGTGTTTGGTTCCGTGAGGCGAAAAGGAAAGAAGAAAAAAGGTTTTGCTCTGTACCCAGTTTTGCATTTTTTTTGTTTTGATTTTTTTAACGAGGTGGGTAATGATAGGAATGTTGTTAGAATAGAATTAGTGTATTAGGGTATGTTGTTAATTAGGTAAGGAGGGGTTTTTTTTTTTTTTTTTGGAGAGTTTTGCTATGAAGAGAGTGGGCTAGAAGGATGGAGTGAGGCATTTGATGAGTGAATTGGTGATTTAGTGAATGAATCAGGGCTTGAGGAGTATCTCAAAAGGGGTTCAGCTACCTCTAATAATTTTATTTTTATCTTCTACATTTCAATACATTTTGGTTCTGTTTTGGATTCTATCAAGGGTATCAAATGTATCTGATACTTGTACAAGTCTCCCATTGATGAAATGTTATATATTTCGTAGGAAAAGAAAGGAAAGATAGAGTTTTTGCTTGTCTGTTGTGGAATTTCCTATTTTGTTTCAGAAGATTGGTCCTTAATTGGATTGGAACCTCTCGAAAATTTTTGGATAACTCCATAGTCAATCAGTGA

mRNA sequence

ATGAAAAAGTGCTCGAATGCTCACACCATACTCGCCACCGGCGCCTGTCGTCGCCCACCGCCGTCCATTGCAGAACCATCAACGCCCCGCTCTATACGATCCGATTCTAAAGGGAGAAACCCCAGTTGCCATAGTTTTTTTCTTATGGTGTTTGGTTCCGTGAGGCGAAAAGGAAAGAAGAAAAAAGGAAAAGAAAGGAAAGATAGAGTTTTTGCTTGTCTGTTGTGGAATTTCCTATTTTGTTTCAGAAGATTGGTCCTTAATTGGATTGGAACCTCTCGAAAATTTTTGGATAACTCCATAGTCAATCAGTGA

Coding sequence (CDS)

ATGAAAAAGTGCTCGAATGCTCACACCATACTCGCCACCGGCGCCTGTCGTCGCCCACCGCCGTCCATTGCAGAACCATCAACGCCCCGCTCTATACGATCCGATTCTAAAGGGAGAAACCCCAGTTGCCATAGTTTTTTTCTTATGGTGTTTGGTTCCGTGAGGCGAAAAGGAAAGAAGAAAAAAGGAAAAGAAAGGAAAGATAGAGTTTTTGCTTGTCTGTTGTGGAATTTCCTATTTTGTTTCAGAAGATTGGTCCTTAATTGGATTGGAACCTCTCGAAAATTTTTGGATAACTCCATAGTCAATCAGTGA

Protein sequence

MKKCSNAHTILATGACRRPPPSIAEPSTPRSIRSDSKGRNPSCHSFFLMVFGSVRRKGKKKKGKERKDRVFACLLWNFLFCFRRLVLNWIGTSRKFLDNSIVNQ

Homology

The following BLAST results are available for this feature:

BLAST of PI0023340 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023340 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023340 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023340 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..16 score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023340.1	PI0023340.1	mRNA