PI0023259 (gene) Melon (PI 482460) v1

Overview


Name	PI0023259
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NADH-ubiquinone oxidoreductase chain 5
Location	chr03: 6278505 .. 6281791 (+)
RNA-Seq Expression	PI0023259
Synteny	PI0023259

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGAAGCAAACCCAAAGGAAAAGGTCCATTACAGTTTGCAAAGTCCAAAATTTTTAAGGGAATAATGGAATTTTGGGGAAGAAGAAGGCCAGGGGGGTGAAGGAGTAGTGAGAGAAGGTCCACCCAGCGCATTCCAACAAACAAACCCCCCTCAACCTGAACCACTGCGAATTGAACGCCTCATGCTCTCTCTCAATTCCATTTCACAATTCCTTGTTCGATTCGTTTGTCGCTGTCTTCATTCCTCCATTCTTCACCTTCCCTCTTCCTCCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCATCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCCTCTACCTCCAATATTACATCCTCCAGGTACCCTTCTTATTTCCCTTCTTATTTCTTTTATTTTGTTTCTTCAGATTCTTAATTTTCGCTGTTTTTTGACGTTTTCTTTTCAATTGGGTCGTTTTTCATCGATCAGCTACGCCCCTTCTGTTTTTTTTATGCTCAATTACAGGATTCGGATCATTGCACATGTTCGTTGTTGTGTCACCAATTTGTCCGAATCTGTTCTGTTTGTTTTAGGTCATTAGAATTTGAAATTTGTTAAGATCGTTTTCCGATTGTTGATTTCTTTTATACTGGGTAGTGTTGTTTAATAGAAAAGGGGAGGGATTTTGGTTCTTGAAACGGAATTCTCATAAGCATAGGTCAGGATGCATCATGTCGTCATCTCGGTTTCGAGATTTTTGCTTTGTCGGATGATGTGCTATTCTAATTGTTCAATTAAATTTCTTTACGTTTTCGAGAAGCATGGTCGCGAGTCCCTTTAGATGTAGCTTGGGAAATTTCATGTGCTTGCCTGCTTAGCATCAAATCCTATGCCTATATTCCTTTGATCGCCAGAGGGACGTTTGTGCTATGATCAATGAGTTCCTCTTCAATCCACCTGGAGGGTATGTGTACGATCTTGTGGGTTTTGTGGGGTGAGCGGAATGGTAGGATCGTAGAGGGGTGGAGAAGGACTCTAGCAAGGTTTATTCCCTTCGTTTTCATGTTTCCTTGTGGGCTTCAATTTCGAAGACCTGTTGCAATTATCCTTAGGTGTTATTTTGCTTAGTTGGAGCTCCTTATAGAATTGTGCCTTCTTTGTGGGCTGGGTTATTTGTATGCCCATATATTCATTCGTTCTTTTTTAATGAAAGCTGTTTTTTCTATATAGGAAAAAACCTCGATGGTTATTTTATGTGACGGGATATTGAAAGATACCCATGATGGTGGAAATGAATAAGATTATAAATTTATAATTATCAGTTGATAAAGTTCTGTCTTTTTATCTTGCCTTGATTGCTAATTGCACTGCACTCGAGGAAAATATTTTGGAAATTGCACCATAAAATCTTCAATCAGGACTTTTGTTCTCCAAAAGAAAAAGGAAAACCACATGTATTTCTGTTTTAGCTTCCTATTATGTATCACTACACTAGCGAGTGAAGTTCTACTTTCAAATAACAAGGTCTTGAGAATACGTTTTCTTGTTTGCAATTGTTAATTTTTCTAGTGTAAATTGGGAAAATAACTTTTTATATTTTCTTAGCACCATGTTAGATCAATGTCATTTGCTTGTTTTAGGTTCAAAAGAATGTCATTTCAGTGCATAAAATTGGAAGTTGGAAGTGCAAGATTATGTATGATAGGTGATTGATAGGAACTTAATTTGCATTTTTGCTTTGAACTAGTTCATTATTGATTAAGAACTTTTACTTATGCCAACCGATACATCTTTTCATCTTATGAGGCAATATACCCAATTAGATATCGGCAGGCTTGACTTTGTGCTACTGTCCATATCAAAAGAATAACACATTCGCCTTTTACTGATTTTGTCCTTGTCAAAAGAGCGACGATTGAGGAGTTCCTTCTCCATCTGCCTTTCAGTGATAAGGTGGCTTTTTATAGCGTGCACAGGTGCGCGCTATTATTTGGGATATTTGGGATGAGAGGAATGATAGGGTGTTTAGGGGTAGAAAGAGTGGGCATAATGAGATCTGGTCTTTGGTTAGATTTCACGTGTCTCTGTGGGCTTTGGTTTCGAAGAACTTTTGTAACTATTCTATAGGCAACATTTTACTTAGTTGGTCCCCCTTCCTTTAAAAGGGTGATTTTGTGGGCTGCTTTTTTTTTATGTCCTTGTGTTCTTTCATTCTTTCTCAATGAAAGTTGTTTTCGTAAAAAAAAATAAAAAATAAAAAATAACATTCTTTGATCGAAACAAATTACTTTGATCAAGAAGAAAATGAAAGAATACTGAGGCACATAAGGAGAAAAAATCAAGCCCACAAAAACCCTATTAAAGAAAGAAAAAGGATCAACTAAGTAAAATGTTGTCTAAAGAATAATTAGAAAAGATCCTCAAAGTTAAAGTCCAACAAGAAACACGAAACCTAACTAAGAACTAAATTCCACCAAGGGCCCTCTCCACATCCCTAGACACTGATATTTCTCTCACCCCAAAGATCTCATAAGAAAGCAAACACATACCCCACCAATCCATAAAAAAGTCTTTCTTTCTCACTAAAAGGCGGATCGAGGAGGAATGTCCCTAACACATTCTTTATTGAACGGTTTATGTATGATTGGATTCTCGCTTCTGTTAGCAAGAACAGTGAATTATCTGTCTGTGACGGTAATCAATGTGATCTGACTTCTAATGTGAATTTTGGTTGATGTTGTTTTGGATGCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATACTATCGTTCTTGGTGTTTTCGGCAGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATCACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGAAAATCTCATAGTAGAAGGAGAGTTATACTAAACCTTTTTTTCTCTTTTTTTCTTTTTCTTTTTTTAATGTTCTAAATTCCCTGAATTATATTCACAAAAAATTAGATTTGGTCCTTTCTCTTTCCCCACTACTTTTTGTTATATCCTGATCTGTAATCACCAGGAAAGCAGGTTTATCCCAACAAAAAAGAAAAGAAAAAAGAATGAGATGAATGTAATCAGTTTAGAAATTTATTTGTGAATGCTTTTTTTATCTGTGAGTTTGGATCATCTTCCCCA

mRNA sequence

CCTGAAGCAAACCCAAAGGAAAAGGTCCATTACAGTTTGCAAAGTCCAAAATTTTTAAGGGAATAATGGAATTTTGGGGAAGAAGAAGGCCAGGGGGGTGAAGGAGTAGTGAGAGAAGGTCCACCCAGCGCATTCCAACAAACAAACCCCCCTCAACCTGAACCACTGCGAATTGAACGCCTCATGCTCTCTCTCAATTCCATTTCACAATTCCTTGTTCGATTCGTTTGTCGCTGTCTTCATTCCTCCATTCTTCACCTTCCCTCTTCCTCCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCATCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCCTCTACCTCCAATATTACATCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATACTATCGTTCTTGGTGTTTTCGGCAGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATCACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGAAAATCTCATAGTAGAAGGAGAGTTATACTAAACCTTTTTTTCTCTTTTTTTCTTTTTCTTTTTTTAATGTTCTAAATTCCCTGAATTATATTCACAAAAAATTAGATTTGGTCCTTTCTCTTTCCCCACTACTTTTTGTTATATCCTGATCTGTAATCACCAGGAAAGCAGGTTTATCCCAACAAAAAAGAAAAGAAAAAAGAATGAGATGAATGTAATCAGTTTAGAAATTTATTTGTGAATGCTTTTTTTATCTGTGAGTTTGGATCATCTTCCCCA

Coding sequence (CDS)

ATGCTCTCTCTCAATTCCATTTCACAATTCCTTGTTCGATTCGTTTGTCGCTGTCTTCATTCCTCCATTCTTCACCTTCCCTCTTCCTCCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCATCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCCTCTACCTCCAATATTACATCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATACTATCGTTCTTGGTGTTTTCGGCAGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATCACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA

Protein sequence

MLSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

Homology

[Close]

BLAST of PI0023259 vs. ExPASy TrEMBL
Match: A0A0A0KIH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358690 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.1e-66
Identity = 146/150 (97.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MLSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQI 60
           MLSLNSISQFLV F+CRC HSSILHLPSSSLEAKKRRSRGS+SAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of PI0023259 vs. ExPASy TrEMBL
Match: A0A1S3CMK7 (uncharacterized protein LOC103502637 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502637 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65
Identity = 146/150 (97.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MLSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQI 60
           MLSLNSISQFLVRF+CRC  SSILHLPSSSLEAKKRRSRGS+SAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of PI0023259 vs. ExPASy TrEMBL
Match: A0A6J1GHS6 (uncharacterized protein LOC111454282 OS=Cucurbita moschata OX=3662 GN=LOC111454282 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.9e-52
Identity = 127/149 (85.23%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 2   LSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQIR 61
           LSLNSISQFL+ FV  C  SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIR
Sbjct: 20  LSLNSISQFLLHFVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIR 79

Query: 62  SKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT 121
           SKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLA ILVCIT
Sbjct: 80  SKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCIT 139

Query: 122 MLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           MLLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 140 MLLLICMKVTKQVRLARKKKRRMLLPLSM 166

[Close]

BLAST of PI0023259 vs. ExPASy TrEMBL
Match: A0A6J1G568 (uncharacterized protein LOC111450786 OS=Cucurbita moschata OX=3662 GN=LOC111450786 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.6e-50
Identity = 123/150 (82.00%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MLSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQI 60
           MLSLNSISQFLV F+C C+   ILH   S    +K  SRG  +AMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQI 60

Query: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120
           RSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQL F+LVCI
Sbjct: 61  RSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCI 120

Query: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           TMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 121 TMLLIVCMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of PI0023259 vs. ExPASy TrEMBL
Match: A0A6J1KBR2 (uncharacterized protein LOC111494024 OS=Cucurbita maxima OX=3661 GN=LOC111494024 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 6.1e-50
Identity = 121/150 (80.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 1   MLSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQI 60
           MLSLNSISQFLV F+C C+   I H   S    +K  SRG  +AMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPIFHRRPS----EKPTSRG--AAMITRSNLVEQLREYQI 60

Query: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120
           RSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQL F+L+CI
Sbjct: 61  RSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLICI 120

Query: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           TMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 121 TMLLIVCMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of PI0023259 vs. NCBI nr
Match: XP_004144225.1 (uncharacterized protein LOC101213289 [Cucumis sativus] >KGN47556.1 hypothetical protein Csa_018918 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 146/150 (97.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MLSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQI 60
           MLSLNSISQFLV F+CRC HSSILHLPSSSLEAKKRRSRGS+SAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of PI0023259 vs. NCBI nr
Match: XP_008464874.1 (PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo])

HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65
Identity = 146/150 (97.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MLSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQI 60
           MLSLNSISQFLVRF+CRC  SSILHLPSSSLEAKKRRSRGS+SAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of PI0023259 vs. NCBI nr
Match: XP_038884232.1 (uncharacterized protein LOC120075129 [Benincasa hispida])

HSP 1 Score: 244.6 bits (623), Expect = 5.5e-61
Identity = 142/150 (94.67%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MLSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQI 60
           MLSLNSISQFLVRFVCRC+ SSILH   SSLEAKKR+SRG  SAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVRFVCRCVKSSILHPRPSSLEAKKRKSRG--SAMITRSNLVEQLREYQI 60

Query: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 148

[Close]

BLAST of PI0023259 vs. NCBI nr
Match: XP_022951473.1 (uncharacterized protein LOC111454282 [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 6.1e-52
Identity = 127/149 (85.23%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 2   LSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQIR 61
           LSLNSISQFL+ FV  C  SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIR
Sbjct: 20  LSLNSISQFLLHFVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIR 79

Query: 62  SKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT 121
           SKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLA ILVCIT
Sbjct: 80  SKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCIT 139

Query: 122 MLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           MLLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 140 MLLLICMKVTKQVRLARKKKRRMLLPLSM 166

[Close]

BLAST of PI0023259 vs. NCBI nr
Match: KAG7020712.1 (hypothetical protein SDJN02_17399 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-51
Identity = 126/149 (84.56%), Postives = 132/149 (88.59%), Query Frame = 0


Query: 2   LSLNSISQFLVRFVCRCLHSSILHLPSSSLEAKKRRSRGSSSAMITRSNLVEQLREYQIR 61
           LSLNSISQFL+  V  C  SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQIR
Sbjct: 24  LSLNSISQFLLHIVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQIR 83

Query: 62  SKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT 121
           SKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLA ILVCIT
Sbjct: 84  SKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCIT 143

Query: 122 MLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           MLLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 144 MLLLICMKVTKQVRLARKKKRRMLLPLSM 170

[Close]

BLAST of PI0023259 vs. TAIR 10
Match: AT1G20460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76185.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-42
Identity = 92/106 (86.79%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 45  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAV 104
           MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL+IL+F VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVILAFFVFSAV 60

Query: 105 SLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           SLYF+ +QLAFILVC+T+LLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 61  SLYFKRLQLAFILVCVTLLLLICMKVTKQVRLARKKKRRMLLPLSM 106

[Close]

BLAST of PI0023259 vs. TAIR 10
Match: AT1G76185.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20460.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 164.9 bits (416), Expect = 5.1e-41
Identity = 89/106 (83.96%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 45  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAV 104
           MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL++L+ +VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVMLALVVFSAV 60

Query: 105 SLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM 151
           SLYFR +QLAFIL+C+T+LLLLCMK+TKQVR ARKKKRRMLLPLSM
Sbjct: 61  SLYFRRLQLAFILLCVTLLLLLCMKITKQVRHARKKKRRMLLPLSM 106

The following BLAST results are available for this feature:

BLAST of PI0023259 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023259 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIH9	6.1e-66	97.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358690 PE=4 SV=1	[more]
A0A1S3CMK7	1.0e-65	97.33	uncharacterized protein LOC103502637 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GHS6	2.9e-52	85.23	uncharacterized protein LOC111454282 OS=Cucurbita moschata OX=3662 GN=LOC1114542...	[more]
A0A6J1G568	1.6e-50	82.00	uncharacterized protein LOC111450786 OS=Cucurbita moschata OX=3662 GN=LOC1114507...	[more]
A0A6J1KBR2	6.1e-50	80.67	uncharacterized protein LOC111494024 OS=Cucurbita maxima OX=3661 GN=LOC111494024...	[more]

BLAST of PI0023259 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144225.1	1.3e-65	97.33	uncharacterized protein LOC101213289 [Cucumis sativus] >KGN47556.1 hypothetical ...	[more]
XP_008464874.1	2.2e-65	97.33	PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]	[more]
XP_038884232.1	5.5e-61	94.67	uncharacterized protein LOC120075129 [Benincasa hispida]	[more]
XP_022951473.1	6.1e-52	85.23	uncharacterized protein LOC111454282 [Cucurbita moschata]	[more]
KAG7020712.1	3.0e-51	84.56	hypothetical protein SDJN02_17399 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of PI0023259 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20460.1	1.2e-42	86.79	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G76185.1	5.1e-41	83.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34936:SF10	SUBFAMILY NOT NAMED	coord: 45..150
None	No IPR available	PANTHER	PTHR34936	EXPRESSED PROTEIN	coord: 45..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023259.1	PI0023259.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane