PI0023220 (gene) Melon (PI 482460) v1

Overview


Name	PI0023220
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protein LATERAL ROOT PRIMORDIUM 1
Location	chr10: 21992399 .. 21995713 (+)
RNA-Seq Expression	PI0023220
Synteny	PI0023220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAGCCAAATACATTATATATTTATTATATTTATAGTTATTCCCTTTCTTCCTCACAAACCTAAAATAAACTTTGTCACACCACAGTTTCAAGAATCATTCATTCCAATTTCCATTTTCCAATTTCCAATTTCCATTTCCATTTCCTTTTCCATTCCACTCATCTTCATCTTCATCTTCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCATCTTCATCATCATCATCAACATCATCATCTACTTCTTCTTCTTCTTCCTTGATCTCATCTCATCAGTCATCTGTTACTGTGAAATGAGACAGAATTCCACTTCATTACACACAATTGCTTTTGCTCTAATAAAATTTTCTTCTTTTTCCCAGCACTGCATAATCCCCACATCCCATAACAACTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATTTCATCATAAACACACCCTCTTGGCTCTTTCTATCTCAACCTCTCTTCTTCTAATTTCATCTCATCACCTTTTTTTTTTTTTTTTGAGCTTTTTTTCAATCAACAAAATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACGCCCTCTTCTCTTCACCAGCAGACCCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTCCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGCCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGATAATCTTAAGAGAACCCAAGATTTTGGCTTTGGAAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGACGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTACCAGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCCGCTTCCACTTCCAATGCCACCACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAGGGTAAATCTCTCTTCAACTCTTTCTTTTCATTCTTCCGTTTTTGTTTTCTTGTGCTTCTCAATGAATTCAGAATCATGAGCAGCAATAACGGGATATCTGTTTACTCTGTTTCTATCTGGTTAATGATTTGGTTACTTGTTTCTTCGTATATAATGTTAGATTACTAGAAATGTATTCTTATTCAGTCTCAAATTCGTTAGATTTTTATGAGTAGTTTTTATTTTAGTTCTCTTTAAAGATCTTGCAGCAAATTTAACGAAACATGTTCATTAGGTATGTTGTTGGAAAACTTACAATCCTTTCATGTCATAACTCTGTTTTTCTCTTACTTCTCTCTCTCCTTTCTCCAACAAGGAGGGAGTGACTTATATATAAAAGTCGAATTTAGGACCGCTTGTAAATGACATTTCGAGTGCTTAAAAGATAAGGTTTTTTTTTTCTTTTTTTTTAAGTGTTTGTGTTTAGAAAGGAGTTTAGGTATTAAAAAAGGGGTTTAAGTGTTTAGAAAGTCATTCCAAACAGGCTTTGTGCTGTTAAAACATGCACATATATATGTATTCTAACTGTGTTTTTTTAACAAGATCATTTTCTAAACCCACCTCTTGGAATTCTCATGACTTTGAAACCAGATGCAAGCTTCAAAAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTTCTTTATGATCAAGGAGCTGATGACAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAGACATTCCTTCTCTTCATTCTTCTCCAATTCTTCCTCTGTTCACTCCTCCTGAAAACTCGGTCTCGACCACTTGAAAAATATGATATCTCTGCTAGATTTCCGAGGTCTGTTATGTTATCTGTAAGTTTTATATTGTTGTTATCATGGTGGTACTACAATGAATCTTGCACTAAATAGAACACGAAAGTGCATAGTTGTAATAGAAATTTTCTGTTCTATAGTTGTTCTAGCCATAAGCTAGGTTTAGTGTAAGATTTATCAAGTTCAAAGATAGTTGGATATTGATCTTCTGTATATGCTTAGAAGATGTGTAACTTTCATCTATCCAAATATCTGCTGAAACAAGTTAGCTTGTCTTATTTCATAGCAGCTGTATTATATGTTGGGATACAAGAGTTTAATCTCTTATTTTACTGTCTATCTCAAAAGTTTTACAAAACAAATGAAATCGTTCATCTGAGTATGTTCTTGCGAAATGCCACGATGGTGGAACAGGCAAAATGTATGTAATGCTTCCTCTTTCTACATTACTATCATTTGTCTTCATCTTTGAACATTTTCAGTGATTTGGATCTTCTCCCATTATGAGAGGGGTTTTATTAAATGAAAGTCATTTATTTGATTGAGACGAGTTTGATGGTGAATATGTAGGGAAAACCTGAATAAGTAAAGTCGGACCCCACATGCACGAACAATATAAGCAGAAGATGAAAGTAAGTGAAGTGTAGTTCCATTTTCATCACATTTTTAGCAAAAAACGAAAGCAGAGCAATGGAGATGAACACTAAAAACTGAAAAGTGGGAAGAAAGAGCAAAGCAGTGTAAGAATTACCAAAATTTGAAAAGAGTTGAAAGAAAAAAAGAAGCATTGATGATTGATGGAGAAGAGAAAAGGATGAATATGAGAACAGTATCAATTGGGACTCAGTTGTTAAAGGAGAGGGATTTGCTTCTTCCCAGATGACATTAACAAAAAGGTATGCATTAAAAGGGATGAACAAAATGAATAGGTGAGACCAATACCCCCCACCCCCTTTTTGTCTTTTCATATAGGAATTGTTAGGCCTAAGTGTATGTGTAGGAGATTGAATCCAATTACATATCATTGCAAATGCCAAAAACAGATGTGACAAAGCAGTGGTATGGCAAAAACATACATTTTTATTATAAAGATTACGGGGTTTCAACTTGAATATATATGCTTTTGTAGGAAGGAAAAAA

mRNA sequence

CCAAAGCCAAATACATTATATATTTATTATATTTATAGTTATTCCCTTTCTTCCTCACAAACCTAAAATAAACTTTGTCACACCACAGTTTCAAGAATCATTCATTCCAATTTCCATTTTCCAATTTCCAATTTCCATTTCCATTTCCTTTTCCATTCCACTCATCTTCATCTTCATCTTCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTCATCTTCATCATCATCATCAACATCATCATCTACTTCTTCTTCTTCTTCCTTGATCTCATCTCATCAGTCATCTGTTACTGTGAAATGAGACAGAATTCCACTTCATTACACACAATTGCTTTTGCTCTAATAAAATTTTCTTCTTTTTCCCAGCACTGCATAATCCCCACATCCCATAACAACTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATTTCATCATAAACACACCCTCTTGGCTCTTTCTATCTCAACCTCTCTTCTTCTAATTTCATCTCATCACCTTTTTTTTTTTTTTTTGAGCTTTTTTTCAATCAACAAAATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACGCCCTCTTCTCTTCACCAGCAGACCCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTCCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGCCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGATAATCTTAAGAGAACCCAAGATTTTGGCTTTGGAAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGACGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTACCAGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCCGCTTCCACTTCCAATGCCACCACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAGGATGCAAGCTTCAAAAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTTCTTTATGATCAAGGAGCTGATGACAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAGACATTCCTTCTCTTCATTCTTCTCCAATTCTTCCTCTGTTCACTCCTCCTGAAAACTCGGTCTCGACCACTTGAAAAATATGATATCTCTGCTAGATTTCCGAGGTCTGTTATGTTATCTGTAAGTTTTATATTGTTGTTATCATGGTGGTACTACAATGAATCTTGCACTAAATAGAACACGAAAGTGCATAGTTGTAATAGAAATTTTCTGTTCTATAGTTGTTCTAGCCATAAGCTAGGTTTAGTGTAAGATTTATCAAGTTCAAAGATAGTTGGATATTGATCTTCTGTATATGCTTAGAAGATGTGTAACTTTCATCTATCCAAATATCTGCTGAAACAAGTTAGCTTGTCTTATTTCATAGCAGCTGTATTATATGTTGGGATACAAGAGTTTAATCTCTTATTTTACTGTCTATCTCAAAAGTTTTACAAAACAAATGAAATCGTTCATCTGAGTATGTTCTTGCGAAATGCCACGATGGTGGAACAGGCAAAATGTATGTAATGCTTCCTCTTTCTACATTACTATCATTTGTCTTCATCTTTGAACATTTTCAGTGATTTGGATCTTCTCCCATTATGAGAGGGGTTTTATTAAATGAAAGTCATTTATTTGATTGAGACGAGTTTGATGGTGAATATGTAGGGAAAACCTGAATAAGTAAAGTCGGACCCCACATGCACGAACAATATAAGCAGAAGATGAAAGTAAGTGAAGTGTAGTTCCATTTTCATCACATTTTTAGCAAAAAACGAAAGCAGAGCAATGGAGATGAACACTAAAAACTGAAAAGTGGGAAGAAAGAGCAAAGCAGTGTAAGAATTACCAAAATTTGAAAAGAGTTGAAAGAAAAAAAGAAGCATTGATGATTGATGGAGAAGAGAAAAGGATGAATATGAGAACAGTATCAATTGGGACTCAGTTGTTAAAGGAGAGGGATTTGCTTCTTCCCAGATGACATTAACAAAAAGGTATGCATTAAAAGGGATGAACAAAATGAATAGGTGAGACCAATACCCCCCACCCCCTTTTTGTCTTTTCATATAGGAATTGTTAGGCCTAAGTGTATGTGTAGGAGATTGAATCCAATTACATATCATTGCAAATGCCAAAAACAGATGTGACAAAGCAGTGGTATGGCAAAAACATACATTTTTATTATAAAGATTACGGGGTTTCAACTTGAATATATATGCTTTTGTAGGAAGGAAAAAA

Coding sequence (CDS)

ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACGCCCTCTTCTCTTCACCAGCAGACCCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTCCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGCCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGATAATCTTAAGAGAACCCAAGATTTTGGCTTTGGAAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGACGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTACCAGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCCGCTTCCACTTCCAATGCCACCACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAGGATGCAAGCTTCAAAAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTTCTTTATGATCAAGGAGCTGATGACAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAGACATTCCTTCTCTTCATTCTTCTCCAATTCTTCCTCTGTTCACTCCTCCTGA

Protein sequence

MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKMHSHLFHISIWTVVTTTGNRHSFSSFFSNSSSVHSS

Homology

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BLAST of PI0023220 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.5e-50
Identity = 132/291 (45.36%), Postives = 167/291 (57.39%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKS 240
           A+   GSS S+S+G K+PR++   Q     A + TS + T P+SFET+SS QD    +++
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREA 242

Query: 241 LPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
            PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K
Sbjct: 243 WPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPK 273

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BLAST of PI0023220 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-31
Identity = 81/169 (47.93%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 120 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 179
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 180 GGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVR 239
           GG SGS  AG       IP +        ++S++  P S        +ASF    PG V 
Sbjct: 154 GGGSGSGGAGGGGSS--IPKRHRDPTLPGTSSSSRLP-SHSAGLEMGEASF----PGEVS 213

Query: 240 APAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGADDKMHS 288
           + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +    S
Sbjct: 214 SDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSYMS 251

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BLAST of PI0023220 vs. ExPASy Swiss-Prot
Match: Q9M2U4 (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.2e-29
Identity = 74/165 (44.85%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 119 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 178
           VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 179 DGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHV 238
                 SSS   ++ ++ I  QS+   +              TT+S Q+  F++ LPG +
Sbjct: 100 -----SSSSPSERKKKLKIDKQSSPNVSL-----------LPTTTSRQERGFREGLPGKI 159

Query: 239 RAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGAD 283
            APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G D
Sbjct: 160 EAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVD 172

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BLAST of PI0023220 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-28
Identity = 99/267 (37.08%), Postives = 130/267 (48.69%), Query Frame = 0


Query: 18  HQQTQII--SSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRT 77
           H Q +I+     H   L L SS A G+ VG                 P+NH   D++   
Sbjct: 75  HNQQEIMFQHQQHQQRLDLYSSAA-GLGVG-----------------PSNHNQFDIS--- 134

Query: 78  RTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVK-GDAGDGSMAV-CRDCGNRAKKECEY 137
                           GE+  AG G   +   ++ G +G GS  V C+DCGN+AKK+C +
Sbjct: 135 ----------------GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSH 194

Query: 138 RRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRP 197
            RCRTCCK RG  CSTHV+STWVPAA+RRERQ  +      T    G S        KR 
Sbjct: 195 MRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV------PKRH 254

Query: 198 RVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAIS 257
           R  +P+ S++       S+          S  +  +F    P  V + AVFRC RV+++ 
Sbjct: 255 RENLPATSSSLVCTRIPSH----------SGLEVGNF----PAEVSSSAVFRCVRVSSVE 284

Query: 258 SGEGELAYQATVNIGGHVFKGFLYDQG 281
            GE E AYQ  V+IGGH+FKG LYD G
Sbjct: 315 DGEEEFAYQTAVSIGGHIFKGILYDLG 284

[Close]

BLAST of PI0023220 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.3e-27
Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 0


Query: 86  DFGFGKGES-----LIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 145
           D G G G S     + AG         V   +G G ++ C+DCGN+AKK+C++ RCRTCC
Sbjct: 91  DVGLGVGPSRSGFDISAGDHEASRSGFVMMRSGGGGIS-CQDCGNQAKKDCQHMRCRTCC 150

Query: 146 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 205
           K RG  C THVKSTWVPAA+RRERQ  +           G ++ +++   KR R     +
Sbjct: 151 KSRGFQCQTHVKSTWVPAAKRRERQQQL---AALQQQQQGHNNNNNNHKNKRQR-----E 210

Query: 206 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 265
             +A++  ST   +     E              P  VR  AVF+C ++++I   E +LA
Sbjct: 211 DPSASSLVSTRLPSNTNGLEV----------GKFPSKVRTSAVFQCIQMSSIEDDEDQLA 270

Query: 266 YQATVNIGGHVFKGFLYDQGADDKMHS 288
           YQA V+IGGHVFKG LYDQG + + ++
Sbjct: 271 YQAAVSIGGHVFKGILYDQGHESQYNN 278

[Close]

BLAST of PI0023220 vs. ExPASy TrEMBL
Match: A0A0A0KWX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.5e-157
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
           PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 284

[Close]

BLAST of PI0023220 vs. ExPASy TrEMBL
Match: A0A1S3BFS5 (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.6e-156
Identity = 283/284 (99.65%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
           PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 284

[Close]

BLAST of PI0023220 vs. ExPASy TrEMBL
Match: A0A5D3CCT8 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G003120 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.2e-153
Identity = 283/300 (94.33%), Postives = 283/300 (94.33%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ-------------- 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDQFLNPPLGILMTL 240

Query: 241 --DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
             DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

[Close]

BLAST of PI0023220 vs. ExPASy TrEMBL
Match: A0A6J1GXY1 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458506 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 5.2e-131
Identity = 246/284 (86.62%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPP N  PD+++DR+R+ +NLKRTQDFGFGKG+SLI G GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPP-NQMPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRP+VLIPSQ+ AAAAAASTSNATTPRSFETTSSHQDASFKKSLPG V+A
Sbjct: 181 GSSGSSSAGAKRPKVLIPSQTTAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVQA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
           PAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD K
Sbjct: 241 PAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVK 276

[Close]

BLAST of PI0023220 vs. ExPASy TrEMBL
Match: A0A6J1CEG6 (protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.7e-129
Identity = 254/290 (87.59%), Postives = 262/290 (90.34%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64

Query: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAV 120
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG GNN  DE V+GDAGD SM V
Sbjct: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124

Query: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184

Query: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSL 240
           GGSSGSSSAGAKRPRVLIPSQS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSL
Sbjct: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQDASFKKSL 244

Query: 241 PGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
           PG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDK
Sbjct: 245 PGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGIDDK 290

[Close]

BLAST of PI0023220 vs. NCBI nr
Match: XP_004142483.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical protein Csa_008495 [Cucumis sativus])

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
           PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 284

[Close]

BLAST of PI0023220 vs. NCBI nr
Match: XP_008446964.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 562.0 bits (1447), Expect = 3.3e-156
Identity = 283/284 (99.65%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
           PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 284

[Close]

BLAST of PI0023220 vs. NCBI nr
Match: KAA0034761.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa])

HSP 1 Score: 551.6 bits (1420), Expect = 4.5e-153
Identity = 283/300 (94.33%), Postives = 283/300 (94.33%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ-------------- 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDQFLNPPLGILMTL 240

Query: 241 --DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
             DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

[Close]

BLAST of PI0023220 vs. NCBI nr
Match: XP_038892899.1 (protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida])

HSP 1 Score: 518.1 bits (1333), Expect = 5.5e-143
Identity = 265/284 (93.31%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLL ATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLTATPCLPPPQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           P P N T DDVTDR+R+ +NLKRTQDFGFGKG+SL+ G GNN SDE VKGDAGDGSMAVC
Sbjct: 61  PLP-NQTADDVTDRSRSLENLKRTQDFGFGKGDSLMGGAGNNVSDEQVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRPRVLIPSQS AAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSTAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
           PAVFRCHRVTAI+SGEGELAYQATVNIGGHVFKGFLYDQGADDK
Sbjct: 241 PAVFRCHRVTAINSGEGELAYQATVNIGGHVFKGFLYDQGADDK 283

[Close]

BLAST of PI0023220 vs. NCBI nr
Match: XP_022956997.1 (protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata])

HSP 1 Score: 477.2 bits (1227), Expect = 1.1e-130
Identity = 246/284 (86.62%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPP N  PD+++DR+R+ +NLKRTQDFGFGKG+SLI G GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPP-NQMPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240
           GSSGSSSAGAKRP+VLIPSQ+ AAAAAASTSNATTPRSFETTSSHQDASFKKSLPG V+A
Sbjct: 181 GSSGSSSAGAKRPKVLIPSQTTAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVQA 240

Query: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
           PAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD K
Sbjct: 241 PAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVK 276

[Close]

BLAST of PI0023220 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-51
Identity = 132/291 (45.36%), Postives = 167/291 (57.39%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKS 240
           A+   GSS S+S+G K+PR++   Q     A + TS + T P+SFET+SS QD    +++
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREA 242

Query: 241 LPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
            PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K
Sbjct: 243 WPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPK 273

[Close]

BLAST of PI0023220 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-51
Identity = 132/291 (45.36%), Postives = 167/291 (57.39%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKS 240
           A+   GSS S+S+G K+PR++   Q     A + TS + T P+SFET+SS QD    +++
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREA 242

Query: 241 LPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
            PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K
Sbjct: 243 WPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPK 273

[Close]

BLAST of PI0023220 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-51
Identity = 132/291 (45.36%), Postives = 167/291 (57.39%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 90  MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 149

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 150 TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 209

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 210 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 269

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKS 240
           A+   GSS S+S+G K+PR++   Q     A + TS + T P+SFET+SS QD    +++
Sbjct: 270 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREA 329

Query: 241 LPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 285
            PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K
Sbjct: 330 WPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPK 360

[Close]

BLAST of PI0023220 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-32
Identity = 81/169 (47.93%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 120 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 179
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 180 GGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVR 239
           GG SGS  AG       IP +        ++S++  P S        +ASF    PG V 
Sbjct: 154 GGGSGSGGAGGGGSS--IPKRHRDPTLPGTSSSSRLP-SHSAGLEMGEASF----PGEVS 213

Query: 240 APAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGADDKMHS 288
           + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +    S
Sbjct: 214 SDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSYMS 251

[Close]

BLAST of PI0023220 vs. TAIR 10
Match: AT5G12330.3 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-30
Identity = 100/240 (41.67%), Postives = 128/240 (53.33%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATT-PRSFETTSSHQDASFKKSL 235
           A+   GSS S+S+G K+PR++   Q     A + TS + T P+SFET+SS Q  SF  SL
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQ-GSFTFSL 221

The following BLAST results are available for this feature:

BLAST of PI0023220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	2.5e-50	45.36	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
O65517	2.0e-31	47.93	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9M2U4	7.2e-29	44.85	Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1	[more]
Q9SD40	1.6e-28	37.08	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
K4B6C9	2.3e-27	39.13	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]

BLAST of PI0023220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWX6	5.5e-157	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1	[more]
A0A1S3BFS5	1.6e-156	99.65	protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 S...	[more]
A0A5D3CCT8	2.2e-153	94.33	Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1GXY1	5.2e-131	86.62	protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1CEG6	3.7e-129	87.59	protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988...	[more]

BLAST of PI0023220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142483.1	1.1e-156	100.00	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical pro...	[more]
XP_008446964.1	3.3e-156	99.65	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]	[more]
KAA0034761.1	4.5e-153	94.33	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein...	[more]
XP_038892899.1	5.5e-143	93.31	protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]	[more]
XP_022956997.1	1.1e-130	86.62	protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata]	[more]

BLAST of PI0023220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12330.2	1.8e-51	45.36	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.1	1.8e-51	45.36	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.4	1.8e-51	45.36	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	1.4e-32	47.93	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.3	3.0e-30	41.67	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 119..161 e-value: 1.5E-24 score: 83.7
None	No IPR available	PFAM	PF05142	DUF702	coord: 118..282 e-value: 4.1E-57 score: 192.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..231
None	No IPR available	PANTHER	PTHR31604:SF28	PROTEIN SHI RELATED SEQUENCE 6	coord: 1..315
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 234..280 e-value: 3.7E-26 score: 88.8
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023220.1	PI0023220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding