PI0023112 (gene) Melon (PI 482460) v1

Overview


Name	PI0023112
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Zinc finger CCHC domain-containing protein 10
Location	chr11: 27791703 .. 27793351 (+)
RNA-Seq Expression	PI0023112
Synteny	PI0023112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGATTTGCTACGAACTGGATTTTGCTTAATCTTCAAACCCTAAGGAAGGTATGTACCAACTACTATCGATTGATTTTCAAGCTTTGATAGCTGCAAACATTGCCTAACTTCACTCCATCTTTCGGATTTTCCCTTTTTCCTTACGAACCAGATCGGTGTTCTATTCCGACTGCGATTTGTTAATAAGAAACATTAGATTTTGTTGTGATTATGTTGTTTTAAGCTATAATTTTCTCTCATTTTATTCTAATTCCTTCCCTCTTACTGTAACTATTGGAAACCCTAAATTGCTCCTTGCTCTTTTCTTGGTCTTTTTTGTGTTCTTTACTTTTTTTTTGTACGATTTATCTGCTCGTAATCTGGGATTTTTTTCTTATGATCCTATTCTTCCAATTTATCTTCCACCCGGGTATTTATTTATATTTAGATGGTGAAGTCATAGAATGATTTGTAAGAAGGAAACCTGATAGTTCTTGATTCGTTTTTCTCGTAATGTCTGTTTGCTCTTAATTCTGGTAATTCGTCGCGACCCTATTCTTCAGTTTCTGATTGTTCGTCGTGTGTTTGGATTCAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCCGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCGGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGAGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGGGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAACGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTCAAAAATCCGAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGAAGAAGCCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGGTAGCGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGGTCCTCCTCGGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCGTCAGAATCAGAGTGTGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGGAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCGAGGTCTGAATCAGAATCTGATTCCGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAAACGCTAGTTAAGGTGGATCGAGTGAAGCGGATTAGAATTGTCAATAAATCATGGCAATTGTAGTCAGTTTAGAGATTTGAGTTTCATTCAGTTTCTTGTTTGGGAAGATCTGAAGTTTGGGGTTTCTTTTTTGAGTTTAGCAACTTCTTCCCTTCCTTTGTTCTCTTCTTAGCTCTTATGAATGTATAAATTGTTGTTTATGCTTTACTTTTATAACTGTTATGTTTACAGATGTTGGTTCTTGAATAAATTTTGGTTAATGCTTTA

mRNA sequence

CGAGATTTGCTACGAACTGGATTTTGCTTAATCTTCAAACCCTAAGGAAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCCGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCGGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGAGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGGGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAACGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTCAAAAATCCGAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGAAGAAGCCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGGTAGCGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGGTCCTCCTCGGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCGTCAGAATCAGAGTGTGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGGAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCGAGGTCTGAATCAGAATCTGATTCCGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAAACGCTAGTTAAGGTGGATCGAGTGAAGCGGATTAGAATTGTCAATAAATCATGGCAATTGTAGTCAGTTTAGAGATTTGAGTTTCATTCAGTTTCTTGTTTGGGAAGATCTGAAGTTTGGGGTTTCTTTTTTGAGTTTAGCAACTTCTTCCCTTCCTTTGTTCTCTTCTTAGCTCTTATGAATGTATAAATTGTTGTTTATGCTTTACTTTTATAACTGTTATGTTTACAGATGTTGGTTCTTGAATAAATTTTGGTTAATGCTTTA

Coding sequence (CDS)

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCCGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCGGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGAGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGGGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAACGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTCAAAAATCCGAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGAAGAAGCCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGGTAGCGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGGTCCTCCTCGGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCGTCAGAATCAGAGTGTGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGGAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCGAGGTCTGAATCAGAATCTGATTCCGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAAACGCTAG

Protein sequence

MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSGSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSRRHSRKR

Homology

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BLAST of PI0023112 vs. ExPASy Swiss-Prot
Match: Q9CX48 (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 65/164 (39.63%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 96  QCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKH 155
           +CQKC + GHWTYECK +R Y+ RPSRT +LK      +  + L+      GE    KK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKKALKEKENRLLLQ----SIGETNIEKKI 81

Query: 156 SKKKSKRKHRSNAKSGSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRR 215
            KKK  +   S++ S SDS AS    +S S S T +  SSE+S SD S SS S    S  
Sbjct: 82  KKKKRSKSVTSSSTSSSDSSAS----ESSSESETSASSSSEDSDSDESLSSSSSSSSSSA 141

Query: 216 RRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSRR 260
                          S S SS S S S SES SD+E  ++K ++
Sbjct: 142 CSSSSSSSSSSSSSDSDSSSSSSSSSSSSESSSDDEPQKKKKKK 177

[Close]

BLAST of PI0023112 vs. ExPASy Swiss-Prot
Match: Q8TBK6 (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 65/179 (36.31%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 87  MSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDP 146
           +S A     +CQKC + GHWTYEC  +R Y+ RPSRT +LK      +  + L+    + 
Sbjct: 35  ISEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKEKENRLLLQQSIGET 94

Query: 147 GEEKKPKKHSKKKSKRKHRSNAKSGSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSS 206
             E+K    +KKK  +   S++ S SDS AS     S  S  T +  SSE+S +D SSSS
Sbjct: 95  NVERK----AKKKRSKSVTSSSSSSSDSSAS---DSSSESEETSTSSSSEDSDTDESSSS 154

Query: 207 ESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDSRSES------ESDSDNERSRRKSRR 260
            S    S                SSSS  SDSDS S S      +S SD+E  ++K ++
Sbjct: 155 SSSSASSTT--------------SSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKKKKK 192

[Close]

BLAST of PI0023112 vs. ExPASy Swiss-Prot
Match: Q5EB97 (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05
Identity = 63/161 (39.13%), Postives = 81/161 (50.31%), Query Frame = 0


Query: 96  QCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKH 155
           +CQKC + GHWTYECK +R Y+ RPSRT +LK   L+ K    L+    +   E+K KK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKK-ALKEKENRLLQQSMGETNTERKTKKK 81

Query: 156 SKKKSKRKHRSNAKSGSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRR 215
            + KS       + S SDS AS    +S S S T +  SSE+S +D S SS S       
Sbjct: 82  RRPKS-----VTSTSSSDSSAS----ESSSESETSASSSSEDSDADGSLSSSSSSSAYSS 141

Query: 216 RRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRK 257
                         S SS SS S S SES SD +  + R+K
Sbjct: 142 SSSSSSSSSSSSSDSDSSSSSSSSSSSESSSDDEPPKKRKK 172

[Close]

BLAST of PI0023112 vs. ExPASy TrEMBL
Match: A0A1S3CDQ2 (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.4e-118
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKMEVSLELDNPDPGEE+KPKKHSK KSKRKHRSNAKS SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 RSESESDSDNERSRRKSRRHSRKR 265
           RSESESDSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of PI0023112 vs. ExPASy TrEMBL
Match: A0A5A7TW64 (Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001260 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.4e-118
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKMEVSLELDNPDPGEE+KPKKHSK KSKRKHRSNAKS SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 RSESESDSDNERSRRKSRRHSRKR 265
           RSESESDSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of PI0023112 vs. ExPASy TrEMBL
Match: A0A0A0LJ33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 7.1e-118
Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKS SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSEESSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 RSESESDSDNERSRRKSRRHSRKR 265
           RSESESDSDNERSRRKSRRHSRKR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of PI0023112 vs. ExPASy TrEMBL
Match: A0A6J1H6H5 (zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111460472 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.6e-104
Identity = 246/268 (91.79%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKK--PKKHSKKKSKRKHRSNAKSGSDSEASV 180
           SRTQQLKNPKLRMKM VSLELDNPD G+E+K   KK  KKKSKRKHRS  KS SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTESDDSSEESSSDYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSEESSSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSRSESESDSDNERSRRKSRRHSRKR 265
           DSDS SESESDSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of PI0023112 vs. ExPASy TrEMBL
Match: A0A6J1CAJ2 (zinc finger CCHC domain-containing protein 10 OS=Momordica charantia OX=3673 GN=LOC111009881 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.4e-104
Identity = 241/265 (90.94%), Postives = 250/265 (94.34%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSSAGGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKM  S ELDNPD G+EKK  +   KKSKRKHRSNAKSGSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKHSKKSKRKHRSNAKSGSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECE-RSRRRRKKQKRGRRKRRYSSSSDSSDSD 240
           TDSGSSSVT SDDSSE SSSDYSSSSESE E RSRRRRKKQK+GRRKRRYSSSS+SSDSD
Sbjct: 181 TDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDSD 240

Query: 241 SRSESESDSDNERSRRKSRRHSRKR 265
           S SESESDSD+ERS+RKSRRHSR+R
Sbjct: 241 SGSESESDSDDERSKRKSRRHSRRR 265

[Close]

BLAST of PI0023112 vs. NCBI nr
Match: XP_008460988.2 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_008460989.1 PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >KAA0045615.1 zinc finger CCHC domain-containing protein 10 [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 1.1e-117
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKMEVSLELDNPDPGEE+KPKKHSK KSKRKHRSNAKS SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 RSESESDSDNERSRRKSRRHSRKR 265
           RSESESDSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of PI0023112 vs. NCBI nr
Match: XP_011649249.1 (zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypothetical protein Csa_006617 [Cucumis sativus])

HSP 1 Score: 433.3 bits (1113), Expect = 1.5e-117
Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKGSMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSGSDSEASVFE 180
           SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKS SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSEESSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 RSESESDSDNERSRRKSRRHSRKR 265
           RSESESDSDNERSRRKSRRHSRKR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of PI0023112 vs. NCBI nr
Match: KAG7013679.1 (Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.0 bits (998), Expect = 3.2e-104
Identity = 246/268 (91.79%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKK--PKKHSKKKSKRKHRSNAKSGSDSEASV 180
           SRTQQLKNPKLRMKM VSLELDNPD G+E+K   KK  KKKSKRKHRS  KS SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTESDDSSEESSSDYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSEESSSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSRSESESDSDNERSRRKSRRHSRKR 265
           DSDS SESESDSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of PI0023112 vs. NCBI nr
Match: XP_022959515.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 388.3 bits (996), Expect = 5.4e-104
Identity = 246/268 (91.79%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKK--PKKHSKKKSKRKHRSNAKSGSDSEASV 180
           SRTQQLKNPKLRMKM VSLELDNPD G+E+K   KK  KKKSKRKHRS  KS SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTESDDSSEESSSDYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSEESSSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSRSESESDSDNERSRRKSRRHSRKR 265
           DSDS SESESDSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of PI0023112 vs. NCBI nr
Match: KAG6575110.1 (Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 387.9 bits (995), Expect = 7.1e-104
Identity = 245/268 (91.42%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 40  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 99

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMS+AGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 100 EAKRQMYLMSTEKAVRLGERKDIKVSMSTAGGAAAQCQKCYQSGHWTYECKNERVYISRP 159

Query: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKK--PKKHSKKKSKRKHRSNAKSGSDSEASV 180
           SRTQQLKNPKLRMKM VSLELDNPD G+E+K   KK  KKKSKRKHRS  KS SDSEASV
Sbjct: 160 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 219

Query: 181 FETDSGSSSVTESDDSSEESSSDYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSEESSSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 220 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 279

Query: 241 DSDSRSESESDSDNERSRRKSRRHSRKR 265
           DSDS SESESDSD+ERSRRKSRRHSRKR
Sbjct: 280 DSDSESESESDSDHERSRRKSRRHSRKR 307

[Close]

BLAST of PI0023112 vs. TAIR 10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.2e-70
Identity = 186/282 (65.96%), Postives = 213/282 (75.53%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MS+ K+EKSQ AA+RIKAA L+AAKGLSR QAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAG---GAAAQCQKCYQMGHWTYECKNERVYI 120
           E KRQMYLMSTEKAVRLGERKD   S S+ G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 121 SRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPK--------KHSKKKSKRKHRSNAK 180
           SRPSRTQQLKNPKLR K  V     + D  EE++P         +   KKSKRKHRS + 
Sbjct: 121 SRPSRTQQLKNPKLRTKPSVDDLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKHRSKSD 180

Query: 181 SGSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRRR-------RKKQKR 240
           S SDSEASVFETD        SD SS ESSS+YSSSS+SE ER RRR       ++KQ++
Sbjct: 181 SESDSEASVFETD--------SDGSSGESSSEYSSSSDSEDERRRRRKAKKSKKKQKQRK 240

Query: 241 GRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSRRHSRKR 265
            RR+R  SSSS+SS+S+S S+S+SD D  R ++KS+RHS KR
Sbjct: 241 ERRRRYSSSSSESSESESASDSDSDEDRSRRKKKSKRHSNKR 274

The following BLAST results are available for this feature:

BLAST of PI0023112 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CX48	1.1e-06	39.63	Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1...	[more]
Q8TBK6	1.6e-05	36.31	Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10...	[more]
Q5EB97	3.5e-05	39.13	Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z...	[more]

BLAST of PI0023112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDQ2	5.4e-118	98.48	zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TW64	5.4e-118	98.48	Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0LJ33	7.1e-118	98.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1	[more]
A0A6J1H6H5	2.6e-104	91.79	zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1CAJ2	3.4e-104	90.94	zinc finger CCHC domain-containing protein 10 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of PI0023112 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460988.2	1.1e-117	98.48	PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_0084...	[more]
XP_011649249.1	1.5e-117	98.86	zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypo...	[more]
KAG7013679.1	3.2e-104	91.79	Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. arg...	[more]
XP_022959515.1	5.4e-104	91.79	zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata]	[more]
KAG6575110.1	7.1e-104	91.42	Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma s...	[more]

BLAST of PI0023112 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49400.1	3.2e-70	65.96	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 92..129 e-value: 2.9E-20 score: 71.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..254
IPR039715	Zinc finger CCHC domain-containing protein 10	PANTHER	PTHR13491	ZCCHC10 PROTEIN	coord: 1..253
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 81..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023112.1	PI0023112.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding