PI0023102 (gene) Melon (PI 482460) v1

Overview


Name	PI0023102
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Defensin-like protein
Location	chr05: 14602619 .. 14603115 (+)
RNA-Seq Expression	PI0023102
Synteny	PI0023102

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCTGTCTCCTTCTCAACCATTCTTCTTGCACTTTTACTCATTTTCAGTGGTACTCCCTATTTAGCTTTTATTATTTATTTTAATTTCATCATCACATGCTTGCCTTGCCTTTTGATTTCTTTTCGCCATTTTAATTACTTTTTTGAAAAACTCTATACCCGATGTAAGTGATTGATCTACGTATTAGTTTCAATTTGTATTATTTTACCAAAATGAAAACAACAAGATTCAATACTTTATAGAGTTTATGGTTTATTTACCTAAGTATTGAAGATTGAGAGGTTGGTTGATGGATTTTGATGAATGCAGGGGAAACTATGATGAGAAGTGTTAAGGGTGTAGGGCTATGCGAGAAGGCTTTGCATGGAGGAGGTTGCAAGGATGCCGAGTGTACGAGTGGCTGCAAAGCCCAATTTGGAGCAGGTGCAATGGGATTGTGCTTTTTCTTTCGAACGCCAAGTGATACTTGTCTTTGCCGCTATCCTTGTTGA

mRNA sequence

ATGAAGTCTGTCTCCTTCTCAACCATTCTTCTTGCACTTTTACTCATTTTCAGTGGGGAAACTATGATGAGAAGTGTTAAGGGTGTAGGGCTATGCGAGAAGGCTTTGCATGGAGGAGGTTGCAAGGATGCCGAGTGTACGAGTGGCTGCAAAGCCCAATTTGGAGCAGGTGCAATGGGATTGTGCTTTTTCTTTCGAACGCCAAGTGATACTTGTCTTTGCCGCTATCCTTGTTGA

Coding sequence (CDS)

ATGAAGTCTGTCTCCTTCTCAACCATTCTTCTTGCACTTTTACTCATTTTCAGTGGGGAAACTATGATGAGAAGTGTTAAGGGTGTAGGGCTATGCGAGAAGGCTTTGCATGGAGGAGGTTGCAAGGATGCCGAGTGTACGAGTGGCTGCAAAGCCCAATTTGGAGCAGGTGCAATGGGATTGTGCTTTTTCTTTCGAACGCCAAGTGATACTTGTCTTTGCCGCTATCCTTGTTGA

Protein sequence

MKSVSFSTILLALLLIFSGETMMRSVKGVGLCEKALHGGGCKDAECTSGCKAQFGAGAMGLCFFFRTPSDTCLCRYPC

Homology

[Close]

BLAST of PI0023102 vs. ExPASy TrEMBL
Match: A0A5A7V7B1 (Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3861G00090 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.9e-32
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGETMMRSVKGV-GLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKSVSFS ILLALLLIFSGETMM+SV+GV GLCEKALHGGGCKDAEC SGCKA FG GAM
Sbjct: 1  MKSVSFSAILLALLLIFSGETMMKSVEGVGGLCEKALHGGGCKDAECMSGCKALFGKGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. ExPASy TrEMBL
Match: A0A5D3DU83 (Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00140 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.9e-32
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGETMMRSVKGV-GLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKS SFSTILLALLLIFSGETMM+SV+GV GLCEKALHGGGCKDAEC SGCKA FG GAM
Sbjct: 1  MKSFSFSTILLALLLIFSGETMMKSVEGVGGLCEKALHGGGCKDAECMSGCKALFGKGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. ExPASy TrEMBL
Match: A0A5A7V978 (Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00660 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.1e-32
Identity = 71/79 (89.87%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGETMMRSVKGV-GLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKS+SFS ILLALLLIFSGETMM+SV+GV GLCEKALHGGGCKDAEC SGCKA FG GAM
Sbjct: 1  MKSISFSAILLALLLIFSGETMMKSVEGVGGLCEKALHGGGCKDAECISGCKALFGKGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. ExPASy TrEMBL
Match: A0A5D3E4P9 (Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold924G00010 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.1e-32
Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGETMMRSVKGV-GLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKS+SFSTILL+LLLIFSGETMM+SV+GV GLCEKALHGGGCKDAEC SGCKA FG GAM
Sbjct: 1  MKSLSFSTILLSLLLIFSGETMMKSVEGVGGLCEKALHGGGCKDAECMSGCKALFGKGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. ExPASy TrEMBL
Match: A0A0A0LH75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G077550 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGET-MMRSVKGVGLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKSVSFS ILLALLL+FSGET MMRSV+G GLCEKALHGGGCKDAEC SGCK  FGAGAM
Sbjct: 1  MKSVSFSAILLALLLVFSGETIMMRSVEGEGLCEKALHGGGCKDAECASGCKHVFGAGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. NCBI nr
Match: KAA0050021.1 (Defensin-like protein [Cucumis melo var. makuwa] >TYK27251.1 Defensin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 8.1e-32
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGETMMRSVKGV-GLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKS SFSTILLALLLIFSGETMM+SV+GV GLCEKALHGGGCKDAEC SGCKA FG GAM
Sbjct: 1  MKSFSFSTILLALLLIFSGETMMKSVEGVGGLCEKALHGGGCKDAECMSGCKALFGKGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. NCBI nr
Match: KAA0061621.1 (Defensin-like protein [Cucumis melo var. makuwa] >TYK19754.1 Defensin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 8.1e-32
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGETMMRSVKGV-GLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKSVSFS ILLALLLIFSGETMM+SV+GV GLCEKALHGGGCKDAEC SGCKA FG GAM
Sbjct: 1  MKSVSFSAILLALLLIFSGETMMKSVEGVGGLCEKALHGGGCKDAECMSGCKALFGKGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. NCBI nr
Match: KAA0062251.1 (Defensin-like protein [Cucumis melo var. makuwa] >TYK27293.1 Defensin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 71/79 (89.87%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGETMMRSVKGV-GLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKS+SFS ILLALLLIFSGETMM+SV+GV GLCEKALHGGGCKDAEC SGCKA FG GAM
Sbjct: 1  MKSISFSAILLALLLIFSGETMMKSVEGVGGLCEKALHGGGCKDAECISGCKALFGKGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. NCBI nr
Match: TYK30550.1 (Defensin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGETMMRSVKGV-GLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKS+SFSTILL+LLLIFSGETMM+SV+GV GLCEKALHGGGCKDAEC SGCKA FG GAM
Sbjct: 1  MKSLSFSTILLSLLLIFSGETMMKSVEGVGGLCEKALHGGGCKDAECMSGCKALFGKGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

[Close]

BLAST of PI0023102 vs. NCBI nr
Match: KGN61300.1 (hypothetical protein Csa_006301 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 2.4e-31
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MKSVSFSTILLALLLIFSGET-MMRSVKGVGLCEKALHGGGCKDAECTSGCKAQFGAGAM 60
          MKSVSFS ILLALLL+FSGET MMRSV+G GLCEKALHGGGCKDAEC SGCK  FGAGAM
Sbjct: 1  MKSVSFSAILLALLLVFSGETIMMRSVEGEGLCEKALHGGGCKDAECASGCKHVFGAGAM 60

Query: 61 GLCFFFRTPSDTCLCRYPC 79
          GLCFFFRTPSDTCLCRYPC
Sbjct: 61 GLCFFFRTPSDTCLCRYPC 79

The following BLAST results are available for this feature:

BLAST of PI0023102 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023102 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7B1	3.9e-32	91.14	Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38...	[more]
A0A5D3DU83	3.9e-32	91.14	Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24...	[more]
A0A5A7V978	5.1e-32	89.87	Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24...	[more]
A0A5D3E4P9	5.1e-32	89.87	Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold92...	[more]
A0A0A0LH75	1.1e-31	89.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G077550 PE=3 SV=1	[more]

BLAST of PI0023102 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050021.1	8.1e-32	91.14	Defensin-like protein [Cucumis melo var. makuwa] >TYK27251.1 Defensin-like prote...	[more]
KAA0061621.1	8.1e-32	91.14	Defensin-like protein [Cucumis melo var. makuwa] >TYK19754.1 Defensin-like prote...	[more]
KAA0062251.1	1.1e-31	89.87	Defensin-like protein [Cucumis melo var. makuwa] >TYK27293.1 Defensin-like prote...	[more]
TYK30550.1	1.1e-31	89.87	Defensin-like protein [Cucumis melo var. makuwa]	[more]
KGN61300.1	2.4e-31	89.87	hypothetical protein Csa_006301 [Cucumis sativus]	[more]

BLAST of PI0023102 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010851	Defensin-like protein	PFAM	PF07333	SLR1-BP	coord: 31..78 e-value: 3.7E-8 score: 33.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023102.1	PI0023102.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0031640	killing of cells of other organism