PI0023091 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTCTTATCTCAAAAAAGAAAAAGAAAGAAAAAATGTCGGGCGTTTGGGTGTTCAGAAACGGAGTCGTTCGGCTAATGGAAAACGGCGGAGGTAATGCGGCGGAGAGCGGTCACCAGTCTCAACTCCGGCGGAAAACACTGGTGTTCAGTCCGACGGCGGAGGTGATGACGTCATACGCAGCGTTGGAAAAGAAATTGCTGACGTTGGGTTGGGAGCGTTATTACGATGATCCAAATCTGTTGCAATTTCATAAGAGATCAACGGTCCACCTTATTTCTCTCCCAAAAGATTTTGCTAAATTCAAATCCATGCATATGTACGACATCGTCGTCAAAAATCGAAACAATTTCGAAGTTATAGACACTTAATTTTTAAACTCATTTTTTAAAATGAATAAAATTATAATTTTAAATAAAATTACTATTTTCTTTTAAATTATTGATGCCATCCTTACAATTGAATGTAAGTTTATATGTTATGTGTGATTTTCTTGTTCGAACACTTGTTGGATTTGGATTTAATTGTATGTGACAATGATGTGTTTTTATATAAATATATGTATTTGAATTAATTAAGTTGGACTCAAGTTTGTATAGTTGCTATGATAGTTGTGTATTGTTGGAGTTGTTTGTGTGGAA CTTCTCTTATCTCAAAAAAGAAAAAGAAAGAAAAAATGTCGGGCGTTTGGGTGTTCAGAAACGGAGTCGTTCGGCTAATGGAAAACGGCGGAGGTAATGCGGCGGAGAGCGGTCACCAGTCTCAACTCCGGCGGAAAACACTGGTGTTCAGTCCGACGGCGGAGGTGATGACGTCATACGCAGCGTTGGAAAAGAAATTGCTGACGTTGGGTTGGGAGCGTTATTACGATGATCCAAATCTGTTGCAATTTCATAAGAGATCAACGGTCCACCTTATTTCTCTCCCAAAAGATTTTGCTAAATTCAAATCCATGCATATGTACGACATCGTCGTCAAAAATCGAAACAATTTCGAAGTTATAGACACTTAATTTTTAAACTCATTTTTTAAAATGAATAAAATTATAATTTTAAATAAAATTACTATTTTCTTTTAAATTATTGATGCCATCCTTACAATTGAATGTAAGTTTATATGTTATGTGTGATTTTCTTGTTCGAACACTTGTTGGATTTGGATTTAATTGTATGTGACAATGATGTGTTTTTATATAAATATATGTATTTGAATTAATTAAGTTGGACTCAAGTTTGTATAGTTGCTATGATAGTTGTGTATTGTTGGAGTTGTTTGTGTGGAA ATGTCGGGCGTTTGGGTGTTCAGAAACGGAGTCGTTCGGCTAATGGAAAACGGCGGAGGTAATGCGGCGGAGAGCGGTCACCAGTCTCAACTCCGGCGGAAAACACTGGTGTTCAGTCCGACGGCGGAGGTGATGACGTCATACGCAGCGTTGGAAAAGAAATTGCTGACGTTGGGTTGGGAGCGTTATTACGATGATCCAAATCTGTTGCAATTTCATAAGAGATCAACGGTCCACCTTATTTCTCTCCCAAAAGATTTTGCTAAATTCAAATCCATGCATATGTACGACATCGTCGTCAAAAATCGAAACAATTTCGAAGTTATAGACACTTAA MSGVWVFRNGVVRLMENGGGNAAESGHQSQLRRKTLVFSPTAEVMTSYAALEKKLLTLGWERYYDDPNLLQFHKRSTVHLISLPKDFAKFKSMHMYDIVVKNRNNFEVIDT Homology
BLAST of PI0023091 vs. ExPASy Swiss-Prot
Match: Q8LR63 (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.8e-32 Identity = 74/126 (58.73%), Postives = 87/126 (69.05%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 9.2e-32 Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-30 Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-30 Identity = 67/113 (59.29%), Postives = 87/113 (76.99%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 2.3e-30 Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy TrEMBL
Match: A0A1S3C8H5 (flowering-promoting factor 1-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103497861 PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51 Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy TrEMBL
Match: A0A0A0KCC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G194670 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49 Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy TrEMBL
Match: A0A6J1H4F8 (flowering-promoting factor 1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111460392 PE=3 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 4.9e-44 Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy TrEMBL
Match: A0A6J1KVW8 (flowering-promoting factor 1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111499175 PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43 Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of PI0023091 vs. ExPASy TrEMBL
Match: A0A6J1ER18 (flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111436916 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 3.9e-41 Identity = 84/110 (76.36%), Postives = 96/110 (87.27%), Query Frame = 0
BLAST of PI0023091 vs. NCBI nr
Match: XP_008458459.1 (PREDICTED: flowering-promoting factor 1-like protein 1 [Cucumis melo]) HSP 1 Score: 212.2 bits (539), Expect = 2.2e-51 Identity = 103/111 (92.79%), Postives = 106/111 (95.50%), Query Frame = 0
BLAST of PI0023091 vs. NCBI nr
Match: XP_004143087.1 (flowering-promoting factor 1-like protein 1 [Cucumis sativus]) HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49 Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 0
BLAST of PI0023091 vs. NCBI nr
Match: XP_038875612.1 (flowering-promoting factor 1-like protein 1 [Benincasa hispida]) HSP 1 Score: 188.7 bits (478), Expect = 2.6e-44 Identity = 91/112 (81.25%), Postives = 102/112 (91.07%), Query Frame = 0
BLAST of PI0023091 vs. NCBI nr
Match: XP_022959407.1 (flowering-promoting factor 1-like protein 3 [Cucurbita moschata] >KAG6575061.1 Flowering-promoting factor 1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43 Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of PI0023091 vs. NCBI nr
Match: XP_023006452.1 (flowering-promoting factor 1-like protein 3 [Cucurbita maxima] >XP_023549095.1 flowering-promoting factor 1-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43 Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of PI0023091 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 ) HSP 1 Score: 133.7 bits (335), Expect = 9.4e-32 Identity = 67/113 (59.29%), Postives = 87/113 (76.99%), Query Frame = 0
BLAST of PI0023091 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 ) HSP 1 Score: 127.5 bits (319), Expect = 6.7e-30 Identity = 70/123 (56.91%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of PI0023091 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 127.5 bits (319), Expect = 6.7e-30 Identity = 64/111 (57.66%), Postives = 85/111 (76.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|