PI0023068 (gene) Melon (PI 482460) v1

Overview


Name	PI0023068
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	60S acidic ribosomal protein family
Location	chr11: 5056842 .. 5058156 (+)
RNA-Seq Expression	PI0023068
Synteny	PI0023068

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGCTCCGATCTCTCTCACTCTTCATTGCGGCTTCTGTTCCGAACTTTCTCAAGTGTTCTTTCATCTCCCAATCTTGGTTTTTTCCATTGATTTTTGCTGTGTAAGTTCATCGCATTTCTGGTGTTTAATATTTGTTTGACGTTGTTGAAACAGAAATGAAGGTGGTCGCTGCATATTTGTTGTCCGTTCTCGGTGGCAACACCAGCCCCGGAGTCGATGATGTGAAGTCTATTCTTAATTCAGGTTCTTCTATTGCAGACTATTTGTCTTTTAATCATAGATTTATTTGCTACTTCACTCGTTGTTTTGTTGCTTTCGGAGATCGATTTGATGTTATAGGATTTGTAAATTGGAAATGATTGGGCTTTGTTCGATTCGAAAGTCTAGGTTAGACTGCAGTTTGTTCATGATTTAGTAAGGGAGAAGCTGGAAAATAATTGAAAATCTTGAAACGTCTGACATGAAATGATGGGCGGTGTTACTGAATTTGCGTTAAGGTGGGGTTTTTAATTTTTATGTACAGTTGGGGCTGAGATAGATGACGAGAGGATCACCTTGCTCCTATCGCAAGTGAAAGGAAAGGATGTCACGGAGTTGATAGCCTCCGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCTCTGCCGGCGGTGCCGCTGGTGGTGGTGCAGCACCAGCCCCAGCCGAGCAGAAGAAAGAGGAGAAGGTCGAGGAGAAAGAAGAATCCGACGATGTAAGTGTTTAAGCTTTACCCATTTTGAATTGCTTTGATATGTTCCAATCTGTGAGTGACTTGCTCTATGAACTTTATGTTACCTAAATTTTATGTTCTATCTTTCTGCAGGATATGGGTTTCAGCCTCTTGACTAAGCAACTTATTTGGTGTCGTTATCAGTTAGTGATTTTAGTTGATTTTCGTTCAAGTTTCCGGGCTTTGGTAGCTTGGTAGGGTTTTTCTTTTTGACTTGTTTTGGAACTCAAAAATTTTGATAGATGAAAGTTCATTTGTTCAATTTCAATATTTCAGTAATTACTGTCATTTGACTACTTGTGTGATTTATAAGTCCCACTGTTTCTTATCTCCTTGCTCATGATTTGTTTTGGCTTATGCTAATTTGCATCACTGATTGTTTTGTTGTTTCACTTTGTTTTGTTATCTGTGAATCTGCAGTTTGCAGACAATTAGAATGTAAATTTTCATGCATACATTAGAGTATCCGTTAATGTTCGTATGAACTTTAACTTGTATTAATGTATTTTTAAGTCTATCAAGAAACCCGATTTATCAAAT

mRNA sequence

CGGCTCCGATCTCTCTCACTCTTCATTGCGGCTTCTGTTCCGAACTTTCTCAAGTGTTCTTTCATCTCCCAATCTTGGTTTTTTCCATTGATTTTTGCTGTGTAAGTTCATCGCATTTCTGGTGTTTAATATTTGTTTGACGTTGTTGAAACAGAAATGAAGGTGGTCGCTGCATATTTGTTGTCCGTTCTCGGTGGCAACACCAGCCCCGGAGTCGATGATGTGAAGTCTATTCTTAATTCAGTTGGGGCTGAGATAGATGACGAGAGGATCACCTTGCTCCTATCGCAAGTGAAAGGAAAGGATGTCACGGAGTTGATAGCCTCCGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCTCTGCCGGCGGTGCCGCTGGTGGTGGTGCAGCACCAGCCCCAGCCGAGCAGAAGAAAGAGGAGAAGGTCGAGGAGAAAGAAGAATCCGACGATGATATGGGTTTCAGCCTCTTGACTAAGCAACTTATTTGGTGTCGTTATCAGTTAGTGATTTTAGTTGATTTTCGTTCAAGTTTCCGGGCTTTGGTAGCTTGGTAGGGTTTTTCTTTTTGACTTGTTTTGGAACTCAAAAATTTTGATAGATGAAAGTTCATTTGTTCAATTTCAATATTTCAGTAATTACTGTCATTTGACTACTTGTGTGATTTATAAGTCCCACTGTTTCTTATCTCCTTGCTCATGATTTGTTTTGGCTTATGCTAATTTGCATCACTGATTGTTTTGTTGTTTCACTTTGTTTTGTTATCTGTGAATCTGCAGTTTGCAGACAATTAGAATGTAAATTTTCATGCATACATTAGAGTATCCGTTAATGTTCGTATGAACTTTAACTTGTATTAATGTATTTTTAAGTCTATCAAGAAACCCGATTTATCAAAT

Coding sequence (CDS)

ATGAAGGTGGTCGCTGCATATTTGTTGTCCGTTCTCGGTGGCAACACCAGCCCCGGAGTCGATGATGTGAAGTCTATTCTTAATTCAGTTGGGGCTGAGATAGATGACGAGAGGATCACCTTGCTCCTATCGCAAGTGAAAGGAAAGGATGTCACGGAGTTGATAGCCTCCGGACGGGAGAAGTTGGCATCAGTGCCGTCTGGTGGCGGTGCAATCGCCGTCTCCGCCTCTGCCGGCGGTGCCGCTGGTGGTGGTGCAGCACCAGCCCCAGCCGAGCAGAAGAAAGAGGAGAAGGTCGAGGAGAAAGAAGAATCCGACGATGATATGGGTTTCAGCCTCTTGACTAAGCAACTTATTTGGTGTCGTTATCAGTTAGTGATTTTAGTTGATTTTCGTTCAAGTTTCCGGGCTTTGGTAGCTTGGTAG

Protein sequence

MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGREKLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSLLTKQLIWCRYQLVILVDFRSSFRALVAW

Homology

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BLAST of PI0023068 vs. ExPASy Swiss-Prot
Match: O24415 (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-33
Identity = 82/113 (72.57%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKV+AAYLL+VLGGNTSP  DDVKSIL SVGAE D+E++  LL+++K KD+TE+IA+GRE
Sbjct: 1   MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           +L+SVPSGGGAI + A A   AGGGAAPA  E KKEEKVEEKEESD+DMGFSL
Sbjct: 61  RLSSVPSGGGAIDMGAPA-AVAGGGAAPA-EEAKKEEKVEEKEESDEDMGFSL 111

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BLAST of PI0023068 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-32
Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MK VAAYLL+VL GN SP  DD+ +IL SVG E+D+E++ LLLSQ+ GKD+TELIA+GRE
Sbjct: 1   MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           K ASVP GGG +AV+A+A   A GGAAPA AE KKEEKVEEKEESDDDMGFSL
Sbjct: 61  KFASVPCGGGGVAVAAAA--PAAGGAAPA-AEAKKEEKVEEKEESDDDMGFSL 110

[Close]

BLAST of PI0023068 vs. ExPASy Swiss-Prot
Match: P51407 (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 7.6e-31
Identity = 79/114 (69.30%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAA+LL+VL G  SP   D+K IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPS-GGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPS GGG +AV+++  G  GGG APA AE KKEEK EEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGAPA-AESKKEEKKEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-30
Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKV+AA+LL++LGGNTSP  +D+KSIL SVGA+ DD++I LLLSQVKGKD+TELIASGRE
Sbjct: 1   MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           +LASVPSGGG +AV+A+AGG  G   A A  E KKEEK E  EESD+++GFSL
Sbjct: 61  RLASVPSGGG-VAVAAAAGGGGGDAPAAAAEEPKKEEKSE--EESDEELGFSL 110

[Close]

BLAST of PI0023068 vs. ExPASy Swiss-Prot
Match: Q9SLF7 (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-30
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VL G  SP   D+K+IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGG     ASA    GGG   + AE KKEEK EEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. ExPASy TrEMBL
Match: A0A5A7SR49 (60S acidic ribosomal protein P2B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00400 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPGVDDVK+ILNSVG EID+ERITLLLS+VKGKDVTELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. ExPASy TrEMBL
Match: A0A1S3C8T5 (60S acidic ribosomal protein P2B-like OS=Cucumis melo OX=3656 GN=LOC103497955 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPGVDDVK+ILNSVG EID+ERITLLLS+VKGKDVTELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. ExPASy TrEMBL
Match: A0A0A0KGP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151730 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 104/113 (92.04%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPG DDVKSILNSVGAEID+ERITLLL++VKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGAIAVSA+AGGA GGGAA APAEQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. ExPASy TrEMBL
Match: A0A6J1J9Z4 (60S acidic ribosomal protein P2B-like OS=Cucurbita maxima OX=3661 GN=LOC111483902 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.9e-42
Identity = 97/113 (85.84%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPG+DDVK ILNSVGAE+D++RI  LLSQVKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGA+ ++A AGGAAGGGAAPA  EQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAPAAVEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. ExPASy TrEMBL
Match: A0A6J1FYH3 (60S acidic ribosomal protein P2B-like OS=Cucurbita moschata OX=3662 GN=LOC111448674 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.9e-42
Identity = 97/113 (85.84%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPG+DDVK ILNSVGAE+D++RI  LLSQVKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGA+ ++A AGG AGGGAAPA AEQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAVGIAAPAGGVAGGGAAPAAAEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. NCBI nr
Match: XP_008458601.1 (PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis melo] >KAA0033390.1 60S acidic ribosomal protein P2B-like [Cucumis melo var. makuwa])

HSP 1 Score: 195.3 bits (495), Expect = 3.6e-46
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPGVDDVK+ILNSVG EID+ERITLLLS+VKGKDVTELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGVDDVKAILNSVGVEIDEERITLLLSEVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. NCBI nr
Match: XP_004145795.1 (60S acidic ribosomal protein P2B [Cucumis sativus] >KGN46936.1 hypothetical protein Csa_020720 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-44
Identity = 104/113 (92.04%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPG DDVKSILNSVGAEID+ERITLLL++VKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGADDVKSILNSVGAEIDEERITLLLAEVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGAIAVSA+AGGA GGGAA APAEQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAIAVSAAAGGATGGGAAAAPAEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. NCBI nr
Match: XP_038901119.1 (60S acidic ribosomal protein P2B-like [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42
Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGN SPG+DDVKSILNSVGAE+DD+RI LLLSQVKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNPSPGLDDVKSILNSVGAEVDDDRIGLLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGAIAVSA AGGAAGGGAA A AEQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAIAVSAPAGGAAGGGAALAAAEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. NCBI nr
Match: KAG6570492.1 (60S acidic ribosomal protein P2B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.0 bits (458), Expect = 7.0e-42
Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPG+DDVK ILNSVGAE+D++RI  LLSQVKGKD+TELIASGRE
Sbjct: 70  MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 129

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGA+ ++A AGGAAGGGAAPA AEQKKEEKVEEKEESDDDMGFSL
Sbjct: 130 KLASVPSGGGAVGIAAPAGGAAGGGAAPAAAEQKKEEKVEEKEESDDDMGFSL 182

[Close]

BLAST of PI0023068 vs. NCBI nr
Match: KAG7010354.1 (60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 7.0e-42
Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VLGGNTSPG+DDVK ILNSVGAE+D++RI  LLSQVKGKD+TELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTSPGLDDVKCILNSVGAEVDEDRIDSLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGGA+ ++A AGGAAGGGAAPA AEQKKEEKVEEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGAVGIAAPAGGAAGGGAAPAAAEQKKEEKVEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. TAIR 10
Match: AT2G27720.1 (60S acidic ribosomal protein family )

HSP 1 Score: 134.8 bits (338), Expect = 5.4e-32
Identity = 79/114 (69.30%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAA+LL+VL G  SP   D+K IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPS-GGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPS GGG +AV+++  G  GGG APA AE KKEEK EEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGAPA-AESKKEEKKEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family )

HSP 1 Score: 132.5 bits (332), Expect = 2.7e-31
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VL G  SP   D+K+IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGG     ASA    GGG   + AE KKEEK EEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. TAIR 10
Match: AT2G27710.2 (60S acidic ribosomal protein family )

HSP 1 Score: 132.5 bits (332), Expect = 2.7e-31
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VL G  SP   D+K+IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGG     ASA    GGG   + AE KKEEK EEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. TAIR 10
Match: AT2G27710.3 (60S acidic ribosomal protein family )

HSP 1 Score: 132.5 bits (332), Expect = 2.7e-31
Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKVVAAYLL+VL G  SP   D+K+IL SVGAE +D +I LLL +VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGG     ASA    GGG   + AE KKEEK EEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSL 113

[Close]

BLAST of PI0023068 vs. TAIR 10
Match: AT3G44590.2 (60S acidic ribosomal protein family )

HSP 1 Score: 131.3 bits (329), Expect = 5.9e-31
Identity = 76/113 (67.26%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 1   MKVVAAYLLSVLGGNTSPGVDDVKSILNSVGAEIDDERITLLLSQVKGKDVTELIASGRE 60
           MKV AA+LL+VLGGN +P  D++K I+ +VGA++D E I LLL +V GKD+ ELIASGRE
Sbjct: 1   MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60

Query: 61  KLASVPSGGGAIAVSASAGGAAGGGAAPAPAEQKKEEKVEEKEESDDDMGFSL 114
           KLASVPSGGG   V+ SA  ++GGG A APAE KKE K EEKEESDDDMGFSL
Sbjct: 61  KLASVPSGGG---VAVSAAPSSGGGGAAAPAE-KKEAKKEEKEESDDDMGFSL 109

The following BLAST results are available for this feature:

BLAST of PI0023068 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24415	2.8e-33	72.57	60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1	[more]
P46252	1.4e-32	71.68	60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3	[more]
P51407	7.6e-31	69.30	60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 ...	[more]
P41099	2.9e-30	69.03	60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1	[more]
Q9SLF7	3.7e-30	68.14	60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 ...	[more]

BLAST of PI0023068 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SR49	1.7e-46	95.58	60S acidic ribosomal protein P2B-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C8T5	1.7e-46	95.58	60S acidic ribosomal protein P2B-like OS=Cucumis melo OX=3656 GN=LOC103497955 PE...	[more]
A0A0A0KGP6	1.2e-44	92.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151730 PE=3 SV=1	[more]
A0A6J1J9Z4	9.9e-42	85.84	60S acidic ribosomal protein P2B-like OS=Cucurbita maxima OX=3661 GN=LOC11148390...	[more]
A0A6J1FYH3	9.9e-42	85.84	60S acidic ribosomal protein P2B-like OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]

BLAST of PI0023068 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458601.1	3.6e-46	95.58	PREDICTED: 60S acidic ribosomal protein P2B-like [Cucumis melo] >KAA0033390.1 60...	[more]
XP_004145795.1	2.6e-44	92.04	60S acidic ribosomal protein P2B [Cucumis sativus] >KGN46936.1 hypothetical prot...	[more]
XP_038901119.1	1.1e-42	91.15	60S acidic ribosomal protein P2B-like [Benincasa hispida]	[more]
KAG6570492.1	7.0e-42	86.73	60S acidic ribosomal protein P2B, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG7010354.1	7.0e-42	86.73	60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of PI0023068 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27720.1	5.4e-32	69.30	60S acidic ribosomal protein family	[more]
AT2G27710.1	2.7e-31	68.14	60S acidic ribosomal protein family	[more]
AT2G27710.2	2.7e-31	68.14	60S acidic ribosomal protein family	[more]
AT2G27710.3	2.7e-31	68.14	60S acidic ribosomal protein family	[more]
AT3G44590.2	5.9e-31	67.26	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 18..113 e-value: 1.0E-22 score: 80.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..108
None	No IPR available	PANTHER	PTHR21141:SF83	60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE	coord: 2..114
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..59 e-value: 5.9E-25 score: 89.2
IPR044076	Ribosomal protein P2	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 2..114
IPR044076	Ribosomal protein P2	CDD	cd05833	Ribosomal_P2	coord: 1..73 e-value: 6.74087E-37 score: 120.446
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 2..115 score: 15.606896

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023068.2	PI0023068.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002182	cytoplasmic translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome