PI0023032 (gene) Melon (PI 482460) v1

Overview


Name	PI0023032
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DNA ligase 1-like
Location	chr06: 4785901 .. 4788608 (+)
RNA-Seq Expression	PI0023032
Synteny	PI0023032

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACTACGAACAATCCTTCCAACGAATCAACATTTCCCTTCTTCGCTGTCGCCTCTCAATTGATCTCTCCCCTCCCTGTTCTTAAACCGGGAGAGATCCATTCCCTTTTCCATCCAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCGTCCATTTTCCTCGATCAATGGGTTGCGGAGAGTCCAAGCTTGCTATCGCCACCGCCGACGGCGTTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGACACAAAGCAGCTGATGGATCCAAGACCAGTGCTGCCGATTCGTCCGTGGCTGATTTGAAGGTTCCGTCACTGAACAAAATCGATAGCTCTGTGAAGGTTGAATCCTCGGAGAATAAAGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGATTGAACCGGAGGTTAAGATAGAGCAGACGATCGATGACGCTGTGAAGATTGAATCGGAGGAGAAGAGCGATAGCATTGTGGCGACGGAAGAAGTGAAAACAGAGGAGAGAAAAGAGAAGGAGGTCGCCGGCGACAGTGAGAAGAAGGAGAAGGAAAAGGAGGAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTAGAAGAGGGAGTTAAAGCTGTTGAGGAAAAACCGTTGGCTGGAGAAGTTGAAGAGGCAGGAATTAAATCTGTAGAGGAAAAGGAGGTTCCCGGAGAAACGAAAACGGAGAAGAAGGAAGGCGGCGCTGTTGAAGAAGGGATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGTCAGTAAACTTTTGACATAATGCAACTAATTTACCGATATAAATCCCATCAATATATTCATTTTATCATATTTAAAAATTACCCTCAAATTCACTTTAAACTCTTAGATTTGAAAATTATTTATTTGTTTGTTTTTTTTTATAATTAAGATTACAAACCATATGTTTTTCTTATCTACATTTTTATAAAATTCAAATAAAAAATTAAAAACCAAAAAAACAAAATAATTTTTAAAAAATGTTTTTTTTTTCTGTTTAAATTTAAGATTTAAATGATTACGAACATAATTGAAACAAATTCGATTTTAAAAAATCAAATTGTTATCAAACAAGATCTAAAAATTAAACTTTCAAACAAATTTTTAAAACTAACTAATAGACTTTAAACTTTCACTTTTGTGTACAACAAGTTTGTGACTCTTAGAAAATGTCGAACATGCCAAAGATTTTTGGTGTGCTTGTAAAAGTTAAAAAGAAAACAACGACAATTTCGAAAGAACTCAATAGATAATAAATATTAAGTAGAGTTGTTTTCAGATATAGCAAAACCGTTAGAAAAAATATTTACAAACATAATAAAATTTTACTTTCTATTCATTGTAGAATATGATGTTTTGTCATTTAAAATTATTTCTCTTAAGTACTTATCCATGGAATCAAGTGGTTTATAATTTATTATTAAATCAAAATGACAATATTATATCATTAATAACAAATTTGATTTCACCGGCATAACCTCGATGTACAATATTATTATCTTCAAAGTTAGAATTTTAATTCTTCGAAAATCAAACTTATTTTCTCTCCAAAGATGTAAATAGTTTGAATGAACCAAAAGTTTGACATATGATTTAAAAATTGTAAGAGTTTAAAAAATGGTAGTTTGTGTGGACAGGAGAGGCAGTGAAATTGAAAGAAGAAAGTGAAGCTAAGAAGGAAGAGACCCAAAGCTTAGCACCCACTCCATTACAAGACAAGAATCTCAAAGATCCCAAGGTTTGCTAATCACAAAGTTTATTTCTAAAATCTTCTTATTATTCTGTACATTAACATTATTATTAGGGGAAAAAAAATTCTTTTATAAACTGTCCCTTAAAAAAAAATAAAAAAATAGCACTTTCAAATATAGCAAAATTTCATGCCTATCATTGATAGATATTGATAGGGCCTATAAGTGATAGAATATGAAATTTTGTTACATTTTGTAAATATTTTCAATAGTTTTACCGTTTATCATAATTCTACTAAAAAAAACATAATCAAAACAATGTTATTTATAAATTTAATTCCTAAACTCTGTAATTTATATATGGCGATTAAAGACAAACGTCATGTAATTTCATATTTACCTATTTTTTTTAATATAAAATTAAAGAAGAAACTAAAGAATCTTATTAATGGATTAATGCAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAACACCAACTAAGTGATAAAATGATTTTGAGGCCAAATTGAAAGATGATTGGAGAAATAGTTATATATATTCACACACACACATATAATACAAAAGAAATGTTAATGATTTTTATTGTCTAAATAAGAACTCTTGTGGCTCAATAATAAATTCAAATGATCTATACTTACTCAAAAGAGAGATTTTTAATTCATTTGTTTTTTTATTTACTTTTCTTTTTCTTTAACTCCACTTTACTTTGTAAAGTTGAACTATTGTGACATAGATACTAATACCACTAACAATAAATTTTAAAAACAAACTATGCACGATTAACTTGAGGATACTTTGTTTGTCAGTCAGCTTATATTCTCTTATTACAT

mRNA sequence

CAACTACGAACAATCCTTCCAACGAATCAACATTTCCCTTCTTCGCTGTCGCCTCTCAATTGATCTCTCCCCTCCCTGTTCTTAAACCGGGAGAGATCCATTCCCTTTTCCATCCAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCGTCCATTTTCCTCGATCAATGGGTTGCGGAGAGTCCAAGCTTGCTATCGCCACCGCCGACGGCGTTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGACACAAAGCAGCTGATGGATCCAAGACCAGTGCTGCCGATTCGTCCGTGGCTGATTTGAAGGTTCCGTCACTGAACAAAATCGATAGCTCTGTGAAGGTTGAATCCTCGGAGAATAAAGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGATTGAACCGGAGGTTAAGATAGAGCAGACGATCGATGACGCTGTGAAGATTGAATCGGAGGAGAAGAGCGATAGCATTGTGGCGACGGAAGAAGTGAAAACAGAGGAGAGAAAAGAGAAGGAGGTCGCCGGCGACAGTGAGAAGAAGGAGAAGGAAAAGGAGGAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTAGAAGAGGGAGTTAAAGCTGTTGAGGAAAAACCGTTGGCTGGAGAAGTTGAAGAGGCAGGAATTAAATCTGTAGAGGAAAAGGAGGTTCCCGGAGAAACGAAAACGGAGAAGAAGGAAGGCGGCGCTGTTGAAGAAGGGATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGAGAGGCAGTGAAATTGAAAGAAGAAAGTGAAGCTAAGAAGGAAGAGACCCAAAGCTTAGCACCCACTCCATTACAAGACAAGAATCTCAAAGATCCCAAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAACACCAACTAAGTGATAAAATGATTTTGAGGCCAAATTGAAAGATGATTGGAGAAATAGTTATATATATTCACACACACACATATAATACAAAAGAAATGTTAATGATTTTTATTGTCTAAATAAGAACTCTTGTGGCTCAATAATAAATTCAAATGATCTATACTTACTCAAAAGAGAGATTTTTAATTCATTTGTTTTTTTATTTACTTTTCTTTTTCTTTAACTCCACTTTACTTTGTAAAGTTGAACTATTGTGACATAGATACTAATACCACTAACAATAAATTTTAAAAACAAACTATGCACGATTAACTTGAGGATACTTTGTTTGTCAGTCAGCTTATATTCTCTTATTACAT

Coding sequence (CDS)

ATGGGTTGCGGAGAGTCCAAGCTTGCTATCGCCACCGCCGACGGCGTTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGACACAAAGCAGCTGATGGATCCAAGACCAGTGCTGCCGATTCGTCCGTGGCTGATTTGAAGGTTCCGTCACTGAACAAAATCGATAGCTCTGTGAAGGTTGAATCCTCGGAGAATAAAGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGATTGAACCGGAGGTTAAGATAGAGCAGACGATCGATGACGCTGTGAAGATTGAATCGGAGGAGAAGAGCGATAGCATTGTGGCGACGGAAGAAGTGAAAACAGAGGAGAGAAAAGAGAAGGAGGTCGCCGGCGACAGTGAGAAGAAGGAGAAGGAAAAGGAGGAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTAGAAGAGGGAGTTAAAGCTGTTGAGGAAAAACCGTTGGCTGGAGAAGTTGAAGAGGCAGGAATTAAATCTGTAGAGGAAAAGGAGGTTCCCGGAGAAACGAAAACGGAGAAGAAGGAAGGCGGCGCTGTTGAAGAAGGGATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGAGAGGCAGTGAAATTGAAAGAAGAAAGTGAAGCTAAGAAGGAAGAGACCCAAAGCTTAGCACCCACTCCATTACAAGACAAGAATCTCAAAGATCCCAAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAACACCAACTAAGTGA

Protein sequence

MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKIDSSVKVESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVKIESEEKSDSIVATEEVKTEERKEKEVAGDSEKKEKEKEEEDGGNGGSVEKQVAGETKAEEKEDGVKGSEVKVEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGETKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSLAPTPLQDKNLKDPKENGGDLGVKNSTAEEKKITPTK

Homology

[Close]

BLAST of PI0023032 vs. ExPASy TrEMBL
Match: A0A0A0L8Y3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 5.5e-111
Identity = 258/309 (83.50%), Postives = 266/309 (86.08%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI TADG+LHRKKSSASRSKSG +A DGSKTS A SS ADLKVPSLNKIDSS
Sbjct: 101 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNKIDSS 160

Query: 61  VKVESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVKIESEEKSDSIVATEEVKTEER 120
           VKVESSENKVEQRDEKKIDDVAKIEPEVK EQ ID AVKIESEEKSDSIV TE VKTEER
Sbjct: 161 VKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEER 220

Query: 121 KEKEVAGDSEKKEKE------------------KEEEDGGNGGSVEKQVAGETKAEEKED 180
           KEKEVAGDSEKKEKE                  KE EDGGNGGSVEKQVAGETKAEEK++
Sbjct: 221 KEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKE 280

Query: 181 GVKGSEVKVEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGETKTEKKEGGAVEEGIKAAE 240
              GSEVKVE+GVK VEEK LAGEVE+ GIK+VE+KEV GETKTEKKEGGAVEEGIKAAE
Sbjct: 281 ---GSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAVEEGIKAAE 340

Query: 241 EKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSLAPTPLQDKNLKDPKENGGDLGVKNST 292
           EKKLAEEPKVEKQNGEAVKLKEESE KKEETQ  APTPLQDKNLKDPKENGGDL VKNST
Sbjct: 341 EKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKENGGDLEVKNST 400

[Close]

BLAST of PI0023032 vs. ExPASy TrEMBL
Match: A0A1S3AXZ0 (DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 9.0e-106
Identity = 256/313 (81.79%), Postives = 273/313 (87.22%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI+TADG+LHRKKSSASRSKSG +AADGSKT AADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  VK-VESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVK---IESEEKSDSIVATEEVK 120
           +K VESSENKVEQRDEKKIDDVAK EPEVKIEQ ID AVK   +++EEK +  VA +  K
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 TE-------ERKEKEVAGDSEKKEKE-------KEEEDGGNGGSVEKQVAGETKAEE-KE 180
            E       + KEKEV+G SEKKEKE       KE+EDGGNGGSVEKQVAGETKAEE KE
Sbjct: 121 KEVAGDSEKKEKEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEKKE 180

Query: 181 DGVKGSEVK-VEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGET-KTEKKEGGAVEEGIK 240
           DGVKGSEVK VE+GVKAVEEKPL GEVE+AGIK+ ++KEV GET KTEKKEGGAVEEGIK
Sbjct: 181 DGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEGIK 240

Query: 241 AAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSLAPTPLQDKNLKDPKENGGDLGVK 293
           AAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQS APTPLQDKNLKDPKENGGDLGVK
Sbjct: 241 AAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLGVK 300

[Close]

BLAST of PI0023032 vs. ExPASy TrEMBL
Match: A0A5A7U7H3 (DNA ligase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00520 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 7.6e-105
Identity = 257/324 (79.32%), Postives = 273/324 (84.26%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI+TADG+LHRKKSSASRSKSG +AADGSKT AADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  VK-VESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVK---IESEEKSDSIVATEEVK 120
           +K VESSENKVEQ DEKKIDDVAK EPEVKIEQ ID AVK   +++EEK +  VA +  K
Sbjct: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 TE-------ERKEKEVAGDSEKKEKE------------------KEEEDGGNGGSVEKQV 180
            E       + KEKEVAGDSEKKEKE                  KE+EDGGNGGSVEKQV
Sbjct: 121 KEVAGDSEKKEKEKEVAGDSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV 180

Query: 181 AGETKAEE-KEDGVKGSEVK-VEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGET-KTEK 240
           AGETKAEE KEDGVKGSEVK VE+GVKAVEEKPL GEVE+AGIK+ ++KEV GET KTEK
Sbjct: 181 AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK 240

Query: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSLAPTPLQDKNLKD 293
           KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQS APTPLQDKNLKD
Sbjct: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD 300

[Close]

BLAST of PI0023032 vs. ExPASy TrEMBL
Match: A0A6J1IS09 (enolase-phosphatase E1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479436 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 163/332 (49.10%), Postives = 193/332 (58.13%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADL-KVPSLNKIDS 60
           MGCGESKLA++T DGVL RKKSSA RSK+G KAA         +SV    K+ +  KID 
Sbjct: 1   MGCGESKLAVSTTDGVLLRKKSSA-RSKNGSKAAVAVVDDVKVASVKKTEKMINEEKIDG 60

Query: 61  SVKVESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVKIESEEKSDSIV------ATE 120
           SVK+ES +N  E+R+EKK D            + I   VK ESEEKSD +V      ATE
Sbjct: 61  SVKIESEKN-TEKREEKKSD-----------AEKIVGTVKFESEEKSDGVVAEVQNPATE 120

Query: 121 EVKTEERKEKEVAGDSEKKEKEKEEEDGGNGGSVEKQVAGETKAE---EKEDGVKGSEVK 180
             KTEE KEKEV  D EKKEK    EDG NGG++EKQVAGETKAE   EKE  V GS ++
Sbjct: 121 VAKTEEIKEKEVTCDGEKKEK----EDGNNGGAIEKQVAGETKAEKEKEKEAIVSGSPIE 180

Query: 181 VEEGVKAVEEKPLAGEVEEAG-------------------------------IKSVEEKE 240
           V +G K VEE+ LAGEVE+                                 IK+V+EK+
Sbjct: 181 VAQGTKPVEEQQLAGEVEQGNKPVEKKQVVGEVEQVIKPVEEKPLIGQVEQIIKTVDEKQ 240

Query: 241 VPGETKTEKKEGG------AVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEET 282
           +P ETKTEK E G       +E+ IK  EEK+LAEEPKVEKQ GEAVKLKEE++AKKEE 
Sbjct: 241 LPIETKTEKNESGDNGGSAIIEQVIKPVEEKQLAEEPKVEKQTGEAVKLKEETQAKKEE- 300

[Close]

BLAST of PI0023032 vs. ExPASy TrEMBL
Match: A0A6J1IUL2 (enolase-phosphatase E1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479436 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 7.3e-39
Identity = 153/299 (51.17%), Postives = 181/299 (60.54%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADL-KVPSLNKIDS 60
           MGCGESKLA++T DGVL RKKSSA RSK+G KAA         +SV    K+ +  KID 
Sbjct: 1   MGCGESKLAVSTTDGVLLRKKSSA-RSKNGSKAAVAVVDDVKVASVKKTEKMINEEKIDG 60

Query: 61  SVKVESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVKIESEEKSDSIV------ATE 120
           SVK+ES +N  E+R+EKK D            + I   VK ESEEKSD +V      ATE
Sbjct: 61  SVKIESEKN-TEKREEKKSD-----------AEKIVGTVKFESEEKSDGVVAEVQNPATE 120

Query: 121 EVKTEERKEKEVAGDSEKKEKEKEEEDGGNGGSVEKQVAGETKAE---EKEDGVKGSEVK 180
             KTEE KEKEV  D EKKEK    EDG NGG++EKQVAGETKAE   EKE  V GS ++
Sbjct: 121 VAKTEEIKEKEVTCDGEKKEK----EDGNNGGAIEKQVAGETKAEKEKEKEAIVSGSPIE 180

Query: 181 VEEGVKAVEEKPLAGEVEEAG-------------------------------IKSVEEKE 240
           V +G K VEE+ LAGEVE+                                 IK+V+EK+
Sbjct: 181 VAQGTKPVEEQQLAGEVEQGNKPVEKKQVVGEVEQVIKPVEEKPLIGQVEQIIKTVDEKQ 240

Query: 241 VPGETKTEKKEGG------AVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEE 253
           +P ETKTEK E G       +E+ IK  EEK+LAEEPKVEKQ GEAVKLKEE++AKKEE
Sbjct: 241 LPIETKTEKNESGDNGGSAIIEQVIKPVEEKQLAEEPKVEKQTGEAVKLKEETQAKKEE 282

[Close]

BLAST of PI0023032 vs. NCBI nr
Match: KAE8650378.1 (hypothetical protein Csa_009605 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-109
Identity = 258/320 (80.62%), Postives = 266/320 (83.12%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI TADG+LHRKKSSASRSKSG +A DGSKTS A SS ADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNKIDSS 60

Query: 61  VKVESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVKIESEEKSDSIVATEEVKTEER 120
           VKVESSENKVEQRDEKKIDDVAKIEPEVK EQ ID AVKIESEEKSDSIV TE VKTEER
Sbjct: 61  VKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEER 120

Query: 121 KEKEVAGDSEKKEKE-----------------------------KEEEDGGNGGSVEKQV 180
           KEKEVAGDSEKKEKE                             KE EDGGNGGSVEKQV
Sbjct: 121 KEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQV 180

Query: 181 AGETKAEEKEDGVKGSEVKVEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGETKTEKKEG 240
           AGETKAEEK++   GSEVKVE+GVK VEEK LAGEVE+ GIK+VE+KEV GETKTEKKEG
Sbjct: 181 AGETKAEEKKE---GSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGETKTEKKEG 240

Query: 241 GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSLAPTPLQDKNLKDPKE 292
           GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ  APTPLQDKNLKDPKE
Sbjct: 241 GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKE 300

[Close]

BLAST of PI0023032 vs. NCBI nr
Match: XP_004134472.3 (histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-109
Identity = 258/320 (80.62%), Postives = 266/320 (83.12%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI TADG+LHRKKSSASRSKSG +A DGSKTS A SS ADLKVPSLNKIDSS
Sbjct: 83  MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNKIDSS 142

Query: 61  VKVESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVKIESEEKSDSIVATEEVKTEER 120
           VKVESSENKVEQRDEKKIDDVAKIEPEVK EQ ID AVKIESEEKSDSIV TE VKTEER
Sbjct: 143 VKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEER 202

Query: 121 KEKEVAGDSEKKEKE-----------------------------KEEEDGGNGGSVEKQV 180
           KEKEVAGDSEKKEKE                             KE EDGGNGGSVEKQV
Sbjct: 203 KEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQV 262

Query: 181 AGETKAEEKEDGVKGSEVKVEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGETKTEKKEG 240
           AGETKAEEK++   GSEVKVE+GVK VEEK LAGEVE+ GIK+VE+KEV GETKTEKKEG
Sbjct: 263 AGETKAEEKKE---GSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGETKTEKKEG 322

Query: 241 GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSLAPTPLQDKNLKDPKE 292
           GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ  APTPLQDKNLKDPKE
Sbjct: 323 GAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKE 382

[Close]

BLAST of PI0023032 vs. NCBI nr
Match: XP_008438814.1 (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 393.3 bits (1009), Expect = 1.9e-105
Identity = 256/313 (81.79%), Postives = 273/313 (87.22%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI+TADG+LHRKKSSASRSKSG +AADGSKT AADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  VK-VESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVK---IESEEKSDSIVATEEVK 120
           +K VESSENKVEQRDEKKIDDVAK EPEVKIEQ ID AVK   +++EEK +  VA +  K
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 TE-------ERKEKEVAGDSEKKEKE-------KEEEDGGNGGSVEKQVAGETKAEE-KE 180
            E       + KEKEV+G SEKKEKE       KE+EDGGNGGSVEKQVAGETKAEE KE
Sbjct: 121 KEVAGDSEKKEKEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEKKE 180

Query: 181 DGVKGSEVK-VEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGET-KTEKKEGGAVEEGIK 240
           DGVKGSEVK VE+GVKAVEEKPL GEVE+AGIK+ ++KEV GET KTEKKEGGAVEEGIK
Sbjct: 181 DGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEGIK 240

Query: 241 AAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSLAPTPLQDKNLKDPKENGGDLGVK 293
           AAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQS APTPLQDKNLKDPKENGGDLGVK
Sbjct: 241 AAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLGVK 300

[Close]

BLAST of PI0023032 vs. NCBI nr
Match: KAA0049449.1 (DNA ligase 1-like [Cucumis melo var. makuwa] >TYK16128.1 DNA ligase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 390.2 bits (1001), Expect = 1.6e-104
Identity = 257/324 (79.32%), Postives = 273/324 (84.26%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI+TADG+LHRKKSSASRSKSG +AADGSKT AADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  VK-VESSENKVEQRDEKKIDDVAKIEPEVKIEQTIDDAVK---IESEEKSDSIVATEEVK 120
           +K VESSENKVEQ DEKKIDDVAK EPEVKIEQ ID AVK   +++EEK +  VA +  K
Sbjct: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 TE-------ERKEKEVAGDSEKKEKE------------------KEEEDGGNGGSVEKQV 180
            E       + KEKEVAGDSEKKEKE                  KE+EDGGNGGSVEKQV
Sbjct: 121 KEVAGDSEKKEKEKEVAGDSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV 180

Query: 181 AGETKAEE-KEDGVKGSEVK-VEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGET-KTEK 240
           AGETKAEE KEDGVKGSEVK VE+GVKAVEEKPL GEVE+AGIK+ ++KEV GET KTEK
Sbjct: 181 AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK 240

Query: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSLAPTPLQDKNLKD 293
           KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQS APTPLQDKNLKD
Sbjct: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD 300

[Close]

BLAST of PI0023032 vs. NCBI nr
Match: XP_038902432.1 (histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 2.3e-79
Identity = 222/325 (68.31%), Postives = 251/325 (77.23%), Query Frame = 0


Query: 1   MGCGESKLAIATADGVLHRKKSSASRSKSGHKAADGSKTSAADSSVADLKVPSLNKI--- 60
           MGCGESKLA+ATADG+LHRKKS A RSKSG K+ADGSK S+AD++VADLKVPS NKI   
Sbjct: 1   MGCGESKLAVATADGILHRKKSIAGRSKSGRKSADGSK-SSADAAVADLKVPSQNKIDEE 60

Query: 61  --DSSVKVESSENKVEQRDEKKI-DDVAKIEPEVKI--------EQTIDDAVKIESEEKS 120
             DS+VK+E SENK+EQR+EKKI DD AKI+ E KI        E+ ID AVK ESEEK 
Sbjct: 61  KVDSAVKIE-SENKIEQREEKKIDDDAAKIKSEKKIHDAVKIESEKKIDGAVKSESEEKI 120

Query: 121 DSI------VATEEVKTEERKEKEVAGDSEKKEKE-------KEEEDGGNGGSVEKQVAG 180
           DS+      VATE  KTEERKEKEV GDSEKKEKE       KE+E G NGGSVEKQVAG
Sbjct: 121 DSVVAEVQNVATEGGKTEERKEKEVTGDSEKKEKEATGDSEKKEKEGGDNGGSVEKQVAG 180

Query: 181 ETKAEEKEDGVKGSEVKVEEGVKAVEEKPLAGEVEEAGIKSVEEKEVPGETKTEKKEGGA 240
           ETKA EKE   +  E+ VE+ +K VEEKPL GEVE+ GIK VEEK++ GETKTEKK+GGA
Sbjct: 181 ETKA-EKEKEKEAGEIVVEQKIKPVEEKPLTGEVEQ-GIKLVEEKQLVGETKTEKKDGGA 240

Query: 241 VEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKK--------EETQSLAPTPLQDKN 291
           VE+  K AEEK+LAEEPKVEKQNGEAVKLKEE++AKK        EETQS A TPL+DKN
Sbjct: 241 VEQANKPAEEKQLAEEPKVEKQNGEAVKLKEETQAKKEEAAAPKVEETQSSA-TPLEDKN 300

The following BLAST results are available for this feature:

BLAST of PI0023032 vs.


Match Name	E-value	Identity	Description

BLAST of PI0023032 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Y3	5.5e-111	83.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1	[more]
A0A1S3AXZ0	9.0e-106	81.79	DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1	[more]
A0A5A7U7H3	7.6e-105	79.32	DNA ligase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A6J1IS09	1.1e-39	49.10	enolase-phosphatase E1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114794...	[more]
A0A6J1IUL2	7.3e-39	51.17	enolase-phosphatase E1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114794...	[more]

BLAST of PI0023032 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650378.1	2.1e-109	80.63	hypothetical protein Csa_009605 [Cucumis sativus]	[more]
XP_004134472.3	2.1e-109	80.63	histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus]	[more]
XP_008438814.1	1.9e-105	81.79	PREDICTED: DNA ligase 1-like [Cucumis melo]	[more]
KAA0049449.1	1.6e-104	79.32	DNA ligase 1-like [Cucumis melo var. makuwa] >TYK16128.1 DNA ligase 1-like [Cucu...	[more]
XP_038902432.1	2.3e-79	68.31	histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Benincasa hispid...	[more]

BLAST of PI0023032 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 232..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023032.1	PI0023032.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity