PI0022816 (gene) Melon (PI 482460) v1

Overview
NamePI0022816
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 6278026 .. 6278413 (-)
RNA-Seq ExpressionPI0022816
SyntenyPI0022816
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATGGCCAGAGATATCCTTCCCTTCGAAATCGGGGGCGGCGGCGGGGGCGAGAGCGCCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATATGCATGGGATGGAGTTTACACGGAAGAAACAGTCCGATTCATTGAAACAGAATCCGCCAAGAAAGCTCTGAGAAAGAGAAGCAAACGAAAGCTAGAACCATTCAATTGCTTTGAGTTCTTGAAACTCGTTTGGTGTTTGAAATTCTAACTCTCTTCATTCTCTTTTATTTTTCCTCTTTGTAGATCGATTGAAATATTCATATCGAATTGATGATTTTCGATCTTTTTCTTGTGCTTCGCTCGATCTCGATGCTCATTCATCGGAATTTTCCGAGCGAGGATTTTGTAATT

mRNA sequence

CGATGGCCAGAGATATCCTTCCCTTCGAAATCGGGGGCGGCGGCGGGGGCGAGAGCGCCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATATGCATGGGATGGAGTTTACACGGAAGAAACAGTCCGATTCATTGAAACAGAATCCGCCAAGAAAGCTCTGAGAAAGAGAAGCAAACGAAAGCTAGAACCATTCAATTGCTTTGAGTTCTTGAAACTCGTTTGGTGTTTGAAATTCTAACTCTCTTCATTCTCTTTTATTTTTCCTCTTTGTAGATCGATTGAAATATTCATATCGAATTGATGATTTTCGATCTTTTTCTTGTGCTTCGCTCGATCTCGATGCTCATTCATCGGAATTTTCCGAGCGAGGATTTTGTAATT

Coding sequence (CDS)

ATGGCCAGAGATATCCTTCCCTTCGAAATCGGGGGCGGCGGCGGGGGCGAGAGCGCCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATATGCATGGGATGGAGTTTACACGGAAGAAACAGTCCGATTCATTGAAACAGAATCCGCCAAGAAAGCTCTGAGAAAGAGAAGCAAACGAAAGCTAGAACCATTCAATTGCTTTGAGTTCTTGAAACTCGTTTGGTGTTTGAAATTCTAA

Protein sequence

MARDILPFEIGGGGGGESAGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSKRKLEPFNCFEFLKLVWCLKF
Homology
[Close]
BLAST of PI0022816 vs. ExPASy TrEMBL
Match: A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.5e-34
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0 

Query: 1  MARDILPFEIGGGGGGES--AGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFE GGGG GES   GDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SKRKLEPFNCFEFLKLVWCLKF 81
          S+RKLEPFNCFEFLK+VWC KF
Sbjct: 61 SRRKLEPFNCFEFLKIVWCFKF 82

[Close]
BLAST of PI0022816 vs. ExPASy TrEMBL
Match: A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.9e-32
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 0 

Query: 1  MARDILPFEIGGGGGGES--AGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFE GGGGGGES   GD+FFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGGGESERGGDVFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SKRKLEPFNCFEFLKLVWCLKF 81
          S+RKLEPFNCFEFL++V   KF
Sbjct: 61 SRRKLEPFNCFEFLRIVCSFKF 82

[Close]
BLAST of PI0022816 vs. NCBI nr
Match: KGN57263.1 (hypothetical protein Csa_009618 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 5.2e-34
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0 

Query: 1  MARDILPFEIGGGGGGES--AGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFE GGGG GES   GDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SKRKLEPFNCFEFLKLVWCLKF 81
          S+RKLEPFNCFEFLK+VWC KF
Sbjct: 61 SRRKLEPFNCFEFLKIVWCFKF 82

[Close]
BLAST of PI0022816 vs. NCBI nr
Match: KAA0067665.1 (hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669.1 hypothetical protein E5676_scaffold577G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 0 

Query: 1  MARDILPFEIGGGGGGES--AGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFE GGGGGGES   GD+FFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGGGESERGGDVFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SKRKLEPFNCFEFLKLVWCLKF 81
          S+RKLEPFNCFEFL++V   KF
Sbjct: 61 SRRKLEPFNCFEFLRIVCSFKF 82

[Close]
BLAST of PI0022816 vs. NCBI nr
Match: KAG6576802.1 (hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014829.1 hypothetical protein SDJN02_22458, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.9 bits (302), Expect = 4.9e-24
Identity = 59/89 (66.29%), Postives = 66/89 (74.16%), Query Frame = 0 

Query: 1  MARDILPFEIGGGGGGES---------AGDIFFGKDDMKEYAWDGVYTEETVRFIETESA 60
          MARD LP+E G GGGG+S          GDIFFGKDDMK Y WD V+TEETVRF+ETESA
Sbjct: 1  MARDTLPYEFGVGGGGKSCSSPSKYDVVGDIFFGKDDMKGYVWDEVFTEETVRFLETESA 60

Query: 61 KKALRKRSKRKLEPFNCFEFLKLVWCLKF 81
           + LRKRSKR+LE F CFEFLK +WC  F
Sbjct: 61 VEVLRKRSKRRLETFKCFEFLKFLWCFNF 89

[Close]
BLAST of PI0022816 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-09
Identity = 42/97 (43.30%), Postives = 52/97 (53.61%), Query Frame = 0 

Query: 1  MARDILPFEIGGGGGG--------------ESAGDIFFGKDDMKEYAWDGVYTEETVRFI 60
          MA D  PFE GG G G              +  GDIFFGKDDMKEYAWDG +TE+TVRFI
Sbjct: 1  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFI 60

Query: 61 ETESAKKALRKRSKRKLEPFN-------CFEFLKLVW 77
          ET   ++      KR  EP +       C +F + ++
Sbjct: 61 ET--VRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIY 95

[Close]
BLAST of PI0022816 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-09
Identity = 40/81 (49.38%), Postives = 46/81 (56.79%), Query Frame = 0 

Query: 1  MARDILPFEIGGGGGG--------------ESAGDIFFGKDDMKEYAWDGVYTEETVRFI 60
          MA D  PFE GG G G              +  GDIFFGKDDMKEYAWDG +TE+TVRFI
Sbjct: 1  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFI 60

Query: 61 ETESAKKALRKRSKRKLEPFN 68
          ET   ++      KR  EP +
Sbjct: 61 ET--VRRFSTVNVKRSSEPLS 79

The following BLAST results are available for this feature:
BLAST of PI0022816 vs.
Match NameE-valueIdentityDescription
BLAST of PI0022816 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6582.5e-3490.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1[more]
A0A5D3DK726.9e-3286.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0022816 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57263.15.2e-3490.24hypothetical protein Csa_009618 [Cucumis sativus][more]
KAA0067665.11.4e-3186.59hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669... [more]
KAG6576802.14.9e-2466.29hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7030840.14.4e-0943.30hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600176.14.4e-0949.38hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of PI0022816 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0022816.1PI0022816.1mRNA