PI0022677 (gene) Melon (PI 482460) v1

Overview
NamePI0022677
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Locationchr01: 8444149 .. 8445237 (+)
RNA-Seq ExpressionPI0022677
SyntenyPI0022677
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCTTTCTCCAACACTTACAACCCTAGTTGGAGAAACCATCCTGACTTTGGCTGGGGAGGAACGGGTCAACAAAATCAAGGGCGACATAGTGGTCAAGGTGACCATCGCGGGGAAGCATCTGGCTCCCACGCGAGGTACCACAACAACAGACCCCAACACTCCCATCATCAACAGCAACCCACCACTACTACTCCATCCACTTCTTCATCCGTGGAGAACCTCCTCCGCGAATACATACAGAAAAATGATGCCCTTCTGCAAAGCCAAGTTTCATCAATTCGCAATCTAGAAGTACAATTAGGGCAGCTAGCCAGCGACTTCTCCGGAAGACCACCAGGATCCCTCCCAAGTAATACAGAAACACCAAACCAGGCGGGGGGATCTGGAAAAGAGAAGTGTCACGCGGTGACACTACGCAGCGGAAGGAATCTGACCATCCGCGATCCTGAAACCGAACGTAGCAACCCCACTTCTCATTCTACTACCGAGGTTGGCAGCTCAAGTAACATTCCTAATCTTGTACATTTCTCTTTAACTAACAATATTTCTTCCTCGCAGAATAAAGACGTGCCAAGCAAGGGCATGGAGAGCACGGGGCAACGTGATCAACGGAGTGAAGCGTCTCAACAGGCGACGAGCTCAACACCTTTACCGCCTCCTCCATTTCCTGGTCGCCTAAAGAAGAAAGGCGACGAACAACAGTTTCAAAAGTTCTTCGACGTCCTGAAGCAACTTCACATCAACATCCCGTTCGTTGATGTGTTAGAGCAAGTGCCTGATAACTCGTATAAATATAAGTTATTATAGCCTTTTAGGCGAAACAAGGTGGGTTAAGCGCGGAATAAATGGTGTAAATGCGTAGATTGTAGTGCAAATCTGTAATAATTTAAGAATGAGCTTCGCATAAGGCATATTGCGTGTTTAATTGTGTTTTAAGTGTTTTTGCACGTAGAAAGAAGGCGAAGAGAGGATTACTAGGCGATCAACATTGCAGTTAGGCGTTCAAAAGACCATCTGGCGAACAACCAGCACATCACTATGCGATGCTGACGCACTTAGAGACAAGAATGGTAGTTGGAGATGA

mRNA sequence

ATGACCCTTTCTCCAACACTTACAACCCTAGTTGGAGAAACCATCCTGACTTTGGCTGGGGAGGAACGGGTCAACAAAATCAAGGGCGACATAGTGGTCAAGGTGACCATCGCGGGGAAGCATCTGGCTCCCACGCGAGCCAGCGACTTCTCCGGAAGACCACCAGGATCCCTCCCAAGTAATACAGAAACACCAAACCAGGCGGGGGGATCTGGAAAAGAGAAGTGTCACGCGGTGACACTACGCAGCGGAAGGAATCTGACCATCCGCGATCCTGAAACCGAACGTAGCAACCCCACTTCTCATTCTACTACCGAGAATAAAGACGTGCCAAGCAAGGGCATGGAGAGCACGGGGCAACGTGATCAACGGAGTGAAGCGTCTCAACAGGCGACGAGCTCAACACCTTTACCGCCTCCTCCATTTCCTGGTCGCCTAAAGAAGAAAGGCGACGAACAACAGTTTCAAAAGTTCTTCGACGTCCTGAAGCAACTTCACATCAACATCCCGTTCGTTGATGTGTTAGAGCAAAAAGAAGGCGAAGAGAGGATTACTAGGCGATCAACATTGCAGTTAGGCGTTCAAAAGACCATCTGGCGAACAACCAGCACATCACTATGCGATGCTGACGCACTTAGAGACAAGAATGGTAGTTGGAGATGA

Coding sequence (CDS)

ATGACCCTTTCTCCAACACTTACAACCCTAGTTGGAGAAACCATCCTGACTTTGGCTGGGGAGGAACGGGTCAACAAAATCAAGGGCGACATAGTGGTCAAGGTGACCATCGCGGGGAAGCATCTGGCTCCCACGCGAGCCAGCGACTTCTCCGGAAGACCACCAGGATCCCTCCCAAGTAATACAGAAACACCAAACCAGGCGGGGGGATCTGGAAAAGAGAAGTGTCACGCGGTGACACTACGCAGCGGAAGGAATCTGACCATCCGCGATCCTGAAACCGAACGTAGCAACCCCACTTCTCATTCTACTACCGAGAATAAAGACGTGCCAAGCAAGGGCATGGAGAGCACGGGGCAACGTGATCAACGGAGTGAAGCGTCTCAACAGGCGACGAGCTCAACACCTTTACCGCCTCCTCCATTTCCTGGTCGCCTAAAGAAGAAAGGCGACGAACAACAGTTTCAAAAGTTCTTCGACGTCCTGAAGCAACTTCACATCAACATCCCGTTCGTTGATGTGTTAGAGCAAAAAGAAGGCGAAGAGAGGATTACTAGGCGATCAACATTGCAGTTAGGCGTTCAAAAGACCATCTGGCGAACAACCAGCACATCACTATGCGATGCTGACGCACTTAGAGACAAGAATGGTAGTTGGAGATGA

Protein sequence

MTLSPTLTTLVGETILTLAGEERVNKIKGDIVVKVTIAGKHLAPTRASDFSGRPPGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNLTIRDPETERSNPTSHSTTENKDVPSKGMESTGQRDQRSEASQQATSSTPLPPPPFPGRLKKKGDEQQFQKFFDVLKQLHINIPFVDVLEQKEGEERITRRSTLQLGVQKTIWRTTSTSLCDADALRDKNGSWR
Homology
BLAST of PI0022677 vs. ExPASy TrEMBL
Match: A0A5A7TGS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00540 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 7.9e-22
Identity = 68/132 (51.52%), Postives = 81/132 (61.36%), Query Frame = 0

Query: 48  SDFSGRPPGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNLTIRDPETERSNPTSHSTT-- 107
           S+ S RP GSLPSNTETPNQ GGSGKEKC  VTLRS RNLTIR+P+ ER N TS STT  
Sbjct: 50  SNISRRPKGSLPSNTETPNQVGGSGKEKCQVVTLRSRRNLTIREPKFERRNSTSTSTTKI 109

Query: 108 ---------------------ENKDVPSKGMESTGQRDQRSEASQQATSSTPLPPPPFPG 157
                                +NK++P+K +EST + +QR E S + TSS PL  PPF G
Sbjct: 110 GSASNDSNPLNSSLTNNTSSLQNKNIPNKEVESTRREEQRDEESHETTSSNPLSSPPFLG 169

BLAST of PI0022677 vs. ExPASy TrEMBL
Match: A0A5D3BIU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00430 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-18
Identity = 60/111 (54.05%), Postives = 68/111 (61.26%), Query Frame = 0

Query: 66  NQAGGSGKEKCHAVTLRSGRNLTIRDPETERSNPTSHSTTENKDVPSKGMESTGQRDQRS 125
           NQ GGS KE C  VTLRS RNLTIR P+ ER NPT  ST E  ++ +  + S        
Sbjct: 3   NQEGGSRKENCQEVTLRSRRNLTIRKPDPERKNPTFTSTVEIANLINNFIPS------NF 62

Query: 126 EASQQATSSTPLPPPPFPGRLKKKGDEQQFQKFFDVLKQLHINIPFVDVLE 177
             +  A S  PL PPPFP RLKKKGD Q+F  F D+ KQLHINI F D LE
Sbjct: 63  SFTNDAISLNPLLPPPFPDRLKKKGDNQEFYNFLDIPKQLHINISFADALE 107

BLAST of PI0022677 vs. ExPASy TrEMBL
Match: A0A5D3BAB3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00460 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.0e-18
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 0

Query: 99  PTSHSTTENKDVPSKGMESTGQRDQRSEASQQATSSTPLPPPPFPGRLKKKGDEQQFQKF 158
           P    T +N +VP+K +EST Q +Q  +AS QATSST LPPPPFPGRLKKKGD+QQF K 
Sbjct: 3   PIRTLTMQNNNVPNKEVESTRQDEQCGKASTQATSSTALPPPPFPGRLKKKGDDQQFYKL 62

Query: 159 FDVLKQLHINIPFVDVLEQ 178
            D+LKQL+INIPFVD L+Q
Sbjct: 63  LDILKQLYINIPFVDALKQ 81

BLAST of PI0022677 vs. ExPASy TrEMBL
Match: A0A5A7UFN5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00130 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-15
Identity = 58/113 (51.33%), Postives = 68/113 (60.18%), Query Frame = 0

Query: 65  PNQAGGSGKEKCHAVTLRSGRNLTIRDPETERSNPTSHSTTENKDVPSKGMESTGQRDQR 124
           P++AG S K+ C  VTLRSGRNLTI +P ++R N TS S   N D P  G     QR   
Sbjct: 2   PSKAGRSRKDHCQVVTLRSGRNLTIHEPNSKRRNSTSTSNV-NNDTPRSGEYHARQRTLD 61

Query: 125 SEASQQATSSTPLPPPPFPGRLKKKGDEQQFQKFFDVLKQLHINIPFVDVLEQ 178
              S+            FPGRLKKKGD+QQF+KF DVL QL INI FV+ LEQ
Sbjct: 62  GIESKHHLRILHYLFLHFPGRLKKKGDKQQFKKFLDVLNQLQINILFVNALEQ 113

BLAST of PI0022677 vs. ExPASy TrEMBL
Match: A0A5D3CE56 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00350 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 58/120 (48.33%), Postives = 67/120 (55.83%), Query Frame = 0

Query: 69  GGSGKEKCHAVTLRSGRNLTIRDPETERSNPTSHSTTE---------------------- 128
           G S KEK   VTLRSGRNLTIR P++E  NPTS STTE                      
Sbjct: 114 GASRKEKGQVVTLRSGRNLTIRKPDSECRNPTSASTTEIDSSSKNSQASNFSLINDASSL 173

Query: 129 -NKDVPSKGMESTGQRDQRSEASQQATSSTPLPPPPFPGRLKKKGDEQQFQKFFDVLKQL 166
            N + P+K +EST + + R EAS Q  SS PL PPPFPGRLKKK   QQF K  + +  L
Sbjct: 174 QNNNEPNKEVESTRREEPRGEASNQMMSSNPLSPPPFPGRLKKKTYNQQFAKVLEKMTNL 233

BLAST of PI0022677 vs. NCBI nr
Match: KAA0041246.1 (uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa] >TYK16045.1 uncharacterized protein E5676_scaffold32G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-21
Identity = 68/132 (51.52%), Postives = 81/132 (61.36%), Query Frame = 0

Query: 48  SDFSGRPPGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNLTIRDPETERSNPTSHSTT-- 107
           S+ S RP GSLPSNTETPNQ GGSGKEKC  VTLRS RNLTIR+P+ ER N TS STT  
Sbjct: 50  SNISRRPKGSLPSNTETPNQVGGSGKEKCQVVTLRSRRNLTIREPKFERRNSTSTSTTKI 109

Query: 108 ---------------------ENKDVPSKGMESTGQRDQRSEASQQATSSTPLPPPPFPG 157
                                +NK++P+K +EST + +QR E S + TSS PL  PPF G
Sbjct: 110 GSASNDSNPLNSSLTNNTSSLQNKNIPNKEVESTRREEQRDEESHETTSSNPLSSPPFLG 169

BLAST of PI0022677 vs. NCBI nr
Match: TYJ99662.1 (uncharacterized protein E5676_scaffold562G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 6.5e-18
Identity = 60/111 (54.05%), Postives = 68/111 (61.26%), Query Frame = 0

Query: 66  NQAGGSGKEKCHAVTLRSGRNLTIRDPETERSNPTSHSTTENKDVPSKGMESTGQRDQRS 125
           NQ GGS KE C  VTLRS RNLTIR P+ ER NPT  ST E  ++ +  + S        
Sbjct: 3   NQEGGSRKENCQEVTLRSRRNLTIRKPDPERKNPTFTSTVEIANLINNFIPS------NF 62

Query: 126 EASQQATSSTPLPPPPFPGRLKKKGDEQQFQKFFDVLKQLHINIPFVDVLE 177
             +  A S  PL PPPFP RLKKKGD Q+F  F D+ KQLHINI F D LE
Sbjct: 63  SFTNDAISLNPLLPPPFPDRLKKKGDNQEFYNFLDIPKQLHINISFADALE 107

BLAST of PI0022677 vs. NCBI nr
Match: KAA0039667.1 (uncharacterized protein E6C27_scaffold744G001580 [Cucumis melo var. makuwa] >TYJ95551.1 uncharacterized protein E5676_scaffold767G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-17
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 0

Query: 99  PTSHSTTENKDVPSKGMESTGQRDQRSEASQQATSSTPLPPPPFPGRLKKKGDEQQFQKF 158
           P    T +N +VP+K +EST Q +Q  +AS QATSST LPPPPFPGRLKKKGD+QQF K 
Sbjct: 3   PIRTLTMQNNNVPNKEVESTRQDEQCGKASTQATSSTALPPPPFPGRLKKKGDDQQFYKL 62

Query: 159 FDVLKQLHINIPFVDVLEQ 178
            D+LKQL+INIPFVD L+Q
Sbjct: 63  LDILKQLYINIPFVDALKQ 81

BLAST of PI0022677 vs. NCBI nr
Match: XP_038894636.1 (uncharacterized protein LOC120083133 [Benincasa hispida])

HSP 1 Score: 98.6 bits (244), Expect = 7.1e-17
Identity = 59/131 (45.04%), Postives = 78/131 (59.54%), Query Frame = 0

Query: 47  ASDFSGRPPGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNLTIRDPETERSNPTSHSTTE 106
           AS+   R PG LPSNTETP      GK++CHAVTLRSGR L  R      S+P     T 
Sbjct: 70  ASELKNRQPGVLPSNTETP--GNNDGKKQCHAVTLRSGRALEKRRMNPRNSSPLKERITR 129

Query: 107 NKDVPSKGMESTGQRDQRSEASQQATSSTPLPPPPFPGRLKKKGDEQQFQKFFDVLKQLH 166
           + D   + +E+T   +    ++  A +S      PFP RL KK DEQ+F++F ++LKQLH
Sbjct: 130 SMDQEERTLETTSHSE---PSTSNAGNSEVTLNTPFPRRLMKKNDEQKFKRFLELLKQLH 189

Query: 167 INIPFVDVLEQ 178
           INIP ++ LEQ
Sbjct: 190 INIPLIEALEQ 195

BLAST of PI0022677 vs. NCBI nr
Match: XP_024021730.1 (uncharacterized protein LOC112091702 [Morus notabilis])

HSP 1 Score: 95.1 bits (235), Expect = 7.9e-16
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 0

Query: 47  ASDFSGRPPGSLPSNTETPNQAGGSGKEKCHAVTLRSGRNLTIRD-PETERSNPTSHSTT 106
           A+  + RP GSLPSNTE P +    GKE C A++LRSG+ L  R  P+  ++ PTS    
Sbjct: 346 ANSLNNRPQGSLPSNTEDPRR---EGKEHCKAISLRSGKELDPRTRPQAVQTEPTSIQEE 405

Query: 107 E----------NKDVPSKGMESTGQRDQRSEASQQATSSTPLPPPPFPGRLKKKGDEQQF 166
           E           K  P+  +++     Q S  +  + SS+  PPPPFP R +++  + QF
Sbjct: 406 EQQTQPQEEQRRKQQPNSDVQNAASFPQHSGVADTSNSSSNRPPPPFPRRFQRQQQDGQF 465

Query: 167 QKFFDVLKQLHINIPFVDVLEQ 178
            KF DVLKQLHINIP V+ LE+
Sbjct: 466 HKFLDVLKQLHINIPLVEALEK 484

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TGS27.9e-2251.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BIU03.1e-1854.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BAB37.0e-1865.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UFN57.2e-1551.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CE562.1e-1448.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0041246.11.6e-2151.52uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa] >TYK... [more]
TYJ99662.16.5e-1854.05uncharacterized protein E5676_scaffold562G00430 [Cucumis melo var. makuwa][more]
KAA0039667.11.4e-1765.82uncharacterized protein E6C27_scaffold744G001580 [Cucumis melo var. makuwa] >TYJ... [more]
XP_038894636.17.1e-1745.04uncharacterized protein LOC120083133 [Benincasa hispida][more]
XP_024021730.17.9e-1641.55uncharacterized protein LOC112091702 [Morus notabilis][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0022677.1PI0022677.1mRNA