PI0022609 (gene) Melon (PI 482460) v1

Overview


Name	PI0022609
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	30S ribosomal protein S7, chloroplastic
Location	chr01: 13074650 .. 13075139 (-)
RNA-Seq Expression	PI0022609
Synteny	PI0022609

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCAACAACCCACACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACATGGAAAAAATCATTGACTTATCAAATTATCTATCGAGCCATGAAAAGATTCAACAAAAGACAGAAAAAAATCCACTATCTGTTTTACGTCAAGCAATACATGGAGTAAATCCCGATATAGCAGTAAAGGCAAAACGTTGAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCATTGGTTATTGGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCAATGCCATACGTAAAAAGGAAGAGACTCACAGATTATTCGTTGGTAGAATGGAAAGAATTAGGCGAAGAAGGATCCGTAGGTAA

mRNA sequence

ATGCCTCAACAACCCACACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGATTCAACAAAAGACAGAAAAAAATCCACTATCTGTTTTACGTCAAGCAATACATGGAGTAAATCCCGATATAGCAGTAAAGGCAAAACGATCCACACAAGGAAAAGCACTTGCCATTCATTGGTTATTGGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCAATGCCATACGTAAAAAGGAAGAGACTCACAGATTATTCGTTGGTAGAATGGAAAGAATTAGGCGAAGAAGGATCCGTAGGTAA

Coding sequence (CDS)

ATGCCTCAACAACCCACACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGATTCAACAAAAGACAGAAAAAAATCCACTATCTGTTTTACGTCAAGCAATACATGGAGTAAATCCCGATATAGCAGTAAAGGCAAAACGATCCACACAAGGAAAAGCACTTGCCATTCATTGGTTATTGGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCAATGCCATACGTAAAAAGGAAGAGACTCACAGATTATTCGTTGGTAGAATGGAAAGAATTAGGCGAAGAAGGATCCGTAGGTAA

Protein sequence

MPQQPTRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKRSTQGKALAIHWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRLFVGRMERIRRRRIRR

Homology

[Close]

BLAST of PI0022609 vs. ExPASy Swiss-Prot
Match: A4QJG0 (30S ribosomal protein S7, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-41
Identity = 98/143 (68.53%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. ExPASy Swiss-Prot
Match: A4QJP4 (30S ribosomal protein S7, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-41
Identity = 98/143 (68.53%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. ExPASy Swiss-Prot
Match: A4QK64 (30S ribosomal protein S7, chloroplastic OS=Arabis hirsuta OX=78191 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-41
Identity = 98/143 (68.53%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. ExPASy Swiss-Prot
Match: P61841 (30S ribosomal protein S7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps7-A PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-41
Identity = 98/143 (68.53%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. ExPASy Swiss-Prot
Match: A4QKF1 (30S ribosomal protein S7, chloroplastic OS=Barbarea verna OX=50458 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-41
Identity = 98/143 (68.53%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. ExPASy TrEMBL
Match: A0A445AH05 (Ribosomal_S7 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B02g059661 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.9e-42
Identity = 97/120 (80.83%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR----- 65
           +RRGT EEK AKSDPIYRNRLVNMLIQQKTE NPLSVLRQAI GV PDIAVKA+R     
Sbjct: 2   SRRGTVEEKTAKSDPIYRNRLVNMLIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGST 61

Query: 66  --------STQGKALAIHWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL 113
                   STQGKALAI WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Sbjct: 62  HQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM 121

[Close]

BLAST of PI0022609 vs. ExPASy TrEMBL
Match: A0A1Y3BXG4 (Putative ribosomal protein S7 domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr00c0349g0574011 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.6e-41
Identity = 96/120 (80.00%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR----- 65
           +RRGTAEEK AKSDPIYRNRLVNMLIQQKTE NPLSVLRQAIHGV P IAVKA+R     
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLIQQKTETNPLSVLRQAIHGVTPGIAVKARRVGGST 61

Query: 66  --------STQGKALAIHWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL 113
                   STQGKALAI WLL ASRKRPGRNMAFKLSSELVDAAKGSG+AIRK+EETHR+
Sbjct: 62  HQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKLSSELVDAAKGSGDAIRKREETHRM 121

[Close]

BLAST of PI0022609 vs. ExPASy TrEMBL
Match: A0A445EEJ8 (Ribosomal_S7 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g008535 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39
Identity = 93/120 (77.50%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR----- 65
           +RRGT EEK AKSDPIYRN+LVNMLIQQKTE NPLSVLRQAI GV PDIAVKA+      
Sbjct: 2   SRRGTVEEKTAKSDPIYRNQLVNMLIQQKTETNPLSVLRQAIRGVTPDIAVKARHVGGST 61

Query: 66  --------STQGKALAIHWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL 113
                   STQGKALAI WLLGASRK PGRNMAFKLSSELVDA KGSG+AIRKKEETHR+
Sbjct: 62  HQVSIEIGSTQGKALAIRWLLGASRKHPGRNMAFKLSSELVDAVKGSGDAIRKKEETHRM 121

[Close]

BLAST of PI0022609 vs. ExPASy TrEMBL
Match: A0A143FVU5 (Ribosomal protein S7 OS=Pigafetta elata OX=93304 GN=rps7 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.2e-39
Identity = 99/143 (69.23%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRIMKHGKKSLAYQIIYRAVKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAIHGV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIHGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. ExPASy TrEMBL
Match: A0A143FX40 (Ribosomal protein S7 OS=Brahea brandegeei OX=674193 GN=rps7 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.2e-39
Identity = 99/143 (69.23%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRIMKHGKKSLAYQIIYRAVKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAIHGV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIHGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. NCBI nr
Match: RYR25695.1 (hypothetical protein Ahy_B02g059661 [Arachis hypogaea])

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-41
Identity = 97/120 (80.83%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR----- 65
           +RRGT EEK AKSDPIYRNRLVNMLIQQKTE NPLSVLRQAI GV PDIAVKA+R     
Sbjct: 2   SRRGTVEEKTAKSDPIYRNRLVNMLIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGST 61

Query: 66  --------STQGKALAIHWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL 113
                   STQGKALAI WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Sbjct: 62  HQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM 121

[Close]

BLAST of PI0022609 vs. NCBI nr
Match: OTF84493.1 (putative ribosomal protein S7 domain protein [Helianthus annuus])

HSP 1 Score: 177.9 bits (450), Expect = 5.3e-41
Identity = 96/120 (80.00%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR----- 65
           +RRGTAEEK AKSDPIYRNRLVNMLIQQKTE NPLSVLRQAIHGV P IAVKA+R     
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLIQQKTETNPLSVLRQAIHGVTPGIAVKARRVGGST 61

Query: 66  --------STQGKALAIHWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL 113
                   STQGKALAI WLL ASRKRPGRNMAFKLSSELVDAAKGSG+AIRK+EETHR+
Sbjct: 62  HQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKLSSELVDAAKGSGDAIRKREETHRM 121

[Close]

BLAST of PI0022609 vs. NCBI nr
Match: RYR73952.1 (hypothetical protein Ahy_A02g008535 [Arachis hypogaea])

HSP 1 Score: 172.6 bits (436), Expect = 2.2e-39
Identity = 93/120 (77.50%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR----- 65
           +RRGT EEK AKSDPIYRN+LVNMLIQQKTE NPLSVLRQAI GV PDIAVKA+      
Sbjct: 2   SRRGTVEEKTAKSDPIYRNQLVNMLIQQKTETNPLSVLRQAIRGVTPDIAVKARHVGGST 61

Query: 66  --------STQGKALAIHWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL 113
                   STQGKALAI WLLGASRK PGRNMAFKLSSELVDA KGSG+AIRKKEETHR+
Sbjct: 62  HQVSIEIGSTQGKALAIRWLLGASRKHPGRNMAFKLSSELVDAVKGSGDAIRKKEETHRM 121

[Close]

BLAST of PI0022609 vs. NCBI nr
Match: AAN31973.1 (ribosomal protein S7 [Narthecium ossifragum])

HSP 1 Score: 171.0 bits (432), Expect = 6.5e-39
Identity = 99/143 (69.23%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAIHGV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIHGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. NCBI nr
Match: YP_003540977.1 (30S ribosomal protein S7 [Phoenix dactylifera] >YP_003540993.1 30S ribosomal protein S7 [Phoenix dactylifera] >YP_006073150.1 ribosomal protein S7 [Elaeis guineensis] >YP_006073163.1 ribosomal protein S7 [Elaeis guineensis] >YP_007475835.1 ribosomal protein S7 [Pseudophoenix vinifera] >YP_007475848.1 ribosomal protein S7 [Pseudophoenix vinifera] >YP_007475921.1 ribosomal protein S7 [Calamus caryotoides] >YP_007475934.1 ribosomal protein S7 [Calamus caryotoides] >YP_007476007.1 ribosomal protein S7 [Bismarckia nobilis] >YP_007476020.1 ribosomal protein S7 [Bismarckia nobilis] >YP_008578331.1 ribosomal protein S7 [Cocos nucifera] >YP_008578344.1 ribosomal protein S7 [Cocos nucifera] >YP_009120963.1 ribosomal protein S7 [Sabal domingensis] >YP_009120976.1 ribosomal protein S7 [Sabal domingensis] >YP_009145150.1 ribosomal protein S7 [Podococcus barteri] >YP_009145166.1 ribosomal protein S7 [Podococcus barteri] >YP_009170223.1 ribosomal protein S7 [Colpothrinax cookii] >YP_009170236.1 ribosomal protein S7 [Colpothrinax cookii] >YP_009229427.1 ribosomal protein S7 [Syagrus coronata] >YP_009229440.1 ribosomal protein S7 [Syagrus coronata] >YP_009247198.1 ribosomal protein S7 [Caryota mitis] >YP_009247211.1 ribosomal protein S7 [Caryota mitis] >YP_009247283.1 ribosomal protein S7 [Wallichia densiflora] >YP_009247296.1 ribosomal protein S7 [Wallichia densiflora] >YP_009247369.1 ribosomal protein S7 [Veitchia arecina] >YP_009247382.1 ribosomal protein S7 [Veitchia arecina] >YP_009247455.1 ribosomal protein S7 [Trithrinax brasiliensis] >YP_009247469.1 ribosomal protein S7 [Trithrinax brasiliensis] >YP_009247548.1 ribosomal protein S7 [Tahina spectabilis] >YP_009247621.1 ribosomal protein S7 [Serenoa repens] >YP_009247634.1 ribosomal protein S7 [Serenoa repens] >YP_009247707.1 ribosomal protein S7 [Salacca ramosiana] >YP_009247720.1 ribosomal protein S7 [Salacca ramosiana] >YP_009247793.1 ribosomal protein S7 [Pritchardia thurstonii] >YP_009247806.1 ribosomal protein S7 [Pritchardia thurstonii] >YP_009247879.1 ribosomal protein S7 [Pigafetta elata] >YP_009247893.1 ribosomal protein S7 [Pigafetta elata] >YP_009247966.1 ribosomal protein S7 [Phytelephas aequatorialis] >YP_009247979.1 ribosomal protein S7 [Phytelephas aequatorialis] >YP_009248052.1 ribosomal protein S7 [Nypa fruticans] >YP_009248065.1 ribosomal protein S7 [Nypa fruticans] >YP_009248138.1 ribosomal protein S7 [Metroxylon warburgii] >YP_009248151.1 ribosomal protein S7 [Metroxylon warburgii] >YP_009248310.1 ribosomal protein S7 [Leucothrinax morrisii] >YP_009248323.1 ribosomal protein S7 [Leucothrinax morrisii] >YP_009248736.1 ribosomal protein S7 [Chuniophoenix nana] >YP_009248749.1 ribosomal protein S7 [Chuniophoenix nana] >YP_009248822.1 ribosomal protein S7 [Chamaerops humilis] >YP_009248835.1 ribosomal protein S7 [Chamaerops humilis] >YP_009248908.1 ribosomal protein S7 [Brahea brandegeei] >YP_009248921.1 ribosomal protein S7 [Brahea brandegeei] >YP_009248994.1 ribosomal protein S7 [Borassodendron machadonis] >YP_009249007.1 ribosomal protein S7 [Borassodendron machadonis] >YP_009249166.1 ribosomal protein S7 [Arenga caudata] >YP_009249179.1 ribosomal protein S7 [Arenga caudata] >YP_009249251.1 ribosomal protein S7 [Areca vestiaria] >YP_009249331.1 ribosomal protein S7 [Acoelorraphe wrightii] >YP_009249344.1 ribosomal protein S7 [Acoelorraphe wrightii] >YP_009249417.1 ribosomal protein S7 [Washingtonia robusta] >YP_009249430.1 ribosomal protein S7 [Washingtonia robusta] >YP_009466753.1 ribosomal protein S7 [Acrocomia aculeata] >YP_009466766.1 ribosomal protein S7 [Acrocomia aculeata] >YP_009687433.1 ribosomal protein S7 [Astrocaryum murumuru] >YP_009687447.1 ribosomal protein S7 [Astrocaryum murumuru] >YP_009687520.1 ribosomal protein S7 [Astrocaryum aculeatum] >YP_009687534.1 ribosomal protein S7 [Astrocaryum aculeatum] >YP_009706875.1 ribosomal protein S7 [Brahea aculeata] >YP_009706888.1 ribosomal protein S7 [Brahea aculeata] >YP_009706961.1 ribosomal protein S7 [Brahea armata] >YP_009706974.1 ribosomal protein S7 [Brahea armata] >YP_009707047.1 ribosomal protein S7 [Brahea edulis] >YP_009707060.1 ribosomal protein S7 [Brahea edulis] >YP_009707133.1 ribosomal protein S7 [Brahea sarukhanii] >YP_009707146.1 ribosomal protein S7 [Brahea sarukhanii] >YP_009728780.1 ribosomal protein S7 [Arenga pinnata] >YP_009728793.1 ribosomal protein S7 [Arenga pinnata] >YP_009731181.1 ribosomal protein S7 [Archontophoenix alexandrae] >YP_009731194.1 ribosomal protein S7 [Archontophoenix alexandrae] >YP_009915230.1 ribosomal protein S7 [Areca catechu] >YP_009915243.1 ribosomal protein S7 [Areca catechu] >YP_009946004.1 ribosomal protein S7 [Phoenix canariensis] >YP_009946017.1 ribosomal protein S7 [Phoenix canariensis] >YP_010010664.1 ribosomal protein S7 [Trachycarpus fortunei] >YP_010010677.1 ribosomal protein S7 [Trachycarpus fortunei] >YP_010042205.1 ribosomal protein S7 [Caryota obtusa] >YP_010042218.1 ribosomal protein S7 [Caryota obtusa] >XP_038974454.1 30S ribosomal protein S7, chloroplastic [Phoenix dactylifera] >XP_038982754.1 30S ribosomal protein S7, chloroplastic [Phoenix dactylifera] >AAN32009.1 ribosomal protein S7 [Roystonea princeps] >ABU85325.1 ribosomal protein S7, partial [Elaeis oleifera] >AFG25710.1 ribosomal protein S7, partial [Ravenea hildebrandtii] >AKF00140.1 ribosomal protein S7 [Orania palindan] >AKF00215.1 ribosomal protein S7 [Pelagodoxa henryana] >AKF00349.1 ribosomal protein S7 [Prestoea acuminata var. montana] >AKF00482.1 ribosomal protein S7 [Reinhardtia latisecta] >AKF00544.1 ribosomal protein S7 [Roystonea regia] >AKF00620.1 ribosomal protein S7 [Reinhardtia paiewonskiana] >AKF00682.1 ribosomal protein S7 [Reinhardtia simplex] >AKF00746.1 ribosomal protein S7 [Satakentia liukiuensis] >AKF00816.1 ribosomal protein S7 [Sclerosperma profizianum] >AKF00883.1 ribosomal protein S7 [Veitchia spiralis] >AKF01042.1 ribosomal protein S7 [Attalea speciosa] >AKF01118.1 ribosomal protein S7 [Bactris major] >AKF01191.1 ribosomal protein S7 [Beccariophoenix madagascariensis] >AKF01277.1 ribosomal protein S7 [Burretiokentia grandiflora] >AKF01341.1 ribosomal protein S7 [Dictyosperma album] >AKF01414.1 ribosomal protein S7 [Drymophloeus litigiosus] >AKF01491.1 ribosomal protein S7 [Dypsis decaryi] >AKF01650.1 ribosomal protein S7 [Heterospathe cagayanensis] >AKF01729.1 ribosomal protein S7 [Hydriastele microspadix] >AKF01812.1 ribosomal protein S7 [Iriartea deltoidea] >AKF01896.1 ribosomal protein S7 [Kentiopsis piersoniorum] >AKF01959.1 ribosomal protein S7 [Leopoldinia pulchra] >AKF02035.1 ribosomal protein S7 [Manicaria saccifera] >AKF02120.1 ribosomal protein S7 [Oenocarpus bataua] >AKF02181.1 ribosomal protein S7 [Oenocarpus minor] >AKQ51204.1 ribosomal protein S7 [Borassus flabellifer] >AMW66276.1 ribosomal protein S7 [Licuala paludosa] >QEP50051.1 ribosomal protein S7 [Brahea dulcis] >QEP50221.1 ribosomal protein S7 [Brahea decumbens] >QEP50476.1 ribosomal protein S7 [Brahea moorei] >QEP50561.1 ribosomal protein S7 [Brahea calcarea] >QEP50642.1 ribosomal protein S7 [Brahea pimo] >QEP50725.1 ribosomal protein S7 [Brahea salvadorensis] >QRZ59243.1 ribosomal protein S7 [Trachycarpus nanus] >QRZ59329.1 ribosomal protein S7 [Caryota urens] >QRZ59954.1 ribosomal protein S7 [Euterpe edulis] >QRZ60040.1 ribosomal protein S7 [Euterpe oleracea] >QWW89823.1 ribosomal protein S7 [Arenga micrantha])

HSP 1 Score: 171.0 bits (432), Expect = 6.5e-39
Identity = 99/143 (69.23%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRIMKHGKKSLAYQIIYRAVKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAIHGV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIHGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 167.9 bits (424), Expect = 5.2e-42
Identity = 98/143 (68.53%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

[Close]

BLAST of PI0022609 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 167.9 bits (424), Expect = 5.2e-42
Identity = 98/143 (68.53%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 6   TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSV 65
           +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSV
Sbjct: 2   SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSV 61

Query: 66  LRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLS 113
           LRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLS
Sbjct: 62  LRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS 121

The following BLAST results are available for this feature:

BLAST of PI0022609 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4QJG0	7.2e-41	68.53	30S ribosomal protein S7, chloroplastic OS=Aethionema cordifolium OX=434059 GN=r...	[more]
A4QJP4	7.2e-41	68.53	30S ribosomal protein S7, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=r...	[more]
A4QK64	7.2e-41	68.53	30S ribosomal protein S7, chloroplastic OS=Arabis hirsuta OX=78191 GN=rps7-A PE=...	[more]
P61841	7.2e-41	68.53	30S ribosomal protein S7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps7-...	[more]
A4QKF1	7.2e-41	68.53	30S ribosomal protein S7, chloroplastic OS=Barbarea verna OX=50458 GN=rps7-A PE=...	[more]

BLAST of PI0022609 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A445AH05	8.9e-42	80.83	Ribosomal_S7 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B02g05...	[more]
A0A1Y3BXG4	2.6e-41	80.00	Putative ribosomal protein S7 domain protein OS=Helianthus annuus OX=4232 GN=Han...	[more]
A0A445EEJ8	1.1e-39	77.50	Ribosomal_S7 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g00...	[more]
A0A143FVU5	3.2e-39	69.23	Ribosomal protein S7 OS=Pigafetta elata OX=93304 GN=rps7 PE=3 SV=1	[more]
A0A143FX40	3.2e-39	69.23	Ribosomal protein S7 OS=Brahea brandegeei OX=674193 GN=rps7 PE=3 SV=1	[more]

BLAST of PI0022609 vs. NCBI nr


Match Name	E-value	Identity	Description
RYR25695.1	1.8e-41	80.83	hypothetical protein Ahy_B02g059661 [Arachis hypogaea]	[more]
OTF84493.1	5.3e-41	80.00	putative ribosomal protein S7 domain protein [Helianthus annuus]	[more]
RYR73952.1	2.2e-39	77.50	hypothetical protein Ahy_A02g008535 [Arachis hypogaea]	[more]
AAN31973.1	6.5e-39	69.23	ribosomal protein S7 [Narthecium ossifragum]	[more]
YP_003540977.1	6.5e-39	69.23	30S ribosomal protein S7 [Phoenix dactylifera] >YP_003540993.1 30S ribosomal pro...	[more]

BLAST of PI0022609 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01240.1	5.2e-42	68.53	ribosomal protein S7	[more]
ATCG00900.1	5.2e-42	68.53	Ribosomal protein S7p/S5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 30..112 e-value: 1.1E-16 score: 60.9
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 12..113 e-value: 1.0E-21 score: 79.5
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 10..112
IPR000235	Ribosomal protein S5/S7	PANTHER	PTHR11205	RIBOSOMAL PROTEIN S7	coord: 6..30 coord: 31..113
None	No IPR available	PANTHER	PTHR11205:SF39	30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC	coord: 6..30 coord: 31..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0022609.1	PI0022609.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0009536	plastid
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome