PI0022453 (gene) Melon (PI 482460) v1

Overview
NamePI0022453
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 23061964 .. 23062225 (-)
RNA-Seq ExpressionPI0022453
SyntenyPI0022453
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAATGTGGTTTTAAGAGCCAGTGGTGGTGATGGCAAACTTCTGGAAAAGGATTCTTTTGAAGAGGAGATGAAGGGTGACCCAGTTATCATTCTTCCATTATCTGTTGGTGGATATATACTTCTGTTAGCGTTCCTTATATTAGTGGCGTATATGATGAACCAGCCATTTCAGTGGAAGCCATTTTATTTATTTTTCGAGCTGGTTTTATGAGTCTCGTCTTCCCTTTAACATCTTTTGTACTTCTGTTAGAGAGTAA

mRNA sequence

ATGATCAATGTGGTTTTAAGAGCCAGTGGTGGTGATGGCAAACTTCTGGAAAAGGATTCTTTTGAAGAGGAGATGAAGGGTGACCCAGTTATCATTCTTCCATTATCTGTTGGTGGATATATACTTCTGTTAGCGTTCCTTATATTAGTGGCCCATTTTATTTATTTTTCGAGCTGGTTTTATGAGTCTCGTCTTCCCTTTAACATCTTTTGTACTTCTGTTAGAGAGTAA

Coding sequence (CDS)

ATGATCAATGTGGTTTTAAGAGCCAGTGGTGGTGATGGCAAACTTCTGGAAAAGGATTCTTTTGAAGAGGAGATGAAGGGTGACCCAGTTATCATTCTTCCATTATCTGTTGGTGGATATATACTTCTGTTAGCGTTCCTTATATTAGTGGCCCATTTTATTTATTTTTCGAGCTGGTTTTATGAGTCTCGTCTTCCCTTTAACATCTTTTGTACTTCTGTTAGAGAGTAA

Protein sequence

MINVVLRASGGDGKLLEKDSFEEEMKGDPVIILPLSVGGYILLLAFLILVAHFIYFSSWFYESRLPFNIFCTSVRE
Homology
[Close]
BLAST of PI0022453 vs. ExPASy TrEMBL
Match: A0A0A0L3V4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644690 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.5e-23
Identity = 65/88 (73.86%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1  MINVVLRASGGDGKLLEKDSFEEEMKGDPVIILPLSVGGYILLLAFL------------I 60
          MINVV RASGGDGKLLEKDSFEEEMKGDPVIILPLSV GYILLL FL             
Sbjct: 1  MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIW 60

Query: 61 LVAHFIYFSSWFYESRLPFNIFCTSVRE 77
          L    IYFSSWF + RLPFNIFCTSVRE
Sbjct: 61 LDGSLIYFSSWFCKLRLPFNIFCTSVRE 88

[Close]
BLAST of PI0022453 vs. NCBI nr
Match: KGN55292.1 (hypothetical protein Csa_012509 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 65/88 (73.86%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1  MINVVLRASGGDGKLLEKDSFEEEMKGDPVIILPLSVGGYILLLAFL------------I 60
          MINVV RASGGDGKLLEKDSFEEEMKGDPVIILPLSV GYILLL FL             
Sbjct: 1  MINVVKRASGGDGKLLEKDSFEEEMKGDPVIILPLSVSGYILLLVFLRGVIGVYDEPAIW 60

Query: 61 LVAHFIYFSSWFYESRLPFNIFCTSVRE 77
          L    IYFSSWF + RLPFNIFCTSVRE
Sbjct: 61 LDGSLIYFSSWFCKLRLPFNIFCTSVRE 88

The following BLAST results are available for this feature:
BLAST of PI0022453 vs.
Match NameE-valueIdentityDescription
BLAST of PI0022453 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3V45.5e-2373.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644690 PE=4 SV=1[more]
BLAST of PI0022453 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55292.11.1e-2273.86hypothetical protein Csa_012509 [Cucumis sativus][more]
BLAST of PI0022453 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0022453.1PI0022453.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane