PI0022260 (gene) Melon (PI 482460) v1

Overview
NamePI0022260
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 11877876 .. 11878751 (-)
RNA-Seq ExpressionPI0022260
SyntenyPI0022260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAACACGATTTCCTTGGAGGAAATTCCATCTTGGAGAAATTCAAATCAACGTAGGTGAAATAATATGCGAACAAATTCACGAGTAGATTTGCAGACCACGATCAGGCAAGCCTATCCCCGCATTGATTGAGAAGCTTTACCAGGAGGCAATTCCAGTTTTCGACCACTATCCCAAAATCAAAGTTACGGAAGACCTCTGCACCATGTCTTGTTTGCGACAAATGATTAACCTCTATGCAAACAAAGAAGCAAAGACGCGAAGTAAATCTTCCAACCCAAACACAACTGTCCAAGACATGGAGGAAGATGAAGATGAGCCCCAATCATCGCTAAAGATAAAGAGCAGAGACGAGGCTTCTAGGTCTAAAACGCGAGGAAAAAAGCCCAAAACCAATGATTCTATGGACCCTCTGCCTCTAGCGATCTTGCATCCAATAGTGACCCTTTCTCCTTCTTCAACCAGCTCACCTATCCAACTCTCTTCTGAAAAGTCCAAAACGCCTCCTCCTCCCAAAGAATCCAAAGCACCTTCTCCTTTAAAATTCAAAACGCCTCCACAACAACTTCCATCACCATCTCCACTATCTCCATTTCCCGAAATGTCCAAGTTTCAACTTCCCAAAATATCCAAATCTCCCAAAAAATTCAAATCACCAAGCCCTCCCATCATAATCCCAACCTCCCCTTCTCCGCGGCAAGAAGACAATTCTCAGACTCTTGACGTCTCATTACCTTCACCTTCTCCCATTTTCCCACCTGCTCTTAACGACCCAACACCTGGACAAAGAGAGCTTGAAGAAGACTTCTTTCACAACCCTCTGACTGACTTCCCCACTAATCCTGCCACAAGCCCAAAAATAGTCATATTCTAA

mRNA sequence

ATGACAACACGATTTCCTTGGAGGAAATTCCATCTTGGAGAAATTCAAATCAACATTTGCAGACCACGATCAGGCAAGCCTATCCCCGCATTGATTGAGAAGCTTTACCAGGAGGCAATTCCAGTTTTCGACCACTATCCCAAAATCAAAGTTACGGAAGACCTCTGCACCATGTCTTGTTTGCGACAAATGATTAACCTCTATGCAAACAAAGAAGCAAAGACGCGAAGTAAATCTTCCAACCCAAACACAACTGTCCAAGACATGGAGGAAGATGAAGATGAGCCCCAATCATCGCTAAAGATAAAGAGCAGAGACGAGGCTTCTAGGTCTAAAACGCGAGGAAAAAAGCCCAAAACCAATGATTCTATGGACCCTCTGCCTCTAGCGATCTTGCATCCAATAGTGACCCTTTCTCCTTCTTCAACCAGCTCACCTATCCAACTCTCTTCTGAAAAGTCCAAAACGCCTCCTCCTCCCAAAGAATCCAAAGCACCTTCTCCTTTAAAATTCAAAACGCCTCCACAACAACTTCCATCACCATCTCCACTATCTCCATTTCCCGAAATGTCCAAGTTTCAACTTCCCAAAATATCCAAATCTCCCAAAAAATTCAAATCACCAAGCCCTCCCATCATAATCCCAACCTCCCCTTCTCCGCGGCAAGAAGACAATTCTCAGACTCTTGACGTCTCATTACCTTCACCTTCTCCCATTTTCCCACCTGCTCTTAACGACCCAACACCTGGACAAAGAGAGCTTGAAGAAGACTTCTTTCACAACCCTCTGACTGACTTCCCCACTAATCCTGCCACAAGCCCAAAAATAGTCATATTCTAA

Coding sequence (CDS)

ATGACAACACGATTTCCTTGGAGGAAATTCCATCTTGGAGAAATTCAAATCAACATTTGCAGACCACGATCAGGCAAGCCTATCCCCGCATTGATTGAGAAGCTTTACCAGGAGGCAATTCCAGTTTTCGACCACTATCCCAAAATCAAAGTTACGGAAGACCTCTGCACCATGTCTTGTTTGCGACAAATGATTAACCTCTATGCAAACAAAGAAGCAAAGACGCGAAGTAAATCTTCCAACCCAAACACAACTGTCCAAGACATGGAGGAAGATGAAGATGAGCCCCAATCATCGCTAAAGATAAAGAGCAGAGACGAGGCTTCTAGGTCTAAAACGCGAGGAAAAAAGCCCAAAACCAATGATTCTATGGACCCTCTGCCTCTAGCGATCTTGCATCCAATAGTGACCCTTTCTCCTTCTTCAACCAGCTCACCTATCCAACTCTCTTCTGAAAAGTCCAAAACGCCTCCTCCTCCCAAAGAATCCAAAGCACCTTCTCCTTTAAAATTCAAAACGCCTCCACAACAACTTCCATCACCATCTCCACTATCTCCATTTCCCGAAATGTCCAAGTTTCAACTTCCCAAAATATCCAAATCTCCCAAAAAATTCAAATCACCAAGCCCTCCCATCATAATCCCAACCTCCCCTTCTCCGCGGCAAGAAGACAATTCTCAGACTCTTGACGTCTCATTACCTTCACCTTCTCCCATTTTCCCACCTGCTCTTAACGACCCAACACCTGGACAAAGAGAGCTTGAAGAAGACTTCTTTCACAACCCTCTGACTGACTTCCCCACTAATCCTGCCACAAGCCCAAAAATAGTCATATTCTAA

Protein sequence

MTTRFPWRKFHLGEIQINICRPRSGKPIPALIEKLYQEAIPVFDHYPKIKVTEDLCTMSCLRQMINLYANKEAKTRSKSSNPNTTVQDMEEDEDEPQSSLKIKSRDEASRSKTRGKKPKTNDSMDPLPLAILHPIVTLSPSSTSSPIQLSSEKSKTPPPPKESKAPSPLKFKTPPQQLPSPSPLSPFPEMSKFQLPKISKSPKKFKSPSPPIIIPTSPSPRQEDNSQTLDVSLPSPSPIFPPALNDPTPGQRELEEDFFHNPLTDFPTNPATSPKIVIF
Homology
BLAST of PI0022260 vs. ExPASy TrEMBL
Match: A0A5A7VP61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00820 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-05
Identity = 82/244 (33.61%), Postives = 118/244 (48.36%), Query Frame = 0

Query: 35  LYQEAIPVF-DHYPKIKVTEDLCTMSCLRQMINLYANKEAK--TRSKSSNPNTTVQDM-- 94
           LY +A P F + +P+  V +D+CT+  L ++INL+ NKE     ++K     T V ++  
Sbjct: 2   LYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDEVET 61

Query: 95  --EEDEDEPQSSLKIKSRDEASRSKTRGK-KPKTNDSMDPLPLAILHPIVTLSPSSTSSP 154
             EE+ ++ Q  LK K + E   S  + K + K  DS DPL LA+     T+ P   +  
Sbjct: 62  KEEEEREDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLAL-----TIVPQDQTPK 121

Query: 155 IQLSSEKSKTPPPPKESKAPSPLKFKTPPQQLPSPSPLSPFPEMSKFQLPKISKSPKKFK 214
             +S  KSKT    K   +PS     TPP  LPS              + K + S  K K
Sbjct: 122 ETISLPKSKT-TMAKIISSPS----GTPPPPLPS--------------IQKQTPSTSKTK 181

Query: 215 SPSPPIIIPTSP-SPRQEDNSQTLDVSLPSPSPIFPPALNDPTPGQ-----RELEEDFFH 265
           SPSP   I T     RQ+D  QTL V+L  P+ +  P+L+DP   Q     +EL ED   
Sbjct: 182 SPSPSHKIQTHTFLMRQKDTFQTLVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSIC 221

BLAST of PI0022260 vs. ExPASy TrEMBL
Match: A0A5A7VJW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001290 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-05
Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = 0

Query: 24  SGKPIPALIEKLYQEAIPVFDHYPKIKVTEDLCTMSCLRQMINLYANKEAK-----TRSK 83
           + KP   LI++LY +  P   + P     +++C ++ L  MI L+ NK         +SK
Sbjct: 21  AAKPFSHLIKQLYLKECPTLKNIPTTMAKDEICIITSLNCMIRLHKNKSEDKSLNINKSK 80

Query: 84  SSNPNTTVQ-DMEEDEDEPQSSLKIKSRDEASRSKTRGKKPKTNDSMDPLPLAILHPIVT 143
             + +  ++ D EE++D      K K +D AS+ K R  KP  N+S DP+ L I+  +VT
Sbjct: 81  KFDKDNEMEIDKEEEQDRTPLVRKRKGKDNASKLKKREMKPIANESTDPISLGIVTSLVT 140

Query: 144 LSPSSTSSPI 148
            +  +T SP+
Sbjct: 141 QTTQTTISPL 150

BLAST of PI0022260 vs. NCBI nr
Match: KAA0067069.1 (hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK26305.1 hypothetical protein E5676_scaffold14G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-05
Identity = 82/244 (33.61%), Postives = 118/244 (48.36%), Query Frame = 0

Query: 35  LYQEAIPVF-DHYPKIKVTEDLCTMSCLRQMINLYANKEAK--TRSKSSNPNTTVQDM-- 94
           LY +A P F + +P+  V +D+CT+  L ++INL+ NKE     ++K     T V ++  
Sbjct: 2   LYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDEVET 61

Query: 95  --EEDEDEPQSSLKIKSRDEASRSKTRGK-KPKTNDSMDPLPLAILHPIVTLSPSSTSSP 154
             EE+ ++ Q  LK K + E   S  + K + K  DS DPL LA+     T+ P   +  
Sbjct: 62  KEEEEREDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLAL-----TIVPQDQTPK 121

Query: 155 IQLSSEKSKTPPPPKESKAPSPLKFKTPPQQLPSPSPLSPFPEMSKFQLPKISKSPKKFK 214
             +S  KSKT    K   +PS     TPP  LPS              + K + S  K K
Sbjct: 122 ETISLPKSKT-TMAKIISSPS----GTPPPPLPS--------------IQKQTPSTSKTK 181

Query: 215 SPSPPIIIPTSP-SPRQEDNSQTLDVSLPSPSPIFPPALNDPTPGQ-----RELEEDFFH 265
           SPSP   I T     RQ+D  QTL V+L  P+ +  P+L+DP   Q     +EL ED   
Sbjct: 182 SPSPSHKIQTHTFLMRQKDTFQTLVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSIC 221

BLAST of PI0022260 vs. NCBI nr
Match: KAA0067460.1 (hypothetical protein E6C27_scaffold40G001290 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-05
Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = 0

Query: 24  SGKPIPALIEKLYQEAIPVFDHYPKIKVTEDLCTMSCLRQMINLYANKEAK-----TRSK 83
           + KP   LI++LY +  P   + P     +++C ++ L  MI L+ NK         +SK
Sbjct: 21  AAKPFSHLIKQLYLKECPTLKNIPTTMAKDEICIITSLNCMIRLHKNKSEDKSLNINKSK 80

Query: 84  SSNPNTTVQ-DMEEDEDEPQSSLKIKSRDEASRSKTRGKKPKTNDSMDPLPLAILHPIVT 143
             + +  ++ D EE++D      K K +D AS+ K R  KP  N+S DP+ L I+  +VT
Sbjct: 81  KFDKDNEMEIDKEEEQDRTPLVRKRKGKDNASKLKKREMKPIANESTDPISLGIVTSLVT 140

Query: 144 LSPSSTSSPI 148
            +  +T SP+
Sbjct: 141 QTTQTTISPL 150

BLAST of PI0022260 vs. NCBI nr
Match: KAA0058409.1 (hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK04704.1 hypothetical protein E5676_scaffold76994G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-04
Identity = 43/125 (34.40%), Postives = 66/125 (52.80%), Query Frame = 0

Query: 15  IQINICRPRSGKPIPALIEKLYQEAIPVFDHYPKIKVTEDLCTMSCLRQMINLYANKE-- 74
           IQ  +  P   +P+P LIE+++ +A     +  K  V +++CT++ +  MINL  NK   
Sbjct: 36  IQAWVRHPHDARPLPNLIEQIFLKACFALKNLLKTMVKDEICTITSVSHMINLNKNKAED 95

Query: 75  --AKTR---SKSSNPNTTVQDMEEDEDEPQSSL--KIKSRDEASRSKTRGKKPKTNDSMD 131
              KT+       +    + + EE EDE  S L  K+K  ++A  S+ R +KPK  DS D
Sbjct: 96  KCLKTKEIEKVKEDDKMEIDEEEEREDETLSPLIRKMKGENKAFGSRKRKRKPKAKDSRD 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VP611.0e-0533.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VJW31.7e-0531.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0067069.12.1e-0533.61hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK2630... [more]
KAA0067460.13.6e-0531.54hypothetical protein E6C27_scaffold40G001290 [Cucumis melo var. makuwa][more]
KAA0058409.11.0e-0434.40hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK047... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0022260.1PI0022260.1mRNA