PI0022049 (gene) Melon (PI 482460) v1

Overview
NamePI0022049
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionCotton fiber protein
Locationchr06: 30197380 .. 30197730 (+)
RNA-Seq ExpressionPI0022049
SyntenyPI0022049
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTTCGCCTCGAGAAGACATTAAACAAACTCAAAGCATTTTTCCGTCTCTGCCGTCTTCTCCGACGACGCTCCGTCCATCGGACACCAAATCGAAATGTCTTGAAAGACGATCAAACCACGAGAAACCTTGAATGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCAAGCGGAGATCTTCATCGAGAATTTTCGTCGTCAATTGAGTTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGTATGGAGTTAATAATAGCTTTGAAACAGAGTGTGAAGAAATATTGCCGCCGCCACCACCATCGCCACTGCCAATTGAATGA

mRNA sequence

ATGGCGCTTCGCCTCGAGAAGACATTAAACAAACTCAAAGCATTTTTCCGTCTCTGCCGTCTTCTCCGACGACGCTCCGTCCATCGGACACCAAATCGAAATGTCTTGAAAGACGATCAAACCACGAGAAACCTTGAATGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCAAGCGGAGATCTTCATCGAGAATTTTCGTCGTCAATTGAGTTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGTATGGAGTTAATAATAGCTTTGAAACAGAGTGTGAAGAAATATTGCCGCCGCCACCACCATCGCCACTGCCAATTGAATGA

Coding sequence (CDS)

ATGGCGCTTCGCCTCGAGAAGACATTAAACAAACTCAAAGCATTTTTCCGTCTCTGCCGTCTTCTCCGACGACGCTCCGTCCATCGGACACCAAATCGAAATGTCTTGAAAGACGATCAAACCACGAGAAACCTTGAATGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCAAGCGGAGATCTTCATCGAGAATTTTCGTCGTCAATTGAGTTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGTATGGAGTTAATAATAGCTTTGAAACAGAGTGTGAAGAAATATTGCCGCCGCCACCACCATCGCCACTGCCAATTGAATGA

Protein sequence

MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEILPPPPPSPLPIE
Homology
BLAST of PI0022049 vs. ExPASy TrEMBL
Match: A0A0A0L6A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.0e-41
Identity = 97/113 (85.84%), Postives = 103/113 (91.15%), Query Frame = 0

Query: 1   MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFE 60
           MALRLE+TLNKLKAF RLC LLRRRS++RT  RNVL+DDQT RNLE DSSSRYESCEEFE
Sbjct: 1   MALRLEETLNKLKAFLRLCLLLRRRSIYRT--RNVLEDDQTARNLERDSSSRYESCEEFE 60

Query: 61  DDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFETECEEILPPPPPSP 113
           DDVDH+AEIFIENFRRQL LERQISLQLRLYGV NNSFET+ EEILPPPPP P
Sbjct: 61  DDVDHRAEIFIENFRRQLRLERQISLQLRLYGVNNNSFETDYEEILPPPPPPP 111

BLAST of PI0022049 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.2e-14
Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = 0

Query: 1   MALRLEKTLNKLKAFFRLCRLLRRRSVH--------RTPNRNVLKDDQT-------TRNL 60
           MA RL+K L KL A  RLC + RRRS          R     ++ +DQ+        R L
Sbjct: 8   MASRLKKALIKLTAVVRLCLVPRRRSQRLGSFDSDDRKVGIRIVLEDQSRIAENSFARKL 67

Query: 61  ECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEIL 108
           E  SSSRY     +E+DVD +AEIFIENFRRQL LERQISLQLR Y V NS+ETE E+I 
Sbjct: 68  ERASSSRYGG---YEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRV-NSYETEYEQIS 125

BLAST of PI0022049 vs. ExPASy TrEMBL
Match: A0A0A0L4Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.6e-13
Identity = 64/122 (52.46%), Postives = 73/122 (59.84%), Query Frame = 0

Query: 1   MALRLEKTLNKLKAFFRLCRLLRRRS----------VHRTPNRNVLKDDQT------TRN 60
           MA RL+K L KLKA  RLC L R+RS            +   R VL+D          R 
Sbjct: 8   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 67

Query: 61  LECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEI 107
           LE  SSSRY     +E+DVD +AEIFIENFRRQL LERQISLQLR Y V NS+ETE E+ 
Sbjct: 68  LERASSSRYGG---YEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRV-NSYETEYEQR 125

BLAST of PI0022049 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08
Identity = 56/125 (44.80%), Postives = 73/125 (58.40%), Query Frame = 0

Query: 4   RLEKTLNKLKAFFRL---CRLLRRRSVHRTPN----------RNVLKDDQ-----TTRNL 63
           RL+K + K+ A  RL     L RRR   R  +          R+ L+D++     + R L
Sbjct: 11  RLKKAVRKITALLRLNLSLCLARRRPSGRLRSFSFSDRTVGLRSFLEDEEIGENCSMRRL 70

Query: 64  ECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEIL 111
           E  SS RY +    EDDVD +++IFI+NF R+L LERQISLQLR Y +N+S  TE EE  
Sbjct: 71  ERASSLRYGNA---EDDVDKRSQIFIDNFLRRLRLERQISLQLRYYRINSS-GTEDEERS 130

BLAST of PI0022049 vs. ExPASy TrEMBL
Match: A0A7I8JS04 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_16018613 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 9.4e-06
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0

Query: 61  DDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEILPPPPPSPLP 115
           DDVD + E FI  FRR L +ERQISL+LR Y ++NSFE +   + PPPPP PLP
Sbjct: 107 DDVDDRTENFIAIFRRHLEVERQISLELR-YCMSNSFEGDLTGMTPPPPPPPLP 159

BLAST of PI0022049 vs. NCBI nr
Match: KAE8650012.1 (hypothetical protein Csa_009473 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 8.3e-41
Identity = 97/113 (85.84%), Postives = 103/113 (91.15%), Query Frame = 0

Query: 1   MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFE 60
           MALRLE+TLNKLKAF RLC LLRRRS++RT  RNVL+DDQT RNLE DSSSRYESCEEFE
Sbjct: 130 MALRLEETLNKLKAFLRLCLLLRRRSIYRT--RNVLEDDQTARNLERDSSSRYESCEEFE 189

Query: 61  DDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFETECEEILPPPPPSP 113
           DDVDH+AEIFIENFRRQL LERQISLQLRLYGV NNSFET+ EEILPPPPP P
Sbjct: 190 DDVDHRAEIFIENFRRQLRLERQISLQLRLYGVNNNSFETDYEEILPPPPPPP 240

BLAST of PI0022049 vs. NCBI nr
Match: XP_031739290.1 (uncharacterized protein LOC116402928 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 8.3e-41
Identity = 97/113 (85.84%), Postives = 103/113 (91.15%), Query Frame = 0

Query: 1   MALRLEKTLNKLKAFFRLCRLLRRRSVHRTPNRNVLKDDQTTRNLECDSSSRYESCEEFE 60
           MALRLE+TLNKLKAF RLC LLRRRS++RT  RNVL+DDQT RNLE DSSSRYESCEEFE
Sbjct: 5   MALRLEETLNKLKAFLRLCLLLRRRSIYRT--RNVLEDDQTARNLERDSSSRYESCEEFE 64

Query: 61  DDVDHQAEIFIENFRRQLSLERQISLQLRLYGV-NNSFETECEEILPPPPPSP 113
           DDVDH+AEIFIENFRRQL LERQISLQLRLYGV NNSFET+ EEILPPPPP P
Sbjct: 65  DDVDHRAEIFIENFRRQLRLERQISLQLRLYGVNNNSFETDYEEILPPPPPPP 115

BLAST of PI0022049 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 8.7e-14
Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = 0

Query: 1   MALRLEKTLNKLKAFFRLCRLLRRRSVH--------RTPNRNVLKDDQT-------TRNL 60
           MA RL+K L KL A  RLC + RRRS          R     ++ +DQ+        R L
Sbjct: 8   MASRLKKALIKLTAVVRLCLVPRRRSQRLGSFDSDDRKVGIRIVLEDQSRIAENSFARKL 67

Query: 61  ECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEIL 108
           E  SSSRY     +E+DVD +AEIFIENFRRQL LERQISLQLR Y V NS+ETE E+I 
Sbjct: 68  ERASSSRYGG---YEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRV-NSYETEYEQIS 125

BLAST of PI0022049 vs. NCBI nr
Match: XP_011652707.1 (uncharacterized protein LOC105435054 [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 7.3e-13
Identity = 64/122 (52.46%), Postives = 73/122 (59.84%), Query Frame = 0

Query: 1   MALRLEKTLNKLKAFFRLCRLLRRRS----------VHRTPNRNVLKDDQT------TRN 60
           MA RL+K L KLKA  RLC L R+RS            +   R VL+D          R 
Sbjct: 1   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 60

Query: 61  LECDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEI 107
           LE  SSSRY     +E+DVD +AEIFIENFRRQL LERQISLQLR Y V NS+ETE E+ 
Sbjct: 61  LERASSSRYGG---YEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRV-NSYETEYEQR 118

BLAST of PI0022049 vs. NCBI nr
Match: KAG7015798.1 (hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-11
Identity = 60/121 (49.59%), Postives = 75/121 (61.98%), Query Frame = 0

Query: 1   MALRLEKTLNKLKAFFRLCRLLR---RR-----SVHRTPN-RNVLKDDQ-----TTRNLE 60
           + LR++K L KL AF RLC + R   RR     S  RT   R++L D+      + R LE
Sbjct: 8   VVLRMKKALTKLTAFVRLCHVFRPPSRRMRSFDSDGRTAGLRSILGDESIVEKCSVRKLE 67

Query: 61  CDSSSRYESCEEFEDDVDHQAEIFIENFRRQLSLERQISLQLRLYGVNNSFETECEEILP 108
              SSR  SC   EDDVD +A+IFI+NFRRQL LERQISL+LR YG+N+S E + E   P
Sbjct: 68  RGESSRNGSC---EDDVDQRAQIFIDNFRRQLMLERQISLKLRYYGINSS-EIDYEARSP 124

BLAST of PI0022049 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 6.0e-05
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 0

Query: 60  EDDVDHQAEIFIENFRRQLSLERQISLQLR-LYGVNNSF 98
           ++D+D++AE+FI NF RQL +ERQISL+L+   G N SF
Sbjct: 87  DEDIDNKAEMFIANFYRQLKIERQISLELKYCQGNNQSF 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L6A34.0e-4185.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1[more]
A0A5D3CHZ54.2e-1452.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L4Z83.6e-1352.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1[more]
A0A6J1CW641.2e-0844.80uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A7I8JS049.4e-0659.26Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_16018613 PE=4 SV... [more]
Match NameE-valueIdentityDescription
KAE8650012.18.3e-4185.84hypothetical protein Csa_009473 [Cucumis sativus][more]
XP_031739290.18.3e-4185.84uncharacterized protein LOC116402928 [Cucumis sativus][more]
KAA0052985.18.7e-1452.46hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK1144... [more]
XP_011652707.17.3e-1352.46uncharacterized protein LOC105435054 [Cucumis sativus][more]
KAG7015798.12.4e-1149.59hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT5G57510.16.0e-0556.41unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 60..87
e-value: 2.4E-8
score: 33.4
NoneNo IPR availablePANTHERPTHR33098:SF64OS08G0448100 PROTEINcoord: 27..100
NoneNo IPR availablePANTHERPTHR33098COTTON FIBER (DUF761)coord: 27..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0022049.1PI0022049.1mRNA