PI0021968 (gene) Melon (PI 482460) v1

Overview


Name	PI0021968
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DExH-box ATP-dependent RNA helicase DExH6 isoform X1
Location	chr07: 6292966 .. 6304648 (+)
RNA-Seq Expression	PI0021968
Synteny	PI0021968

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGGGGTGAAGAGAGAAGTTACACGGTTGATGAAAGGCGATGGAAAAGCAAGCGCCATTAATACATTAGGGCACTACTCAATGTTTCAAATGTTGTCTCTGTCTCCTGTCTCTTCTTCTACTTTTTAGTTTTCTTATAACTGAAGAAAAAAGAAGAAAAAGCTTCTGAAACCAGTGGGAGGAGGAAGGAAGAAGCTTCAGCTAGAAAAGTAATGGCGAAGAAGAAGCAGAAGAAGGGGGAGCAAAAGCCTAAATCCAAACCAATTTCAAACGTGGGTTGTGCAATTACACAAGCACTCGAACGGTTTTGCCTGACCAATGACGAAGGTAAATTGGAAATCATGACCCAGATTGAGAAATGAGAAGAAGATGGAGTTCTTCAGTTGTGTTCATGTTATATTCCAATGGAATGATTTAAATAATTTGTGGGTTTTAATGGGTCTTGTGATTTTTGGTTGTGGGTGATTGCTTCTGCTTTCATTTCTTCATTTTTTTTTCATTTATCAAATATTACGTGGAAGCTTCAAAGAAGGGCCTGTTTGTTTGGCTATGTTGGTTGCTCCTGAGTAGTTGGTCAAGGCATTGAAAATTGAAATTGGTTTTGAGTATGAATTTCTTAAGATTTCTGGTATGGTGGAAGGCTACTCAATGGAGAAAAATGATCAGAACTCTGAAATTTGAGTTTATTGCGATTGACTCGTCCTAGCTATCATTTAGATTCTTCTATATTAACGGGCACGGTTCCTTTTTCTCTTTGAAAAACTTCTGCCGACATCTCACAATGGCAAAACTAATTGCAGAAAAACAATCTAGCCTTTCTAAGTACGAACTAGAGATTTTCTGCCTTTTCAACTGTCGAGTTGCAACTTTTTGATAAGAAAGGAGGTTTCAGGGTCGTTAAAAAAACACTGGAGGAATGCCCAAACTAGTGTTTTTGTGAAGTCTATGTTTTCACCTCTTCAAATGGATTAGTTTAGTTAATTTATCTTTTTCATTTTCTTCAGTATTTACGAGATTTAGCATGTCTGGTGTGGATATGGATTATAAATCAAACTTTACTGGCCTCTTTATGCTGGCCCGGCAATGAACTTGGTGTTAGATGTTATGGGTAACATGACTTGGATGATTGTTGGCGATTTGTTTCTTAAGTGCAGCAGTAGTCATTCTAATCTTTCTCTCTAGTCTATAGTCTATCTTCCTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTAATGAGAAACATGGATCATAATTTTCATTGATGGGATGAAATTACAAAAAGGCAACAAAAGTCATGAGAGATTGCATAATGCTATTCCATTCTGAGATAAGAGAACTAAGATTATAATCACAAAAGAAAGATGCGAGTTTACATTAAGAAAGAGTTGTAAACAAAAGGTGATTAAAAAGTTGTATGAAGTCCATTTCCTTGTCGTCAAAGATGTGAGGGTTTTGCTCAATCCACAAGGACCATAGGAAGGCTTTGATGATGAAAGTCCATAAAATCTCCTCGTCCTTCTTGAATGGACGATCATTAAGCAGCATAGTCAGAAGAAGAAGGGATCGTTTAGGAGGACTAAGTGATAATTGAATGTATTCTTGATTTTGTTCCAAAAAGCCTGCACAAAATCACAATGAACTGGTATGTAAGAGATTCTTCACTTTTACGGCAAAGAACACATCAGCTAGGGGGAGATATACTATCCATGCAGCTTTTTTTAATCAATCACATTTCTTAAAACTCTCAACTCTTTGTTGTTCCTCATGCAATATTTTTCTCCCATGTACAGATGTACTAATATTGGAGTCTGTCTTTATCTGTTGTTTAATTAGCCACTATATGGATGTTTCATGCAGTTTTCACTTTCGAAGCTGATCTTTCGAAGCGTGAACGTGCTCTCGTGCATGAAGTGTGCAGGAAAATGGGTATGACATCAAAGAGTTCTGGGTAAGTTTCAATTAGCAATGTCTCCCTTGGGTTTAGATGGCATCTAGTCATATATAGCATAGCTATTTAAAGTAACTTCATATTCCTGGAAGGAAAATCTTCCCCATGTTTGGCCCCTAGAGTATTCTGCTTTGGGTTTCTCAGTTTCTCCGCTCTTTGTAGGCATGGAGACCAACGACGTGTGTCTGTATATAAATCCAAACTGCAAATGGAGACGATGAAATTTTCTGAAAAAACCAAAACTGTTTTGGACGACTTGTTTAGTATGTATCCTCCCGATGATGGAGAGTTGGGCAAGGAGACAGTTGGGAACCACAATAAAAAGGCTGATAAGCAAAGGCGTAAGAAAGATGACATTTTCTGGAGGCCGTCAATGAACAAGGAAGAGCTAATGAAGAAATTGGGATCATATACTATGAAGAGTGTTGCTAATATGAAAAAGGTTTCTTTGAGTACATGAACAAAAGTGATGAAGTTTACTGGTTTTATGCTGTACCTTCATCTCTCTCTTTTAGTTTTTCTTACGTAGGAAATTTGCCTGAAGTTTAAAGGTTATCATCTTAATACCAAAGTAGCTGATAGCGAACTTTTGATACTTTTCTTTTTGTAGATCGCAGAAGAGAGATCTAAGCTTCCAATTGCATCATTTCGAGATGTCATTACTTCAACAGTTGAATCTCATCAGGTTGCTTTTAATATACAACCCTGTTCAAATTACTTATCATCTTTAGACTGCCAAAAAAACTCTATTGTTCTTGTGCATTTTTTTACATGGTTCTTTGGAGCTAGTGTTGGTTGGTCTCTGGTTTCCTTATCTTAACCGATGTATCAATTTCTATCCCAATAACTGCTTGATCATTGTTTTAAGCAGGTCGTTCTCATATCTGGTGAGACTGGGTGTGGAAAGACAACGCAGGTTACCCATTCTTTCTCTTTAATGATTGCTATTTATTTATTTATTTTTCTCCTTTGTTCATCATTGCTTGCTTGCCTAACACTCTGTTTTGGATGCAATGAATTATTTTCTAATAGATAGATTTATCCCCGTGTTTGGTCCCATATATGAGTTGCATTGTTTGTTGGCGTTCTATGTACTTTTTTACATCCCACCTTTTTAAACAAGAATTAGGAAGAAACAGATGTGAAATTTGAACAAGATATCCATCCCTTGCTCCACCAATGACATCCTCATGAATCACCTTAGGCCTTAGGGGTTTGGACCATTTCATGTTTCTAAACTCTGTTTATCTTCACAAAAAGAAGAAAATAATCACCCCTTGAGCTAGTATCCACTTGTTCTATAGGGAAATCTGGTCCTCCACAAATTAGCAGCTGACACAGAGATATATATATCCTACTGATTTTGTTTTGCATTTTGAATGTGGACCAAGGAAAATTATGACACTCATTACAATGCTGTTTGTCTTTTACGGAATTACCACCATAAAGCTTGATGATCTTTCATGTTTTGTATAGGTCCCTCAGTTTCTTTTGGATTATATGTGGGGTAAGGGAGAGACGTGTAAGATAGTTTGTACCCAACCTCGACGAATATCTGCTGTATCAGGTTAGCTCTATTTATTACCTTTTTGCTGTCTTTTTTTCTTTTGAAATTGTTTTTTCCTTGACTTCACTATTATTAGTCGTTTTACTTCCATTTCTTTGAATGTTGTCTTCTTCTGTTTTAGTTTCTGAGCGAATCTCCTATGAAAGAGGAGAAAATGTTGGAAGTGATATTGGATACAAGGTATTCTTCCTGCCGGTTGTTTACACCAAAAGATATCTAATTAGTTAGAATTTTATTATCCTTTGGAGTTTCAGTGAGGGGATCAGTTTTGGTCTATTTCTCGAAGTAACTGATGTTGGGAAGATGTTTATGATGAAAACATGATAGGACTTTATCAATTCAATCCCTTTGTTCTTGCTGCTTGTATGATCTGCCTACGTGTATGTATCCATTGTTTGGGGTTCAACTGGATTGGAATTGTGAAAAATTCTTATTTTATAGCTTATTTTGAGAATTTATACAACTGAAGTTATTTCTTATTAGCAAGGGGCACTTTTGGAATTCTCCACTTAAATATATGGAGATGTCTATAACATCGTGTTAATTTTGTTTTCATAAACAATACATCTGGTGACATTTTCTTTTTCTTTTTTTCTTTCATAATGGAAGATACGACTGGAAAGTAAAGGTGGTAGACACTCATCAATCGTACTCTGTACGAATGGCATTCTCTTAAGGGTGCTGATTTCAGAGGGGTTGGGCAAATTAACAATGGAAGCCTCCAGAAAGAGTAGGAAAAATGTTGTGTCGGACTTAACTCACATTATTGTGGTATGTATTCTATTTCTTGCTTGTGCGTTTTGTCCTTTTCTTTGCCACATCGTGCATGGTTTTGTTGCTCTAATTTGGTGCAGTTTAGTATACTTTTGAATTTTGCAGAGTGTTTTGTTCCCAATTTAAATTACCTACCAACTTTTCACCATAAGATTATTACCATTATTATTTGGATAACAAATAGAAGAGACTTAAAGAAGATAAAGAAGTGCAACTTAGCAAAACAGAGAACCTTCCCATAATTATCTAGGATTCCCACTCGACGGCAATTATTGCGGATCCCGTGGTTGATAAGTTCAGAATAACGTACCTAAATGGAAGATCTCCTTGCTTTCTAAAGGAAGGTGGCTCTCTTTGATTACTTTGGTCCTTAATGGGCTCCCTTTGTACTTCTTTTCCATCCTCAAAGCTCACACATTGAAAAACTTATTAAAGGTTTCTTCTTGAATTGCCGTCTAGGATTCCATTGTGTGAATTGGAAAATTGCCTCCTCCTATTACCGTAGTGGACTTGGAATTGGTTCTCTCAAACATAGAAATCTAGCCTCCTTACCAAGTGGTGATTTTCTGAGGATAAACGGCTTTTGAGACAAGTGGTAACTGGTAGATTATGGGGAAGGACCACTTGGGTGGAAAGGTTTTAATACCCAAGGGAAACTCAAATGATCGACCTTGGTTTGGATCACTGATACAACTCCTTTGTTTGACAGATTCACTAGTTTCAAAGTTGGTCATGGCCAGTTTATTAGTTCCTGATATGATGTGTGGGTTGGCTCCTTTCCTCTTTAAGATGAGTTTCCAGATATTTTTAATCTCTTTAAATTGGGGTGCTACGGTGGCTGATTGTTAGGATAATGATCTGGGAACTTGAAATCTAAGCGTTAGAGGAGACATTTGACAGAGATGGACAACTGGGTTGGTTTGACTACTAAATATGGATGTTGTCTTTGGCGTGTTCGAGCATGTCCTTCAGTCTTCAATTATTAAAAAAACAAGACATGCCGAATTGTGTGTCTGACTTGTGCCTGGCACTTGCTCGACTGTGTCATGTGTCGAACACCTAAACATCGACACTTCTTCAAAAATGAAGTATCTGTGGCTCCTATTTCATTAGGAACTCCCTGATCTCCCTATCTCTCGAATCTTGTCTCAAAATCAAATTTCATTCTTGATTATTGAAATTTCAACCATCTTTGATTAAAACATCTTTTTTATATTATAATCACCTATTGGTGTTGGATCTATCCTTTTATTTCAATCATTAACGAAATGTTTCTATTAACAAGGAAAAAAAACTCTACAACATATTATGCAAATCCTTAGACATAAATCTAGAAAGAATGCACCAATGCATAAACAAGATAAAGGAAGAGTGTCTTTGAACTTTTTCTAAAGAACTCTCTCACGTAAAACTTTGCCTTTCTAGGAATTTTAATTCCTGATGGTAGAGACTGTTTGTGGTAGAAAAGAGATAGACACCACAGAAAGAAGGATCTACAAGAAAAACTCCTTGAGCCTCAGGCAACCATTTCTGTTGATAGCGTAGTTGCTTCTGATCCCTTTCCTTCAAAAAAGCATTTTTCTTTCATGAAATGCCTAACCATTTGATGATTTGAGAAGGAAGGATAGATTTTTCCTGTTAAGGCCATCATTTCATCTTATTAAGATTGTAAAACGAAGAGGCTGCACAAAAGATAGGCCAAATCGAATTCAAGGGACCACCAAAGGATATATAAAAAAAATTTCACGGAAGTACTTGTAAAAAAAAATCATAAAGTGGCCCAATTGTTGGTAACAAATAAAAAAAGTGTTCAGTGAAAGCTAACTATTCTCCATGCCTCCTCAAGACACTTACATTCCCAAGAAAGGCTCTTTTATTCCTCAACTTTATGACCTTTCTTTCACCTTCAGGAGGATACAAAAGGACATTGTCCAAGATTGTCTTTGATGCTAGTTAATGTTCCAATATTACATGTTTCTCCATCTATGCGTTGTGAATACGTCTTTTTTGGCCTTTATATTATTCTTATTTTTCTGTTTGTAGGATGAAGTTCATGAAAGGGACCGTTACTCTGACTTCATTCTAACAATTTTGAGGTATACTAATGTTGATTCTCTCTCATGTGTGAGTTATTTATTACTTGTCTCTTTTTGAATTTTTTGACAAAAAAAAAAAACTTGTCAGTTATTCTGAAATAAACTTTTCGTAAGAAATTGAAAGAAGATGAGAAATGTTGTCCCACAATACTTGCTCTCTCCCTTGCTGATTTGTTATTCTGTTATGTCAAAAAAAAAAAAAAGAAAAAAAAATCTGTAGTTGTTATGTCACAGGAATTCGTTGATAAGAAACTCTATCTAGAAGCCAAGAGGAATTGAAAAAAAATGGTCTTTGGTCTTTCAATATTTGGATGGTATATGGTTAAGTTTTTCTTCTACCAAATTATCCATATTGACATATAAGTAGTTTTTTTCCACCGTCCACAACATTTGCTACTTTTGCAATTAGCTAGGAAGTACAGACATTTCTTTTAACAGTGTGCGTGACTGTCGAGTCAACCTGTGTTAGGCTTTTACTTGGTCATACATGTGCTAGACACTCTAAATTATGCATGTATGAGTATTTAGACTTCTATAAGCAAGGTACCAAAAAAAGATCTTCACTTTCTTGAGAATTTTAAGCTTCCTGACAGGGTTGGCCATTGGGAAGTTGTTTTTCGTGACCCCCTTAGTGAAGTTTAGGAACGTAGACTTGGTGCATCCATATCAATCCAAAGTTCGTGTTTCTTTCACAGTTTCACCTTTGTCCTCCACCTTGGGATTCCTTATTTTATTAAAAGTTCTGTGTATTTTTCTTCACTCCTTTTCTTACTTGTTTGCAGAGACTTGCTTCCATCGTATCCTCAGTTAAGGCTGGTTAGTTTTATTCTTCTTTGGTTTTACTTGAGCTTTTTTTCCCCTTTTACTATTCATACTGCTATTCAAATTATTCATACTTCTCTTGTAATTGTAGAAAATGAGACAATTTTGAAGATTTATGGTGGCTTGTCATTTGGTATGACTGAGATGCATACTTTTGTTTTATATCTTGACAGATACTCATGAGTGCTACAATTGATGCTGAACGGTTTTCAAAGTATTTTGGAGGCTGTCCAATCATCAACGTTCCTGGATTCACCTATCCTGTAAACCTTCCACTCTGATCTTGTAGTTTTGAATTGATATTTAATTTAGGGCCCTATTCTAACACTTAAATATTCAGGTAAAAAATTTCTATCTGGAGGATGTACTTTCTATAGTGAAATCTTCAGAAGAGAACCACCTTGATGACAGTATAGTGGGTGTTTCAGATGAGGAACCTGAGCTAACTGAAGAAGACAAGCTTGCTTTGGATGAATCGATTGACATGGCTTGGTTGAATGGCGAATTCGATCCCCTTCTAGAATTGGTTGCTTCTGGTGGATCCTCTCAAATTTTCAATTATCAGCATTCCGTGACTGGGCTAACACCTCTGATGGTTCTTGCTGGAAAGGGTAGAGTTTCCGATGTTTGCATGCTGCTATCTTTTGGTGCTATGTGTGAATTACAGGCCAAGGATGGCACAACTGCATTGGAATTGGCTGAACGAGGAGATCAGAAAGAAACTGCTGAAGCCATCAGAAAACATTTGGAAAATTCCATGTCCAACTCCAAGGAAGAACGTCGGTTAATTGGTGCATATCTTGCAAAAAATTCTAATTCTGTTGATGTTCGTCTTATAGAGCAGTTGTTAGGAAAAATATGTCTTGATTCAAAAGAAGGAGCTATTCTTGTTTTCCTTCCTGGGTGGGATGACATTAGCAAGACTCGAGAAAGATTATCAGTCAATCCTCTTTTCAAAGATGCATCAAAATTTCTGATTATCTGTCTTCATTCAATGGTTCCTTCTAAAGAGCAAAAGAAGGTATTCAGACGACCTCCTCCTGGTTGTCGCAAAATTATTCTGTCCACTAATATTGCTGAAACGGCCATTACAATTGATGATGTGGTTTATGTTATAGACAGTGGATGGATGAAAGAAAAAAGTTATGATCCTTACAGTAACGTTTCTACTTTTCAATCATCTTGGATATCAAAGGCTAGTGCCAAGCAGCGTGAGGGTCGTGCAGGTCGCTGTCAGCCTGGGATATGCTATCACCTTTATTCAAAGTTTCGTGCATCGTCTCTTCCTGATTTTCAAGTTCCTGAAATTAAGAGAATGCCAATAGAGGAACTCTGTTTGCAGGTGCATTTTTCCTAGTTCTTAGCAATATTTACTAAGATCACATAACCATTCTCTCTAAAACATAATTGTATGTTGAACTGCTTGTTGATTTGTTATTCTGTTGCATAATTGTACCAAAGCTTAATGTGGCTGAGTAGTTGTGAGAAGAGAGTGGCATTGAACTCAACTTGGTTGATTACCTACTCAACTGATTTGCTAACCATTGTTGACAGTAAAAACGGTAACTCACAGTGATACATGGTTTTTTTTTAGAACCACGGAATATATGAATTAATTTCATTAAATTCTGACCAACAGATTTCGGATCTCAGTTTTACATTTTCCTTATTATGCATACTATATAAGTTGATATGTGGTTGGATCTAAGCTATTCCTAATTTTAGAATCCCCTTTGATTTGTTTTTGCCCATGCAAATTGTTTCCAGAGGGATATGTATTCTTTTCAGATATAGTCTGAATTATGTGCTTTTTTGAAGTATTAGGAACCCCGTTTTTAATATTGAAATGTATTCTTCACTTGAGCATCCCCTAATTGTTCTAATTGTGTATTTATTTCAAAGGTGAAATTGCTTGATCCCAATTGTAAGATAGAGGATTTCTTGCAGAAGACTTTGGATCCTCCAGTTTTTGATACTATCCGTAATGCAATCTTAGTCCTTCAGGATATTGGGGCTTTGTCACTAGATGAGAAACTGACTGAGCTGGGGAAGAAATTAGGTTCATTGCCTGTCCATCCAGTAACAAGCAAGATGCTTATCTTCGCCATACTGATGAACTGCCTTGATCCTGCTCTAACTCTGGCTTGTGCTTCGGACTACAAGGACCCTTTCACTCTTCCAATGTTACCAAGCGAACGAAAGAAAGCTGCTGCTGCTAAAGCTGAGCTTGCTTCTTTGTATGGTGGGCATAGTGATCAACTGGCTGTTGTAGCTGCATTTGATTGCTGGAAAAATGCTAAAGGAAGGGGTGAAGAGGTCCGTTTCTGTTCTAAATACTACATCTCTTCAAGCACTATGACTATGTTATCTGGCATGCGGAGACAACTTGAGATGGAACTAGTTCAAAATGGTTTTATACCTGAGGATGTTTCAACTTGCAACTTGAATGCTTGTGACCCTGGCATACTCCACGCTGTCCTTGTGGCTGGTTTATATCCAATGGTGGGAAGATTACTTCCACCCCAGAAAAAGGGAAAGCGGGCTGTCGTTGAAACTGGTTCAGGGAGCAGAGTTCTTTTGCACCCACATTCCCTTAACTTTGAACTGTCACTCAAGCAAACAGATAGCCATCCTCTAATTGTTTATGATGAGATAACCCGTGGGGACGGTGGTACACACATTAGAAACTGCACTGTTGTTGGGCCTCTCCCATTATTAATGGTTGCAAAGGACATTGCTGTTGCCCCTGCTAAGGAGAGCGATAATTGCAAAGGTGGTACCGAAAATAACAATAATGGCAATGGCGAAGCTGGTATAGATGAAACTGCTCAAGAGAAGATGGATATAGAAAATAATTCAAATCAACAGCCAGAAGAGATGATTATGTCCTCCCCCGATAACTCAGTAACTGTGGTTGTTGACCGTTGGCTGCAGTTTTGGTCAAAGGCACTTGATATTGCTCAGTTATACTGCTTGAGAGAGCGATTATCTTCAGCAATCTTATTCAAAGTAAGTGGTTATAGACTCGTATTCATGGTTTCAAACTTGCTCACACTTTCTGCATTATTGTAATAACTTTTTACTGCGTTTCAGGTAAAGCATCCAAATGGAGTTCTTCCTCCTGTTCTTGGGGCCTCTATGCATGCCTTGGCTTGCATTCTATCTTATGATGGCTTATCTGGTATTTCATTAGAATCAGTAGAAATGTTGACGTCGATGGTAAATGCAACTGAAATTGGCCATTTTGCACCTGGGAGGTCCGTGGGAACACATAAGAAAGTAAGTTGGTTTCATAAATCACATCCAAATTATAATGATTTTACTGTTCCCGAAGCTAATGGAACATCAATTTTGAATGATCCGTTAAGTCAGAATCTTTTACCAACACCTGATTTTAGAACAGCAAACCCAAGCGACCCATCGAGCCCTTATTTTAGGGCTTCACCCAATTCAGTCTATGCAAGGTCGACACCACAGTCACAGAGAGAGCAAGATGCTGCCCAGCAGCAGCAGCAGCAACAGCATGCTCAAGAGCACAACACACGTAAACAAAGAAAGTCCCACAAGGAGCGCATGGCAGCTAAACAACAGAAGCCTCCATCCGGAGGCCTCAGTTTAAATGGGTATGGATTAAACACGTATGGACCATACGGCCCTCGGGGTATCTCTCTAAAGCGGCCGCGTGGTAACGGTGTGGGTTAACATCTAACCTCTAACGTAAAAAAAGTAAACAAGTAATCTTCAGGTGACTGAACTCGGTGGATGTATTGTAATAGCTTCAGATGAGCATCCTATGGTGATGTGTGGCTTCTCTGTAGTCTCTGATCAATTATTAATTGAAACTATGACGCTCAGTTATGACTGGAGGTAAAGCCATTACCTTGCATCTTTGGCTTAGCTTATTTCATGCGATCCTTTTGCTGTTTTTTAGTGATTTTTCGGTGTCCAACAACAGTGTTTTGTTTTTACTGGTAATCTTGTCAGCCAGCATCTTATTATCTGTTCCAATTTTTCCTTGTTGCTCTTCGACAGATGTCTAGTGGTTCAGGCCTCAGGGGAATGGAACTCTGCTGCTCTTGTAGATGAAACAAGCATCATACGAATCCATCCATTATAGTTCGCTTTCAGGTACAATTGTAATTATAGTAGATGACAGGGCTCGGTTTTCGCCTTTCCGAGCATCAATGCAATACTGGCTCTTGGGTATATCGTTCTGGGTTTCAGGACATTAGAACAGATGTGTTAGTATAATGATATTATTGTCAATGAGAGGGTATATGATTGCTTATAACTCTTCTCAATTCTCTCTGTATACAAATCTCACTTACTAGCCATGCTATGAGATTGGGACTAGCTTATGGCTCGAGTAGTATGTTATTTTCTCTGCCATGTCATAAACTGAGAAATTTACTCATTTGTTTTTAGATGATCTGATAGATATACAACTCTTTTGCACAATTTGGC

mRNA sequence

AGAGAGGGGTGAAGAGAGAAGTTACACGGTTGATGAAAGGCGATGGAAAAGCAAGCGCCATTAATACATTAGGGCACTACTCAATGTTTCAAATGTTGTCTCTGTCTCCTGTCTCTTCTTCTACTTTTTAGTTTTCTTATAACTGAAGAAAAAAGAAGAAAAAGCTTCTGAAACCAGTGGGAGGAGGAAGGAAGAAGCTTCAGCTAGAAAAGTAATGGCGAAGAAGAAGCAGAAGAAGGGGGAGCAAAAGCCTAAATCCAAACCAATTTCAAACGTGGGTTGTGCAATTACACAAGCACTCGAACGGTTTTGCCTGACCAATGACGAAGTTTTCACTTTCGAAGCTGATCTTTCGAAGCGTGAACGTGCTCTCGTGCATGAAGTGTGCAGGAAAATGGGTATGACATCAAAGAGTTCTGGGCATGGAGACCAACGACGTGTGTCTGTATATAAATCCAAACTGCAAATGGAGACGATGAAATTTTCTGAAAAAACCAAAACTGTTTTGGACGACTTGTTTAGTATGTATCCTCCCGATGATGGAGAGTTGGGCAAGGAGACAGTTGGGAACCACAATAAAAAGGCTGATAAGCAAAGGCGTAAGAAAGATGACATTTTCTGGAGGCCGTCAATGAACAAGGAAGAGCTAATGAAGAAATTGGGATCATATACTATGAAGAGTGTTGCTAATATGAAAAAGATCGCAGAAGAGAGATCTAAGCTTCCAATTGCATCATTTCGAGATGTCATTACTTCAACAGTTGAATCTCATCAGGTCGTTCTCATATCTGGTGAGACTGGGTGTGGAAAGACAACGCAGGTCCCTCAGTTTCTTTTGGATTATATGTGGGGTAAGGGAGAGACGTGTAAGATAGTTTGTACCCAACCTCGACGAATATCTGCTGTATCAGTTTCTGAGCGAATCTCCTATGAAAGAGGAGAAAATGTTGGAAGTGATATTGGATACAAGATACGACTGGAAAGTAAAGGTGGTAGACACTCATCAATCGTACTCTGTACGAATGGCATTCTCTTAAGGGTGCTGATTTCAGAGGGGTTGGGCAAATTAACAATGGAAGCCTCCAGAAAGAGTAGGAAAAATGTTGTGTCGGACTTAACTCACATTATTGTGGATGAAGTTCATGAAAGGGACCGTTACTCTGACTTCATTCTAACAATTTTGAGAGACTTGCTTCCATCGTATCCTCAGTTAAGGCTGATACTCATGAGTGCTACAATTGATGCTGAACGGTTTTCAAAGTATTTTGGAGGCTGTCCAATCATCAACGTTCCTGGATTCACCTATCCTGTAAAAAATTTCTATCTGGAGGATGTACTTTCTATAGTGAAATCTTCAGAAGAGAACCACCTTGATGACAGTATAGTGGGTGTTTCAGATGAGGAACCTGAGCTAACTGAAGAAGACAAGCTTGCTTTGGATGAATCGATTGACATGGCTTGGTTGAATGGCGAATTCGATCCCCTTCTAGAATTGGTTGCTTCTGGTGGATCCTCTCAAATTTTCAATTATCAGCATTCCGTGACTGGGCTAACACCTCTGATGGTTCTTGCTGGAAAGGGTAGAGTTTCCGATGTTTGCATGCTGCTATCTTTTGGTGCTATGTGTGAATTACAGGCCAAGGATGGCACAACTGCATTGGAATTGGCTGAACGAGGAGATCAGAAAGAAACTGCTGAAGCCATCAGAAAACATTTGGAAAATTCCATGTCCAACTCCAAGGAAGAACGTCGGTTAATTGGTGCATATCTTGCAAAAAATTCTAATTCTGTTGATGTTCGTCTTATAGAGCAGTTGTTAGGAAAAATATGTCTTGATTCAAAAGAAGGAGCTATTCTTGTTTTCCTTCCTGGGTGGGATGACATTAGCAAGACTCGAGAAAGATTATCAGTCAATCCTCTTTTCAAAGATGCATCAAAATTTCTGATTATCTGTCTTCATTCAATGGTTCCTTCTAAAGAGCAAAAGAAGGTATTCAGACGACCTCCTCCTGGTTGTCGCAAAATTATTCTGTCCACTAATATTGCTGAAACGGCCATTACAATTGATGATGTGGTTTATGTTATAGACAGTGGATGGATGAAAGAAAAAAGTTATGATCCTTACAGTAACGTTTCTACTTTTCAATCATCTTGGATATCAAAGGCTAGTGCCAAGCAGCGTGAGGGTCGTGCAGGTCGCTGTCAGCCTGGGATATGCTATCACCTTTATTCAAAGTTTCGTGCATCGTCTCTTCCTGATTTTCAAGTTCCTGAAATTAAGAGAATGCCAATAGAGGAACTCTGTTTGCAGGTGAAATTGCTTGATCCCAATTGTAAGATAGAGGATTTCTTGCAGAAGACTTTGGATCCTCCAGTTTTTGATACTATCCGTAATGCAATCTTAGTCCTTCAGGATATTGGGGCTTTGTCACTAGATGAGAAACTGACTGAGCTGGGGAAGAAATTAGGTTCATTGCCTGTCCATCCAGTAACAAGCAAGATGCTTATCTTCGCCATACTGATGAACTGCCTTGATCCTGCTCTAACTCTGGCTTGTGCTTCGGACTACAAGGACCCTTTCACTCTTCCAATGTTACCAAGCGAACGAAAGAAAGCTGCTGCTGCTAAAGCTGAGCTTGCTTCTTTGTATGGTGGGCATAGTGATCAACTGGCTGTTGTAGCTGCATTTGATTGCTGGAAAAATGCTAAAGGAAGGGGTGAAGAGGTCCGTTTCTGTTCTAAATACTACATCTCTTCAAGCACTATGACTATGTTATCTGGCATGCGGAGACAACTTGAGATGGAACTAGTTCAAAATGGTTTTATACCTGAGGATGTTTCAACTTGCAACTTGAATGCTTGTGACCCTGGCATACTCCACGCTGTCCTTGTGGCTGGTTTATATCCAATGGTGGGAAGATTACTTCCACCCCAGAAAAAGGGAAAGCGGGCTGTCGTTGAAACTGGTTCAGGGAGCAGAGTTCTTTTGCACCCACATTCCCTTAACTTTGAACTGTCACTCAAGCAAACAGATAGCCATCCTCTAATTGTTTATGATGAGATAACCCGTGGGGACGGTGGTACACACATTAGAAACTGCACTGTTGTTGGGCCTCTCCCATTATTAATGGTTGCAAAGGACATTGCTGTTGCCCCTGCTAAGGAGAGCGATAATTGCAAAGGTGGTACCGAAAATAACAATAATGGCAATGGCGAAGCTGGTATAGATGAAACTGCTCAAGAGAAGATGGATATAGAAAATAATTCAAATCAACAGCCAGAAGAGATGATTATGTCCTCCCCCGATAACTCAGTAACTGTGGTTGTTGACCGTTGGCTGCAGTTTTGGTCAAAGGCACTTGATATTGCTCAGTTATACTGCTTGAGAGAGCGATTATCTTCAGCAATCTTATTCAAAGTAAAGCATCCAAATGGAGTTCTTCCTCCTGTTCTTGGGGCCTCTATGCATGCCTTGGCTTGCATTCTATCTTATGATGGCTTATCTGGTATTTCATTAGAATCAGTAGAAATGTTGACGTCGATGGTAAATGCAACTGAAATTGGCCATTTTGCACCTGGGAGGTCCGTGGGAACACATAAGAAAGTAAGTTGGTTTCATAAATCACATCCAAATTATAATGATTTTACTGTTCCCGAAGCTAATGGAACATCAATTTTGAATGATCCGTTAAGTCAGAATCTTTTACCAACACCTGATTTTAGAACAGCAAACCCAAGCGACCCATCGAGCCCTTATTTTAGGGCTTCACCCAATTCAGTCTATGCAAGGTCGACACCACAGTCACAGAGAGAGCAAGATGCTGCCCAGCAGCAGCAGCAGCAACAGCATGCTCAAGAGCACAACACACGTAAACAAAGAAAGTCCCACAAGGAGCGCATGGCAGCTAAACAACAGAAGCCTCCATCCGGAGGCCTCAGTTTAAATGGGTATGGATTAAACACGTATGGACCATACGGCCCTCGGGGTATCTCTCTAAAGCGGCCGCGTGGTAACGGTGTGGGTTAACATCTAACCTCTAACGTAAAAAAAGTAAACAAGTAATCTTCAGGTGACTGAACTCGGTGGATGTATTGTAATAGCTTCAGATGAGCATCCTATGGTGATGTGTGGCTTCTCTGTAGTCTCTGATCAATTATTAATTGAAACTATGACGCTCAGTTATGACTGGAGATGTCTAGTGGTTCAGGCCTCAGGGGAATGGAACTCTGCTGCTCTTGTAGATGAAACAAGCATCATACGAATCCATCCATTATAGTTCGCTTTCAGGTACAATTGTAATTATAGTAGATGACAGGGCTCGGTTTTCGCCTTTCCGAGCATCAATGCAATACTGGCTCTTGGGTATATCGTTCTGGGTTTCAGGACATTAGAACAGATGTGTTAGTATAATGATATTATTGTCAATGAGAGGGTATATGATTGCTTATAACTCTTCTCAATTCTCTCTGTATACAAATCTCACTTACTAGCCATGCTATGAGATTGGGACTAGCTTATGGCTCGAGTAGTATGTTATTTTCTCTGCCATGTCATAAACTGAGAAATTTACTCATTTGTTTTTAGATGATCTGATAGATATACAACTCTTTTGCACAATTTGGC

Coding sequence (CDS)

ATGGCGAAGAAGAAGCAGAAGAAGGGGGAGCAAAAGCCTAAATCCAAACCAATTTCAAACGTGGGTTGTGCAATTACACAAGCACTCGAACGGTTTTGCCTGACCAATGACGAAGTTTTCACTTTCGAAGCTGATCTTTCGAAGCGTGAACGTGCTCTCGTGCATGAAGTGTGCAGGAAAATGGGTATGACATCAAAGAGTTCTGGGCATGGAGACCAACGACGTGTGTCTGTATATAAATCCAAACTGCAAATGGAGACGATGAAATTTTCTGAAAAAACCAAAACTGTTTTGGACGACTTGTTTAGTATGTATCCTCCCGATGATGGAGAGTTGGGCAAGGAGACAGTTGGGAACCACAATAAAAAGGCTGATAAGCAAAGGCGTAAGAAAGATGACATTTTCTGGAGGCCGTCAATGAACAAGGAAGAGCTAATGAAGAAATTGGGATCATATACTATGAAGAGTGTTGCTAATATGAAAAAGATCGCAGAAGAGAGATCTAAGCTTCCAATTGCATCATTTCGAGATGTCATTACTTCAACAGTTGAATCTCATCAGGTCGTTCTCATATCTGGTGAGACTGGGTGTGGAAAGACAACGCAGGTCCCTCAGTTTCTTTTGGATTATATGTGGGGTAAGGGAGAGACGTGTAAGATAGTTTGTACCCAACCTCGACGAATATCTGCTGTATCAGTTTCTGAGCGAATCTCCTATGAAAGAGGAGAAAATGTTGGAAGTGATATTGGATACAAGATACGACTGGAAAGTAAAGGTGGTAGACACTCATCAATCGTACTCTGTACGAATGGCATTCTCTTAAGGGTGCTGATTTCAGAGGGGTTGGGCAAATTAACAATGGAAGCCTCCAGAAAGAGTAGGAAAAATGTTGTGTCGGACTTAACTCACATTATTGTGGATGAAGTTCATGAAAGGGACCGTTACTCTGACTTCATTCTAACAATTTTGAGAGACTTGCTTCCATCGTATCCTCAGTTAAGGCTGATACTCATGAGTGCTACAATTGATGCTGAACGGTTTTCAAAGTATTTTGGAGGCTGTCCAATCATCAACGTTCCTGGATTCACCTATCCTGTAAAAAATTTCTATCTGGAGGATGTACTTTCTATAGTGAAATCTTCAGAAGAGAACCACCTTGATGACAGTATAGTGGGTGTTTCAGATGAGGAACCTGAGCTAACTGAAGAAGACAAGCTTGCTTTGGATGAATCGATTGACATGGCTTGGTTGAATGGCGAATTCGATCCCCTTCTAGAATTGGTTGCTTCTGGTGGATCCTCTCAAATTTTCAATTATCAGCATTCCGTGACTGGGCTAACACCTCTGATGGTTCTTGCTGGAAAGGGTAGAGTTTCCGATGTTTGCATGCTGCTATCTTTTGGTGCTATGTGTGAATTACAGGCCAAGGATGGCACAACTGCATTGGAATTGGCTGAACGAGGAGATCAGAAAGAAACTGCTGAAGCCATCAGAAAACATTTGGAAAATTCCATGTCCAACTCCAAGGAAGAACGTCGGTTAATTGGTGCATATCTTGCAAAAAATTCTAATTCTGTTGATGTTCGTCTTATAGAGCAGTTGTTAGGAAAAATATGTCTTGATTCAAAAGAAGGAGCTATTCTTGTTTTCCTTCCTGGGTGGGATGACATTAGCAAGACTCGAGAAAGATTATCAGTCAATCCTCTTTTCAAAGATGCATCAAAATTTCTGATTATCTGTCTTCATTCAATGGTTCCTTCTAAAGAGCAAAAGAAGGTATTCAGACGACCTCCTCCTGGTTGTCGCAAAATTATTCTGTCCACTAATATTGCTGAAACGGCCATTACAATTGATGATGTGGTTTATGTTATAGACAGTGGATGGATGAAAGAAAAAAGTTATGATCCTTACAGTAACGTTTCTACTTTTCAATCATCTTGGATATCAAAGGCTAGTGCCAAGCAGCGTGAGGGTCGTGCAGGTCGCTGTCAGCCTGGGATATGCTATCACCTTTATTCAAAGTTTCGTGCATCGTCTCTTCCTGATTTTCAAGTTCCTGAAATTAAGAGAATGCCAATAGAGGAACTCTGTTTGCAGGTGAAATTGCTTGATCCCAATTGTAAGATAGAGGATTTCTTGCAGAAGACTTTGGATCCTCCAGTTTTTGATACTATCCGTAATGCAATCTTAGTCCTTCAGGATATTGGGGCTTTGTCACTAGATGAGAAACTGACTGAGCTGGGGAAGAAATTAGGTTCATTGCCTGTCCATCCAGTAACAAGCAAGATGCTTATCTTCGCCATACTGATGAACTGCCTTGATCCTGCTCTAACTCTGGCTTGTGCTTCGGACTACAAGGACCCTTTCACTCTTCCAATGTTACCAAGCGAACGAAAGAAAGCTGCTGCTGCTAAAGCTGAGCTTGCTTCTTTGTATGGTGGGCATAGTGATCAACTGGCTGTTGTAGCTGCATTTGATTGCTGGAAAAATGCTAAAGGAAGGGGTGAAGAGGTCCGTTTCTGTTCTAAATACTACATCTCTTCAAGCACTATGACTATGTTATCTGGCATGCGGAGACAACTTGAGATGGAACTAGTTCAAAATGGTTTTATACCTGAGGATGTTTCAACTTGCAACTTGAATGCTTGTGACCCTGGCATACTCCACGCTGTCCTTGTGGCTGGTTTATATCCAATGGTGGGAAGATTACTTCCACCCCAGAAAAAGGGAAAGCGGGCTGTCGTTGAAACTGGTTCAGGGAGCAGAGTTCTTTTGCACCCACATTCCCTTAACTTTGAACTGTCACTCAAGCAAACAGATAGCCATCCTCTAATTGTTTATGATGAGATAACCCGTGGGGACGGTGGTACACACATTAGAAACTGCACTGTTGTTGGGCCTCTCCCATTATTAATGGTTGCAAAGGACATTGCTGTTGCCCCTGCTAAGGAGAGCGATAATTGCAAAGGTGGTACCGAAAATAACAATAATGGCAATGGCGAAGCTGGTATAGATGAAACTGCTCAAGAGAAGATGGATATAGAAAATAATTCAAATCAACAGCCAGAAGAGATGATTATGTCCTCCCCCGATAACTCAGTAACTGTGGTTGTTGACCGTTGGCTGCAGTTTTGGTCAAAGGCACTTGATATTGCTCAGTTATACTGCTTGAGAGAGCGATTATCTTCAGCAATCTTATTCAAAGTAAAGCATCCAAATGGAGTTCTTCCTCCTGTTCTTGGGGCCTCTATGCATGCCTTGGCTTGCATTCTATCTTATGATGGCTTATCTGGTATTTCATTAGAATCAGTAGAAATGTTGACGTCGATGGTAAATGCAACTGAAATTGGCCATTTTGCACCTGGGAGGTCCGTGGGAACACATAAGAAAGTAAGTTGGTTTCATAAATCACATCCAAATTATAATGATTTTACTGTTCCCGAAGCTAATGGAACATCAATTTTGAATGATCCGTTAAGTCAGAATCTTTTACCAACACCTGATTTTAGAACAGCAAACCCAAGCGACCCATCGAGCCCTTATTTTAGGGCTTCACCCAATTCAGTCTATGCAAGGTCGACACCACAGTCACAGAGAGAGCAAGATGCTGCCCAGCAGCAGCAGCAGCAACAGCATGCTCAAGAGCACAACACACGTAAACAAAGAAAGTCCCACAAGGAGCGCATGGCAGCTAAACAACAGAAGCCTCCATCCGGAGGCCTCAGTTTAAATGGGTATGGATTAAACACGTATGGACCATACGGCCCTCGGGGTATCTCTCTAAAGCGGCCGCGTGGTAACGGTGTGGGTTAA

Protein sequence

MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRKMGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNHNKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNGEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSNQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHPNYNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQREQDAAQQQQQQQHAQEHNTRKQRKSHKERMAAKQQKPPSGGLSLNGYGLNTYGPYGPRGISLKRPRGNGVG

Homology

[Close]

BLAST of PI0021968 vs. ExPASy Swiss-Prot
Match: F4INY4 (DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana OX=3702 GN=HVT1 PE=2 SV=1)

HSP 1 Score: 1322.8 bits (3422), Expect = 0.0e+00
Identity = 684/1131 (60.48%), Postives = 855/1131 (75.60%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            M  K+ +      K   +       T+ +E F  + +EV+TFE +LS  ER ++H++CRK
Sbjct: 1    MGNKRFRSDNNAGKPTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRK 60

Query: 61   MGMTSKSSGHGDQRRVSVYKS---------------KLQMETMKFSEKTKTVLDDLFSMY 120
            MG+ SKSSG G+QRR+S++KS               K +++ + F      +L +LF+ Y
Sbjct: 61   MGIQSKSSGRGEQRRLSIFKSRHKNGNKNEANEKSNKEKLKCVSFPPGADVILQELFTHY 120

Query: 121  PPDDGELGKETVGNHNKKADKQRRKKDDIFWRPSMNKEELMKKLGSYT--MKSVANMKKI 180
            PP DG+    +   ++    KQ + KDD F +P ++ EE+++K+ S +  +K    +K+I
Sbjct: 121  PPCDGDTAATSFTKYSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEI 180

Query: 181  AEERSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMW-GKGETCKIVC 240
             + RSKLPI SF+D ITS VES+QV+LISGETGCGKTTQVPQ+LLD+MW  K ETCKIVC
Sbjct: 181  TKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVC 240

Query: 241  TQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL 300
            TQPRRISA+SVSERIS ERGE++G +IGYK+RL+SKGGRHSS+V CTNGILLRVL+ +G 
Sbjct: 241  TQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG- 300

Query: 301  GKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATI 360
                         + VSD+THIIVDE+HERD YSDF+L I+RDLLPS P LRLILMSAT+
Sbjct: 301  -----------SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATL 360

Query: 361  DAERFSKYFGGCPIINVPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTE 420
            DAERFS YFGGCP++ VPGFTYPV+  YLEDVLSI+KS  +NHL  + + +SD + +LT+
Sbjct: 361  DAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTD 420

Query: 421  EDKLALDESIDMAWLNGEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVC 480
            EDKLALDE+I +AW N EFD LL+LV+S GS +I+NYQH  T LTPLMV AGKGR+SDVC
Sbjct: 421  EDKLALDEAIILAWTNDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVC 480

Query: 481  MLLSFGAMCELQAKDGTTALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAK- 540
            MLLSFGA   L++KDG TALELAE  +Q E A+ IR+H +NS SNS++ ++L+  Y+A  
Sbjct: 481  MLLSFGADWSLKSKDGMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATI 540

Query: 541  NSNSVDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICL 600
            N   VDV LI+QL+ KIC DS++GAILVFLPGWDDI+KTR+RL  NP F D++KF IICL
Sbjct: 541  NPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICL 600

Query: 601  HSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVS 660
            HSMVP+ EQKKVF RPPPGCRKI+L+TNIAE+A+TIDDVVYVIDSG MKEKSYDPY+NVS
Sbjct: 601  HSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVS 660

Query: 661  TFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVK 720
            T QSSW+SKA+AKQR+GRAGRCQPGICYHLYS+ RA+S+PDF+VPEIKRMP+EELCLQVK
Sbjct: 661  TLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVK 720

Query: 721  LLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTS 780
            +LDPNCK  DFLQK LDPPV  +I NA+ +LQDIGAL+  E+LTELG+K G LPVHP+ S
Sbjct: 721  ILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLIS 780

Query: 781  KMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAV 840
            KML FA+L+NCLDPALTLACA+DYK+PFT+PM P ER+KAAAAK ELASL GG SD LAV
Sbjct: 781  KMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAV 840

Query: 841  VAAFDCWKNAKGRGEEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLN 900
            VAAF+CWKNAKGRG    FCS+Y++S S M ML  MR QLE EL ++G IP D+S+C+ N
Sbjct: 841  VAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQN 900

Query: 901  ACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDS 960
            + DPGIL AVL  GLYPMVGRL P     +R +VET SG++V +H  S NF LS K+ D 
Sbjct: 901  SRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYD- 960

Query: 961  HPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGE 1020
              L+V+DEITRGDGG HIRNCTV   LPLL+++ +IAVAP   SD+     E  ++    
Sbjct: 961  ESLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTGSSDSDDSNEEEEDDEEVA 1020

Query: 1021 AGIDE-----TAQEKMDIENNSNQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYC 1080
            A  +E     T +E MDI    +++  +M MSSP+NSV +VVDRWL F + AL++AQ+Y 
Sbjct: 1021 ANTNEEVAANTNEEGMDIHKEESRRGAKM-MSSPENSVKLVVDRWLPFRTTALEVAQMYI 1080

Query: 1081 LRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLESVEML 1108
            LRERL ++ILFKV HP   LPP LGASMHA+A ILSYDG +G+S     M+
Sbjct: 1081 LRERLMASILFKVTHPREHLPPHLGASMHAIAGILSYDGHAGLSCPPESMV 1117

[Close]

BLAST of PI0021968 vs. ExPASy Swiss-Prot
Match: F4IDQ6 (DExH-box ATP-dependent RNA helicase DExH2 OS=Arabidopsis thaliana OX=3702 GN=NIH PE=1 SV=1)

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 640/1175 (54.47%), Postives = 828/1175 (70.47%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            MAKKK    +    ++     G   T+ LE F  + ++ + FE  L+  ER ++H++CR 
Sbjct: 1    MAKKK----KDTKHTRLCEATGAWATKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRT 60

Query: 61   MGMTSKSSGHGDQRRVSVYK------------------------------SKLQMET--- 120
            MG+ SKS+G G++RR+S++K                              SK + ET   
Sbjct: 61   MGLRSKSNGSGEERRLSLFKGDGISKSDKRRMYEARNQKEKEGDGISKSYSKHRYETRFQ 120

Query: 121  -----------------MKFSEKTKTVLDDLFSMYPPDDGE-----LGKETVGNHNKKAD 180
                             + F  + K VL DLF+ YPP DG+     LG  T GN N    
Sbjct: 121  KAGGIRKTRISPKKLKCVSFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTTGNVNS--- 180

Query: 181  KQRRKKDDIFWRPSMNKEELMKKLGSYT--MKSVANMKKIAEERSKLPIASFRDVITSTV 240
                 KDD F +P M K ++   + S +  +K   + ++I E RSKLPIASFRD I S V
Sbjct: 181  ---NWKDDFFKKPHMTKHDIENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAV 240

Query: 241  ESHQVVLISGETGCGKTTQVPQFLLDYMW-GKGETCKIVCTQPRRISAVSVSERISYERG 300
            ES+QVVLI+GETGCGKTTQVPQ+LLD+MW  K E CKI+CTQPRRISA+SVS+RIS+ERG
Sbjct: 241  ESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISWERG 300

Query: 301  ENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLT 360
            E +G  +GYK+RL+S+GGR SS+V CTNGILLRVLI +G+             + V D+T
Sbjct: 301  ETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGV------------NSSVPDIT 360

Query: 361  HIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVPGF 420
            HIIVDE+HERD YSDF+L ILRDLLPS P LRLILMSAT+DAERFS+YFGGCP++ VPGF
Sbjct: 361  HIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGF 420

Query: 421  TYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNGEFD 480
            TYPV+ F+L+D LS++ S + +HL      +S  + +  +EDK++LDE+ID+AW N EFD
Sbjct: 421  TYPVRTFFLDDALSVLNSDKNSHL------LSAVKRDFKDEDKVSLDEAIDLAWTNDEFD 480

Query: 481  PLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTAL 540
             L++LV+S GS + +NYQ+S TGLTPLMV AGKGRVSDVC LLS GA C L++K+G TAL
Sbjct: 481  CLVDLVSSEGSHEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLSVGADCTLKSKEGITAL 540

Query: 541  ELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAK-NSNSVDVRLIEQLLGKICLD 600
            ELAE+ +Q ETA+ IR+H  N  SNS++ + L+  Y+A      VDV LI +L+ KIC D
Sbjct: 541  ELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSD 600

Query: 601  SKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGC 660
            SK+GAILVFLPGW++ISKT+E+L  +  F  ++KF+I+CLHS VP++EQKKVF RPP GC
Sbjct: 601  SKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGC 660

Query: 661  RKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAG 720
            RKI+L+TNIAE+A+TIDDVVYVIDSG MKEKSYDPY++VST QSSW+SKA+AKQR GRAG
Sbjct: 661  RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAG 720

Query: 721  RCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPPV 780
            RCQ GICYHLYSK RA+SLP+++VPE+ RMP++ELCLQVK+LDPNC + DFLQK +DPPV
Sbjct: 721  RCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPV 780

Query: 781  FDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLAC 840
              +I NA+++L+DIGAL+ +E+LTELG+K G LPVHP  SKM+ FAIL+NCLDPAL LAC
Sbjct: 781  AQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILAC 840

Query: 841  ASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVRFC 900
            A+D KDPFT+P+ P +RKKAAAAK ELASLYG HSD LA VAAF CWKNAK  G+   FC
Sbjct: 841  AADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFC 900

Query: 901  SKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMVG 960
            SKY+IS   M  L  + R+L+ EL ++G IP   S C+LNA DPGIL AV+  GLYPM+G
Sbjct: 901  SKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPMLG 960

Query: 961  RLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHIRN 1020
            R+ P  K   R+V+ET +G++V +   S N ++S  + D   LIV+DEITRGD G  IR+
Sbjct: 961  RMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFD-EALIVFDEITRGDWGVVIRS 1020

Query: 1021 CTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSNQQ 1080
            CTV+  +P+L+ +++IAV+  +  D  K   E ++   G  G      + MDI+     +
Sbjct: 1021 CTVLPTIPVLLFSREIAVSTTESYDAVKSDDEEDHK-VGNVG------DAMDIDKEVG-R 1080

Query: 1081 PEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVLG 1115
            P E IM  P+NSV VVVDRWL F   A +IAQ+Y LRERL ++ILFKVKHP   LPP LG
Sbjct: 1081 PGEKIMLGPENSVKVVVDRWLPFKVTAFEIAQMYILRERLMASILFKVKHPKENLPPHLG 1138

[Close]

BLAST of PI0021968 vs. ExPASy Swiss-Prot
Match: Q9H6S0 (3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2)

HSP 1 Score: 597.4 bits (1539), Expect = 3.7e-169
Identity = 404/1173 (34.44%), Postives = 616/1173 (52.51%), Query Frame = 0


Query: 21   VGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRKMGMTSKSSGHGDQRRVSVYK 80
            V  A+  ALERF   +     F + L+  ERA +H + + +G+ SKS G G  R ++V K
Sbjct: 45   VKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKK 104

Query: 81   -----SKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNHNKKADKQRRKKDDIF 140
                 +   M T   +  TK  +  L   +P          V N  +     + ++ ++F
Sbjct: 105  KDGSETAHAMMTCNLTHNTKHAVRSLIQRFP----------VTNKERTELLPKTERGNVF 164

Query: 141  WRPSMNKEELMKKLGSYTMKSVANM------KKIAEERSKLPIASFRDVITSTVESHQVV 200
               + N+E  M K        +  +       +    R  LP+   ++ I   ++ ++VV
Sbjct: 165  AVEAENRE--MSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVV 224

Query: 201  LISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDI 260
            LI GETG GKTTQ+PQFLLD  +  G  C+I CTQPRR++A++V+ER++ ER E +G  I
Sbjct: 225  LIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTI 284

Query: 261  GYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLTHIIVDEV 320
            GY+IRLES+    + +  CTNG+LLR L+              +  + +S +TH+IVDEV
Sbjct: 285  GYQIRLESRVSPKTLLTFCTNGVLLRTLM--------------AGDSTLSTVTHVIVDEV 344

Query: 321  HERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVPGFTYPVKNF 380
            HERDR+SDF+LT LRDLL  +P L+LIL SA +D   F +YFG CP+I + G  + VK  
Sbjct: 345  HERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEM 404

Query: 381  YLEDVL--------SIVKSSEENHLDD-------------------------SIVGVSDE 440
            +LED+L         ++K  +E   ++                         +++ V+DE
Sbjct: 405  FLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQRTVLNVTDE 464

Query: 441  E-----------PELTEEDKLAL--------DESIDMAWLNGEFDPLLELVASGGSSQI- 500
                         +LTE+D   L        D  +   WL+ + D   ++     +  + 
Sbjct: 465  YDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIDAFAQVFHLILTENVS 524

Query: 501  FNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEA 560
             +Y+HS T  T LMV AG+G  S V  L+S GA    +A +G  AL+ A+   Q E  + 
Sbjct: 525  VDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDL 584

Query: 561  IRKH---LE------------NSMSNSKEERRLIGAY-LAKNSNSVDVRLIEQLLGKICL 620
            +  +   LE            N    S E+R L+ AY  + +   VD+ LI  LL  IC 
Sbjct: 585  LESYSATLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICH 644

Query: 621  DSKEGAILVFLPGWDDISKTRER-LSVNPLFKDAS-KFLIICLHSMVPSKEQKKVFRRPP 680
                GA+L+FLPG+D+I   R+R L  +  F D++ ++ +  LHS + + +QKKV + PP
Sbjct: 645  SCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPP 704

Query: 681  PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 740
             G RKIILSTNIAET+IT++DVV+VIDSG +KEKS+D  + V+  +  WISKASA QR+G
Sbjct: 705  AGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKG 764

Query: 741  RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDP-NCKIEDFLQKTL 800
            RAGRC+PGIC+ L+S+ R  ++ +FQ PE+ RMP++ELCL  KLL P NC I DFL K  
Sbjct: 765  RAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAP 824

Query: 801  DPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPAL 860
            +PP    +RNA+ +L+ I A+   E LTELG  L  LPV P   KM++ A+++ CLDP L
Sbjct: 825  EPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 884

Query: 861  TLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEE 920
            T+AC   Y+DPF LP   S+++ A   +    +  G  SD +A++ AF  W+ A+  G E
Sbjct: 885  TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARSDGWE 944

Query: 921  VRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPE----DVSTCNLNACDPGILHAVLV 980
              FC K ++S +TM ++ GMR QL  +L  +GF+      D+   N N+ +  ++ A LV
Sbjct: 945  RAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALV 1004

Query: 981  AGLYPMVGRLLPPQKKGKRAVVETG-SGSRVLLHPHSL------------NFELSLKQTD 1040
            AG+YP +  +       +  +V TG    +V  HP S+            N + +  +  
Sbjct: 1005 AGMYPNLVHV------DRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKAL 1064

Query: 1041 SHPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNG 1093
                ++YDE+TR     +IR C+ V P+ +L     +   PA+ + N             
Sbjct: 1065 PTDWLIYDEMTRAHRIANIRCCSAVTPVTIL-----VFCGPARLASN------------- 1124

[Close]

BLAST of PI0021968 vs. ExPASy Swiss-Prot
Match: Q5R746 (3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2)

HSP 1 Score: 595.5 bits (1534), Expect = 1.4e-168
Identity = 403/1177 (34.24%), Postives = 614/1177 (52.17%), Query Frame = 0


Query: 21   VGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRKMGMTSKSSGHGDQRRVSVYK 80
            V  A+  ALERF   +     F + L+  ERA +H + + +G+ SKS G G  R ++V K
Sbjct: 45   VKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKK 104

Query: 81   -----SKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNHNKKADKQRRKKDDIF 140
                 +   M T   +  TK  +  L   +P          V N  +     + ++ ++F
Sbjct: 105  KDGSETAHAMMTCNLTHNTKHAVRSLIQRFP----------VTNKERTELLPKTERGNVF 164

Query: 141  WRPSMNKEELMKKLGSYTMKSVANM------KKIAEERSKLPIASFRDVITSTVESHQVV 200
               + N+E  M K        +  +       +    R  LP+   ++ I   ++ ++VV
Sbjct: 165  AVEAENRE--MSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVV 224

Query: 201  LISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDI 260
            LI GETG GKTTQ+PQFLLD  +  G  C+I CTQPRR++A++V+ER++ ER E +G  I
Sbjct: 225  LIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTI 284

Query: 261  GYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLTHIIVDEV 320
            GY+IRLES+    + +  CTNG+LLR L+              +  + +S +TH+IVDEV
Sbjct: 285  GYQIRLESRVSPKTLLTFCTNGVLLRTLM--------------AGDSTLSTVTHVIVDEV 344

Query: 321  HERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVPGFTYPVKNF 380
            HERDR+SDF+LT LRDLL  +P L+LIL SA +D   F +YFG CP+I + G  + VK  
Sbjct: 345  HERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEM 404

Query: 381  YLEDVL--------SIVKSSEENHLDD-------------------------SIVGVSDE 440
            +LED+L         ++K  +E   ++                         +++ V+DE
Sbjct: 405  FLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPGSQRQRTVLNVTDE 464

Query: 441  E-----------PELTEEDKLAL--------DESIDMAWLNGEFDPLLELVASGGSSQI- 500
                         +LTE+D   L        D  +   WL+ + D   ++     +  + 
Sbjct: 465  YDLLDDGGDAVFSQLTEKDVNCLEPWLVKEMDACLSDIWLHKDIDAFAQVFHLILTENVS 524

Query: 501  FNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEA 560
             +Y+HS T  T LMV AG+G  S V  L+S GA    +A +G  AL+ A+   Q E  + 
Sbjct: 525  VDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDL 584

Query: 561  IRKH---LE------------NSMSNSKEERRLIGAY-LAKNSNSVDVRLIEQLLGKICL 620
            +  +   LE            N    S E+R L+ AY  + +   VD+ LI  LL  IC 
Sbjct: 585  LESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICH 644

Query: 621  DSKEGAILVFLPGWDDISKTRERLSVNPLFKD------ASKFLIICLHSMVPSKEQKKVF 680
                GA+L+FLPG+D+I   R+R+    LF D        ++ +  LHS + + +QKKV 
Sbjct: 645  SCDAGAVLIFLPGYDEIVGLRDRI----LFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 704

Query: 681  RRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAK 740
            + PP G RKIILSTNIAET+IT++DVV+VIDSG +KEKS+D  + V+  +  WISKASA 
Sbjct: 705  KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 764

Query: 741  QREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDP-NCKIEDFL 800
            QR+GRAGRC+PGIC+ L+S+ R  ++ +FQ PE+ RMP++ELCL  KLL P NC + DFL
Sbjct: 765  QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPVADFL 824

Query: 801  QKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCL 860
             K  +PP    +RNA+ +L+ I A+   E LTELG  L  LPV P   KM++ A+++ CL
Sbjct: 825  MKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 884

Query: 861  DPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKG 920
            DP LT+AC   Y+DPF LP   S+++ A   +    +  G  SD +A++ AF  W+ A+ 
Sbjct: 885  DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GAFSDHMALLRAFQAWQKARS 944

Query: 921  RGEEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPE----DVSTCNLNACDPGILH 980
             G E  FC K ++S +TM ++ GMR QL  +L  +GF+      D+   N N+ +  ++ 
Sbjct: 945  DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 1004

Query: 981  AVLVAGLYPMVGRLLPPQKKGKRAVVETG-SGSRVLLHPHSL------------NFELSL 1040
            A LVAG+YP +  +       +  +V TG    +V  HP S+            N + + 
Sbjct: 1005 AALVAGMYPNLVHV------DRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPANGQAAA 1064

Query: 1041 KQTDSHPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNN 1093
             +      ++YDE+TR     +IR C+ V P+ +L     +   PA+ + N         
Sbjct: 1065 IKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTIL-----VFCGPARLASN--------- 1124

[Close]

BLAST of PI0021968 vs. ExPASy Swiss-Prot
Match: B2RR83 (3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.4e-168
Identity = 406/1177 (34.49%), Postives = 612/1177 (52.00%), Query Frame = 0


Query: 21   VGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRKMGMTSKSSGHGDQRRVSVYK 80
            V  A+  ALERF   +     F + L+  ERA +H + + +G+ SKS G G  R ++V K
Sbjct: 60   VKIAVNIALERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKK 119

Query: 81   -----SKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNHNKKADKQRRKKDDIF 140
                 +   M T   +  TK  +  L   +P          V N  +     + ++ ++F
Sbjct: 120  KDGSETAHAMMTCNLTHNTKHAVRSLIQRFP----------VTNKERTELLPKTERGNVF 179

Query: 141  WRPSMNKEELMKKLGSYTMKSVANM------KKIAEERSKLPIASFRDVITSTVESHQVV 200
               + N+E  M K        +  +       +    R  LP+   ++ I   ++ ++VV
Sbjct: 180  AVEAENRE--MSKTSGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVV 239

Query: 201  LISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDI 260
            LI GETG GKTTQ+PQFLLD  +  G  C+I CTQPRR++A++V+ER++ ER E +G  I
Sbjct: 240  LIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTI 299

Query: 261  GYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLTHIIVDEV 320
            GY+IRLES+    + +  CTNG+LLR L+              +  + +S +TH+IVDEV
Sbjct: 300  GYQIRLESRVSPKTLLTFCTNGVLLRTLM--------------AGDSTLSTVTHVIVDEV 359

Query: 321  HERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVPGFTYPVKNF 380
            HERDR+SDF+LT LRDLL  +P L+LIL SA +D   F +YFG CP+I + G  + VK  
Sbjct: 360  HERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEM 419

Query: 381  YLEDVL--------SIVKSSEENHLDD-------------------------SIVGVSDE 440
            +LED+L         ++K  +E   ++                         ++  VS+E
Sbjct: 420  FLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRAVASVSEE 479

Query: 441  E-----------PELTEEDKLAL--------DESIDMAWLNGEFDPLLELVASGGSSQI- 500
                         +LTE+D   L        D  +   WL+ + D   ++     +  + 
Sbjct: 480  YDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVS 539

Query: 501  FNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEA 560
             +Y+HS T  T LMV AG+G  S V  L+S GA    +A +G  AL+ A+   Q E  + 
Sbjct: 540  VDYRHSETSATALMVAAGRGFTSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDL 599

Query: 561  IRKH---LE------------NSMSNSKEERRLIGAY-LAKNSNSVDVRLIEQLLGKICL 620
            +  +   LE            N    S E+R L+ AY  + +   VD+ LI  LL  IC 
Sbjct: 600  LESYSASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICH 659

Query: 621  DSKEGAILVFLPGWDDISKTRERLSVNPLFKD------ASKFLIICLHSMVPSKEQKKVF 680
                GAIL+FLPG+D+I   R+R+    LF D        ++ +  LHS + + +QKKV 
Sbjct: 660  SCDAGAILIFLPGYDEIVGLRDRI----LFDDKRFADNTHRYQVFMLHSNMQTSDQKKVL 719

Query: 681  RRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAK 740
            + PP G RKIILSTNIAET+IT++DVV+VIDSG +KEKS+D  + V+  +  WISKASA 
Sbjct: 720  KNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAI 779

Query: 741  QREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDP-NCKIEDFL 800
            QR+GRAGRC+PGIC+ L+S+ R  ++ +FQ PE+ RMP++ELCL  KLL P NC I DFL
Sbjct: 780  QRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFL 839

Query: 801  QKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCL 860
             K  +PP    +RNA+ +L+ I A+   E LTELG  L  LPV P   KM++ A+++ CL
Sbjct: 840  MKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCL 899

Query: 861  DPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKG 920
            DP LT+AC   Y+DPF LP   S+++ A   +    +  G  SD +A++ AF  W+ A+ 
Sbjct: 900  DPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTA--GTFSDHMALLRAFQAWQKARS 959

Query: 921  RGEEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPE----DVSTCNLNACDPGILH 980
             G E  FC K ++S +TM ++ GMR QL  +L  +GF+      D+   N N+ +  ++ 
Sbjct: 960  DGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVK 1019

Query: 981  AVLVAGLYPMVGRLLPPQKKGKRAVVETG-SGSRVLLHPHSL------------NFELSL 1040
            A LVAG+YP +  +       +  V+ TG    +V  HP S+            N + + 
Sbjct: 1020 AALVAGMYPNLVHV------DRENVILTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAA 1079

Query: 1041 KQTDSHPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNN 1093
             Q      ++YDE+TR     +IR C+ V P+ +L     +   PA+ + N         
Sbjct: 1080 IQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVL-----VFCGPARLASN--------- 1139

[Close]

BLAST of PI0021968 vs. ExPASy TrEMBL
Match: A0A1S3BTJ2 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493002 PE=4 SV=1)

HSP 1 Score: 2342.0 bits (6068), Expect = 0.0e+00
Identity = 1207/1289 (93.64%), Postives = 1226/1289 (95.11%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNV-GCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCR 60
            MAKKKQKKGEQKPKSKPI NV G AITQ L+RFCLTNDEVFTFEADLSKRERA VH+VCR
Sbjct: 1    MAKKKQKKGEQKPKSKPIPNVLGSAITQTLQRFCLTNDEVFTFEADLSKRERAFVHDVCR 60

Query: 61   KMGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN 120
            KMGM SKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN
Sbjct: 61   KMGMKSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN 120

Query: 121  HNKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVI 180
            HN KADKQRRKKDDIFWRPS  KEELMKKLGSYTMKSVANMKKI+EERSKLPIASF+DVI
Sbjct: 121  HNIKADKQRRKKDDIFWRPSTTKEELMKKLGSYTMKSVANMKKISEERSKLPIASFQDVI 180

Query: 181  TSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY 240
            TSTVESHQVVLI GETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY
Sbjct: 181  TSTVESHQVVLICGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY 240

Query: 241  ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVS 300
            ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKS KNV S
Sbjct: 241  ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSWKNVAS 300

Query: 301  DLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINV 360
            DLTHIIVDEVHERDRYSDFILTILRDLLPSYP LRLILMSATIDAERFSKYFGGCPIINV
Sbjct: 301  DLTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIINV 360

Query: 361  PGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNG 420
            PGFTYPVK+FYLED+LSI+KSSEENHLDD+ VGVSD EPELTEED LALDESI+MAWLN 
Sbjct: 361  PGFTYPVKSFYLEDILSILKSSEENHLDDT-VGVSDGEPELTEEDILALDESIEMAWLND 420

Query: 421  EFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT 480
            EFDPLLE VASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT
Sbjct: 421  EFDPLLEFVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT 480

Query: 481  TALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKIC 540
            TALELAERGDQKETAEAIRKHLE S SNSKEERRLIGAYLAKNSNSVDVRL+EQLLGKIC
Sbjct: 481  TALELAERGDQKETAEAIRKHLETSTSNSKEERRLIGAYLAKNSNSVDVRLLEQLLGKIC 540

Query: 541  LDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPP 600
            LDSKEGAILVFLPGWDDISKTRERLS+NPLFKDASKFLII LHSMVPSKEQKKVFRRPPP
Sbjct: 541  LDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPP 600

Query: 601  GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGR 660
            GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSN+STFQSSWISKASAKQREGR
Sbjct: 601  GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNISTFQSSWISKASAKQREGR 660

Query: 661  AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDP 720
            AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIE FLQKTLDP
Sbjct: 661  AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEGFLQKTLDP 720

Query: 721  PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL 780
            PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL
Sbjct: 721  PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL 780

Query: 781  ACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVR 840
            ACA DYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRG + R
Sbjct: 781  ACALDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRG-QAR 840

Query: 841  FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPM 900
            FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILH VLVAGLYP 
Sbjct: 841  FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHTVLVAGLYPK 900

Query: 901  VGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHI 960
            VGRLLPPQK+GKRAVVET SGSRVLLH HSLNFELSLKQTD+HPLIVYDE+TRGDGGTHI
Sbjct: 901  VGRLLPPQKRGKRAVVETCSGSRVLLHRHSLNFELSLKQTDNHPLIVYDEVTRGDGGTHI 960

Query: 961  RNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSN 1020
            RNCTVVGPLPLLMVAKDIAVAPAK SDNCKGGTENNNNGN EAGIDETAQEKMDIEN SN
Sbjct: 961  RNCTVVGPLPLLMVAKDIAVAPAKMSDNCKGGTENNNNGNDEAGIDETAQEKMDIENKSN 1020

Query: 1021 QQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV 1080
            QQPEEMIMSSPDN+VTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV
Sbjct: 1021 QQPEEMIMSSPDNAVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV 1080

Query: 1081 LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHP 1140
            LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIG FAPG+SVGTHKKVSWFHK HP
Sbjct: 1081 LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGQFAPGKSVGTHKKVSWFHKLHP 1140

Query: 1141 NYNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQR 1200
            NYNDF+VPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPY RASPNS YARS PQSQR
Sbjct: 1141 NYNDFSVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYVRASPNSAYARSAPQSQR 1200

Query: 1201 E------------QDAAQ-----------QQQQQQHAQEHNTRKQRKSHKERMAAKQQKP 1260
            E            QDAAQ           QQQQQQHAQEHNTRKQR SHKERMAAKQQKP
Sbjct: 1201 EHKPFKLGKPSRDQDAAQQQQQEQQEQQEQQQQQQHAQEHNTRKQRNSHKERMAAKQQKP 1260

Query: 1261 PSGGLSLNGYGLNTYGPYGPRGISLKRPR 1266
            PSG LSLNGYGLNTYGPYG RGISLKRPR
Sbjct: 1261 PSGDLSLNGYGLNTYGPYGHRGISLKRPR 1287

[Close]

BLAST of PI0021968 vs. ExPASy TrEMBL
Match: A0A0A0L085 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G063450 PE=4 SV=1)

HSP 1 Score: 2270.4 bits (5882), Expect = 0.0e+00
Identity = 1153/1200 (96.08%), Postives = 1173/1200 (97.75%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            M KKKQKKG QKPK K  SNVG AITQAL+RFCLT+DEVFTFEADLSKRERALVHEVCRK
Sbjct: 1    MTKKKQKKGVQKPKCKLNSNVGSAITQALQRFCLTHDEVFTFEADLSKRERALVHEVCRK 60

Query: 61   MGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNH 120
            MGMTSKSSGHGDQRRVSVYKSKLQMET+KFSEKTKTVLDDLFSMYPPDDGELGKETVGNH
Sbjct: 61   MGMTSKSSGHGDQRRVSVYKSKLQMETVKFSEKTKTVLDDLFSMYPPDDGELGKETVGNH 120

Query: 121  NKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVIT 180
            +KKADK RR+KDDIFWRPSM KEEL KK+GSYT+K+VANMKKI+ ERSKLPIASF DVIT
Sbjct: 121  HKKADKPRRRKDDIFWRPSMTKEELTKKVGSYTLKNVANMKKIS-ERSKLPIASFEDVIT 180

Query: 181  STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE 240
            STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE
Sbjct: 181  STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE 240

Query: 241  RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD 300
            RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD
Sbjct: 241  RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD 300

Query: 301  LTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVP 360
            LTHIIVDEVHERDRYSDFILTILRDLLPSYP LRLILMSATIDAERFSKYFGGCPII+VP
Sbjct: 301  LTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIISVP 360

Query: 361  GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNGE 420
            GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSD EPELTEEDKL LDESIDMAWLN E
Sbjct: 361  GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDGEPELTEEDKLDLDESIDMAWLNDE 420

Query: 421  FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTT 480
            FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGA CELQAKDG+T
Sbjct: 421  FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGATCELQAKDGST 480

Query: 481  ALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL 540
            ALELAERGDQKETAEAIRKHLE+SMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL
Sbjct: 481  ALELAERGDQKETAEAIRKHLESSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL 540

Query: 541  DSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPG 600
            DSKEGAILVFLPGWDDISKTRERLS+NPLFKDASKFLII LHSMVPSKEQKKVFRRPPPG
Sbjct: 541  DSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPPG 600

Query: 601  CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA 660
            CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA
Sbjct: 601  CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA 660

Query: 661  GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP 720
            GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP
Sbjct: 661  GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP 720

Query: 721  VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLA 780
            VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCL PALTLA
Sbjct: 721  VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLGPALTLA 780

Query: 781  CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVRF 840
            CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKN KGRG+EVRF
Sbjct: 781  CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNVKGRGQEVRF 840

Query: 841  CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV 900
            CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV
Sbjct: 841  CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV 900

Query: 901  GRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHIR 960
            GRLLPPQKKGKRAVVETGSGSRVLLHP SLNFELSLKQTDSHPLIVYDE+TRGDGGTHIR
Sbjct: 901  GRLLPPQKKGKRAVVETGSGSRVLLHPQSLNFELSLKQTDSHPLIVYDEVTRGDGGTHIR 960

Query: 961  NCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSNQ 1020
            NCT+VGPLPLLMVAKDIAVAPAKES+N KGGT+N N GNG+AGIDETAQEKMDIEN SNQ
Sbjct: 961  NCTIVGPLPLLMVAKDIAVAPAKESNNRKGGTKNKNKGNGKAGIDETAQEKMDIENKSNQ 1020

Query: 1021 QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL 1080
            QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL
Sbjct: 1021 QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL 1080

Query: 1081 GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHPN 1140
            GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRS+GTHKKVSWFHK HPN
Sbjct: 1081 GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSIGTHKKVSWFHKLHPN 1140

Query: 1141 YNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQRE 1200
            YNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPY R SPNSVYARSTPQSQRE
Sbjct: 1141 YNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYVRTSPNSVYARSTPQSQRE 1199

[Close]

BLAST of PI0021968 vs. ExPASy TrEMBL
Match: A0A1S3BRU6 (DExH-box ATP-dependent RNA helicase DExH6 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493002 PE=4 SV=1)

HSP 1 Score: 2263.4 bits (5864), Expect = 0.0e+00
Identity = 1178/1289 (91.39%), Postives = 1196/1289 (92.79%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNV-GCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCR 60
            MAKKKQKKGEQKPKSKPI NV G AITQ L+RFCLTNDEVFTFEADLSKRERA VH+VCR
Sbjct: 1    MAKKKQKKGEQKPKSKPIPNVLGSAITQTLQRFCLTNDEVFTFEADLSKRERAFVHDVCR 60

Query: 61   KMGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN 120
            KMGM SKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN
Sbjct: 61   KMGMKSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN 120

Query: 121  HNKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVI 180
            HN KADKQRRKKDDIFWRPS  KEELMKKLGSYTMKSVANMKKI+EERSKLPIASF+DVI
Sbjct: 121  HNIKADKQRRKKDDIFWRPSTTKEELMKKLGSYTMKSVANMKKISEERSKLPIASFQDVI 180

Query: 181  TSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY 240
            TSTVESHQVVLI GETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY
Sbjct: 181  TSTVESHQVVLICGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY 240

Query: 241  ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVS 300
            ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKS KNV S
Sbjct: 241  ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSWKNVAS 300

Query: 301  DLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINV 360
            DLTHIIVDEVHERDRYSDFILTILRDLLPSYP LRLILMSATIDAERFSKYFGGCPIINV
Sbjct: 301  DLTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIINV 360

Query: 361  PGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNG 420
            PGFTYPVK+FYLED+LSI+KSSEENHLDD+ VGVSD EPELTEED LALDESI+MAWLN 
Sbjct: 361  PGFTYPVKSFYLEDILSILKSSEENHLDDT-VGVSDGEPELTEEDILALDESIEMAWLND 420

Query: 421  EFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT 480
            EFDPLLE VASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT
Sbjct: 421  EFDPLLEFVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT 480

Query: 481  TALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKIC 540
            TALELAERGDQKETAEAIRKHLE S SNSKEERRLIGAYLAKNSNSVDVRL+EQLLGKIC
Sbjct: 481  TALELAERGDQKETAEAIRKHLETSTSNSKEERRLIGAYLAKNSNSVDVRLLEQLLGKIC 540

Query: 541  LDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPP 600
            LDSKEGAILVFLPGWDDISKTRERLS+NPLFKDASKFLII LHSMVPSKEQKKVFRRPPP
Sbjct: 541  LDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPP 600

Query: 601  GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGR 660
            GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSN+STFQSSWISKASAKQREGR
Sbjct: 601  GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNISTFQSSWISKASAKQREGR 660

Query: 661  AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDP 720
            AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIE FLQKTLDP
Sbjct: 661  AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEGFLQKTLDP 720

Query: 721  PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL 780
            PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL
Sbjct: 721  PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL 780

Query: 781  ACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVR 840
            ACA DYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRG + R
Sbjct: 781  ACALDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRG-QAR 840

Query: 841  FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPM 900
            FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILH VLVAGLYP 
Sbjct: 841  FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHTVLVAGLYPK 900

Query: 901  VGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHI 960
            VGRLLPPQK+GKRAVVET SGSRVLLH HSLNFELSLKQTD+HPLIVYDE+TRGDGGTHI
Sbjct: 901  VGRLLPPQKRGKRAVVETCSGSRVLLHRHSLNFELSLKQTDNHPLIVYDEVTRGDGGTHI 960

Query: 961  RNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSN 1020
            RNCTVVGPLPLLMVAKDIAVAPAK SDNCKGGTENNNNGN EAGIDETAQEKMDIEN SN
Sbjct: 961  RNCTVVGPLPLLMVAKDIAVAPAKMSDNCKGGTENNNNGNDEAGIDETAQEKMDIENKSN 1020

Query: 1021 QQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV 1080
            QQPEEMIMSSPDN+VTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV
Sbjct: 1021 QQPEEMIMSSPDNAVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV 1080

Query: 1081 LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHP 1140
            LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIG FAPG+SVGTHKK         
Sbjct: 1081 LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGQFAPGKSVGTHKK--------- 1140

Query: 1141 NYNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQR 1200
                                  NLLPTPDFRTANPSDPSSPY RASPNS YARS PQSQR
Sbjct: 1141 ----------------------NLLPTPDFRTANPSDPSSPYVRASPNSAYARSAPQSQR 1200

Query: 1201 E------------QDAAQ-----------QQQQQQHAQEHNTRKQRKSHKERMAAKQQKP 1260
            E            QDAAQ           QQQQQQHAQEHNTRKQR SHKERMAAKQQKP
Sbjct: 1201 EHKPFKLGKPSRDQDAAQQQQQEQQEQQEQQQQQQHAQEHNTRKQRNSHKERMAAKQQKP 1256

Query: 1261 PSGGLSLNGYGLNTYGPYGPRGISLKRPR 1266
            PSG LSLNGYGLNTYGPYG RGISLKRPR
Sbjct: 1261 PSGDLSLNGYGLNTYGPYGHRGISLKRPR 1256

[Close]

BLAST of PI0021968 vs. ExPASy TrEMBL
Match: A0A1S3BSG9 (DExH-box ATP-dependent RNA helicase DExH6 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103493002 PE=4 SV=1)

HSP 1 Score: 2198.7 bits (5696), Expect = 0.0e+00
Identity = 1130/1204 (93.85%), Postives = 1147/1204 (95.27%), Query Frame = 0


Query: 85   METMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNHNKKADKQRRKKDDIFWRPSMNKEE 144
            METMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNHN KADKQRRKKDDIFWRPS  KEE
Sbjct: 1    METMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNHNIKADKQRRKKDDIFWRPSTTKEE 60

Query: 145  LMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVP 204
            LMKKLGSYTMKSVANMKKI+EERSKLPIASF+DVITSTVESHQVVLI GETGCGKTTQVP
Sbjct: 61   LMKKLGSYTMKSVANMKKISEERSKLPIASFQDVITSTVESHQVVLICGETGCGKTTQVP 120

Query: 205  QFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSS 264
            QFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSS
Sbjct: 121  QFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSS 180

Query: 265  IVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILR 324
            IVLCTNGILLRVLISEGLGKLTMEASRKS KNV SDLTHIIVDEVHERDRYSDFILTILR
Sbjct: 181  IVLCTNGILLRVLISEGLGKLTMEASRKSWKNVASDLTHIIVDEVHERDRYSDFILTILR 240

Query: 325  DLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVPGFTYPVKNFYLEDVLSIVKSSEEN 384
            DLLPSYP LRLILMSATIDAERFSKYFGGCPIINVPGFTYPVK+FYLED+LSI+KSSEEN
Sbjct: 241  DLLPSYPHLRLILMSATIDAERFSKYFGGCPIINVPGFTYPVKSFYLEDILSILKSSEEN 300

Query: 385  HLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNGEFDPLLELVASGGSSQIFNYQHSVT 444
            HLDD+ VGVSD EPELTEED LALDESI+MAWLN EFDPLLE VASGGSSQIFNYQHSVT
Sbjct: 301  HLDDT-VGVSDGEPELTEEDILALDESIEMAWLNDEFDPLLEFVASGGSSQIFNYQHSVT 360

Query: 445  GLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEAIRKHLENS 504
            GLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEAIRKHLE S
Sbjct: 361  GLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEAIRKHLETS 420

Query: 505  MSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERL 564
             SNSKEERRLIGAYLAKNSNSVDVRL+EQLLGKICLDSKEGAILVFLPGWDDISKTRERL
Sbjct: 421  TSNSKEERRLIGAYLAKNSNSVDVRLLEQLLGKICLDSKEGAILVFLPGWDDISKTRERL 480

Query: 565  SVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVI 624
            S+NPLFKDASKFLII LHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVI
Sbjct: 481  SINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVI 540

Query: 625  DSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQ 684
            DSGWMKEKSYDPYSN+STFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQ
Sbjct: 541  DSGWMKEKSYDPYSNISTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQ 600

Query: 685  VPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKL 744
            VPEIKRMPIEELCLQVKLLDPNCKIE FLQKTLDPPVFDTIRNAILVLQDIGALSLDEKL
Sbjct: 601  VPEIKRMPIEELCLQVKLLDPNCKIEGFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKL 660

Query: 745  TELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAA 804
            TELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLACA DYKDPFTLPMLPSERKKAAAA
Sbjct: 661  TELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLACALDYKDPFTLPMLPSERKKAAAA 720

Query: 805  KAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVRFCSKYYISSSTMTMLSGMRRQLEME 864
            KAELASLYGGHSDQLAVVAAFDCWKNAKGRG + RFCSKYYISSSTMTMLSGMRRQLEME
Sbjct: 721  KAELASLYGGHSDQLAVVAAFDCWKNAKGRG-QARFCSKYYISSSTMTMLSGMRRQLEME 780

Query: 865  LVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVL 924
            LVQNGFIPEDVSTCNLNACDPGILH VLVAGLYP VGRLLPPQK+GKRAVVET SGSRVL
Sbjct: 781  LVQNGFIPEDVSTCNLNACDPGILHTVLVAGLYPKVGRLLPPQKRGKRAVVETCSGSRVL 840

Query: 925  LHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKE 984
            LH HSLNFELSLKQTD+HPLIVYDE+TRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAK 
Sbjct: 841  LHRHSLNFELSLKQTDNHPLIVYDEVTRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKM 900

Query: 985  SDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSNQQPEEMIMSSPDNSVTVVVDRWLQF 1044
            SDNCKGGTENNNNGN EAGIDETAQEKMDIEN SNQQPEEMIMSSPDN+VTVVVDRWLQF
Sbjct: 901  SDNCKGGTENNNNGNDEAGIDETAQEKMDIENKSNQQPEEMIMSSPDNAVTVVVDRWLQF 960

Query: 1045 WSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLESV 1104
            WSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLESV
Sbjct: 961  WSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLESV 1020

Query: 1105 EMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHPNYNDFTVPEANGTSILNDPLSQNLL 1164
            EMLTSMVNATEIG FAPG+SVGTHKKVSWFHK HPNYNDF+VPEANGTSILNDPLSQNLL
Sbjct: 1021 EMLTSMVNATEIGQFAPGKSVGTHKKVSWFHKLHPNYNDFSVPEANGTSILNDPLSQNLL 1080

Query: 1165 PTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQRE------------QDAAQ------- 1224
            PTPDFRTANPSDPSSPY RASPNS YARS PQSQRE            QDAAQ       
Sbjct: 1081 PTPDFRTANPSDPSSPYVRASPNSAYARSAPQSQREHKPFKLGKPSRDQDAAQQQQQEQQ 1140

Query: 1225 ----QQQQQQHAQEHNTRKQRKSHKERMAAKQQKPPSGGLSLNGYGLNTYGPYGPRGISL 1266
                QQQQQQHAQEHNTRKQR SHKERMAAKQQKPPSG LSLNGYGLNTYGPYG RGISL
Sbjct: 1141 EQQEQQQQQQHAQEHNTRKQRNSHKERMAAKQQKPPSGDLSLNGYGLNTYGPYGHRGISL 1200

[Close]

BLAST of PI0021968 vs. ExPASy TrEMBL
Match: A0A6J1FT07 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447032 PE=4 SV=1)

HSP 1 Score: 2153.6 bits (5579), Expect = 0.0e+00
Identity = 1114/1286 (86.63%), Postives = 1176/1286 (91.45%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            MAKKKQKKGEQKPK K  +     IT+ALERFCL+NDEVFTFEADLSKRERALVHE CRK
Sbjct: 1    MAKKKQKKGEQKPKPKAFAVADSEITRALERFCLSNDEVFTFEADLSKRERALVHEECRK 60

Query: 61   MGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNH 120
            MG+TSKS G GDQRRVS+YKSK Q +TMKFSEKTK+VLDDLFS YPPDDGELG+ET+G  
Sbjct: 61   MGLTSKSYGRGDQRRVSIYKSKPQKDTMKFSEKTKSVLDDLFSSYPPDDGELGRETIGKC 120

Query: 121  NKKADKQRRKKDDIFWRPSMNKEELMKKLGSYT--MKSVANMKKIAEERSKLPIASFRDV 180
             KK  KQ RKKDDIFWRPSMNKEE+MKK+ SYT  +KSVAN+KKI+ +RSKLPIASF+DV
Sbjct: 121  KKKTHKQSRKKDDIFWRPSMNKEEIMKKVESYTTRVKSVANLKKISGDRSKLPIASFQDV 180

Query: 181  ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERIS 240
            ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGE CKI+CTQPRRISA SVSERIS
Sbjct: 181  ITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGEACKIICTQPRRISATSVSERIS 240

Query: 241  YERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVV 300
            YERGENVGSD+GYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLT EAS KSRKNVV
Sbjct: 241  YERGENVGSDVGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTTEASEKSRKNVV 300

Query: 301  SDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIIN 360
            SDLTHIIVDEVHERDRYSDFIL ILRDLLP+YP LRLILMSATIDAERFSKYFGGCPII+
Sbjct: 301  SDLTHIIVDEVHERDRYSDFILAILRDLLPTYPHLRLILMSATIDAERFSKYFGGCPIIS 360

Query: 361  VPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLN 420
            VPGFT+PVKNFYLEDVLSIVKSSEENHLDDS VG SDEE ELTEEDKL+LDE+I +AWLN
Sbjct: 361  VPGFTFPVKNFYLEDVLSIVKSSEENHLDDSTVGASDEETELTEEDKLSLDEAIHLAWLN 420

Query: 421  GEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
             EFDPLLELVAS GSSQIFNYQHSVTGL+PLMVLAGKGRVSDVCMLLSFGAMCELQAKDG
Sbjct: 421  DEFDPLLELVASEGSSQIFNYQHSVTGLSPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480

Query: 481  TTALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKI 540
             TALE+AERG+ KETAEAIRKHLE+SMSNSKEE+RLIG YLA+NSNSVDV LI+ LLGKI
Sbjct: 481  MTALEMAERGEHKETAEAIRKHLESSMSNSKEEQRLIGKYLARNSNSVDVALIDLLLGKI 540

Query: 541  CLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPP 600
            CLDSKEGAILVFLPGWDDISKTRERLS+NP+FKDASKFLII LHSMVPSKEQKKVF+RPP
Sbjct: 541  CLDSKEGAILVFLPGWDDISKTRERLSINPIFKDASKFLIISLHSMVPSKEQKKVFKRPP 600

Query: 601  PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
            PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601  PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660

Query: 661  RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLD 720
            RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNC+IEDFLQKTLD
Sbjct: 661  RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCRIEDFLQKTLD 720

Query: 721  PPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALT 780
            PPVFDTIRNAILVLQDIGALSLDEKLTELG+KLGSLPVHPVTSKMLIFAILMNCL+PALT
Sbjct: 721  PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLEPALT 780

Query: 781  LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEV 840
            LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAK RG+E 
Sbjct: 781  LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKRRGQEA 840

Query: 841  RFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYP 900
            RFCSKY+IS STM+ML GMRRQLEMELVQNGFIPED+STC+LNA DPGILHAVLVAGLYP
Sbjct: 841  RFCSKYHISPSTMSMLFGMRRQLEMELVQNGFIPEDISTCSLNARDPGILHAVLVAGLYP 900

Query: 901  MVGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTH 960
            MVGRLLPPQKKGKRAVVETGSG RVLLH  SLNFELS K TD+ PLIVYDEITRGDGGTH
Sbjct: 901  MVGRLLPPQKKGKRAVVETGSGGRVLLHRQSLNFELSHKLTDNCPLIVYDEITRGDGGTH 960

Query: 961  IRNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNS 1020
            IRNCTVVGPLPLLMVAK+IAVAPAKE+DN KG   N+  GN EAG+ ET ++KMDIEN S
Sbjct: 961  IRNCTVVGPLPLLMVAKEIAVAPAKENDNGKGDIVNDTYGNDEAGVVETVEDKMDIENKS 1020

Query: 1021 NQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPP 1080
            N+QPEEMIMSSPDNSVTVVVDRWL FWSKALDIAQLYCLRERLS+AILFKVKHPN +LPP
Sbjct: 1021 NEQPEEMIMSSPDNSVTVVVDRWLYFWSKALDIAQLYCLRERLSAAILFKVKHPNKILPP 1080

Query: 1081 VLGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSH 1140
            VLGASMHALACILSYDGL+GISLESVEMLT+MV+ATEI +F PGRS  THKKVS FH+S 
Sbjct: 1081 VLGASMHALACILSYDGLTGISLESVEMLTTMVDATEISNFVPGRSNETHKKVSSFHRSL 1140

Query: 1141 PNYNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQ 1200
             NYNDFTVPE++GTS LN P SQN LP PDFR ANPSDPSSP FRA PNSVYARST Q  
Sbjct: 1141 SNYNDFTVPESSGTSNLNHPFSQNFLPPPDFRAANPSDPSSPNFRAFPNSVYARSTLQPH 1200

Query: 1201 REQDAAQ-----QQQ---QQQHAQEHNTRKQRKSHKERMAAKQ------QKPPSGGLSLN 1260
            R Q   Q     Q Q   QQQHA EH TRKQRKS +ER AA+Q      QKPPSG  SLN
Sbjct: 1201 RGQKHPQPAKPFQDQNATQQQHAPEHKTRKQRKSRRERKAAQQQKHPQLQKPPSGEPSLN 1260

Query: 1261 GYGLNTYGPYGPRGISLKRPRGNGVG 1271
            GYGL+TYGPYG RGISLKRPRGNG G
Sbjct: 1261 GYGLSTYGPYGLRGISLKRPRGNGAG 1286

[Close]

BLAST of PI0021968 vs. NCBI nr
Match: XP_031740756.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucumis sativus])

HSP 1 Score: 2380.1 bits (6167), Expect = 0.0e+00
Identity = 1221/1286 (94.95%), Postives = 1241/1286 (96.50%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            M KKKQKKG QKPK K  SNVG AITQAL+RFCLT+DEVFTFEADLSKRERALVHEVCRK
Sbjct: 1    MTKKKQKKGVQKPKCKLNSNVGSAITQALQRFCLTHDEVFTFEADLSKRERALVHEVCRK 60

Query: 61   MGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNH 120
            MGMTSKSSGHGDQRRVSVYKSKLQMET+KFSEKTKTVLDDLFSMYPPDDGELGKETVGNH
Sbjct: 61   MGMTSKSSGHGDQRRVSVYKSKLQMETVKFSEKTKTVLDDLFSMYPPDDGELGKETVGNH 120

Query: 121  NKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVIT 180
            +KKADK RR+KDDIFWRPSM KEEL KK+GSYT+K+VANMKKI+ ERSKLPIASF DVIT
Sbjct: 121  HKKADKPRRRKDDIFWRPSMTKEELTKKVGSYTLKNVANMKKIS-ERSKLPIASFEDVIT 180

Query: 181  STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE 240
            STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE
Sbjct: 181  STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE 240

Query: 241  RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD 300
            RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD
Sbjct: 241  RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD 300

Query: 301  LTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVP 360
            LTHIIVDEVHERDRYSDFILTILRDLLPSYP LRLILMSATIDAERFSKYFGGCPII+VP
Sbjct: 301  LTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIISVP 360

Query: 361  GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNGE 420
            GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSD EPELTEEDKL LDESIDMAWLN E
Sbjct: 361  GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDGEPELTEEDKLDLDESIDMAWLNDE 420

Query: 421  FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTT 480
            FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGA CELQAKDG+T
Sbjct: 421  FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGATCELQAKDGST 480

Query: 481  ALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL 540
            ALELAERGDQKETAEAIRKHLE+SMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL
Sbjct: 481  ALELAERGDQKETAEAIRKHLESSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL 540

Query: 541  DSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPG 600
            DSKEGAILVFLPGWDDISKTRERLS+NPLFKDASKFLII LHSMVPSKEQKKVFRRPPPG
Sbjct: 541  DSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPPG 600

Query: 601  CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA 660
            CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA
Sbjct: 601  CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA 660

Query: 661  GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP 720
            GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP
Sbjct: 661  GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP 720

Query: 721  VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLA 780
            VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCL PALTLA
Sbjct: 721  VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLGPALTLA 780

Query: 781  CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVRF 840
            CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKN KGRG+EVRF
Sbjct: 781  CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNVKGRGQEVRF 840

Query: 841  CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV 900
            CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV
Sbjct: 841  CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV 900

Query: 901  GRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHIR 960
            GRLLPPQKKGKRAVVETGSGSRVLLHP SLNFELSLKQTDSHPLIVYDE+TRGDGGTHIR
Sbjct: 901  GRLLPPQKKGKRAVVETGSGSRVLLHPQSLNFELSLKQTDSHPLIVYDEVTRGDGGTHIR 960

Query: 961  NCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSNQ 1020
            NCT+VGPLPLLMVAKDIAVAPAKES+N KGGT+N N GNG+AGIDETAQEKMDIEN SNQ
Sbjct: 961  NCTIVGPLPLLMVAKDIAVAPAKESNNRKGGTKNKNKGNGKAGIDETAQEKMDIENKSNQ 1020

Query: 1021 QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL 1080
            QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL
Sbjct: 1021 QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL 1080

Query: 1081 GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHPN 1140
            GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRS+GTHKKVSWFHK HPN
Sbjct: 1081 GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSIGTHKKVSWFHKLHPN 1140

Query: 1141 YNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQRE 1200
            YNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPY R SPNSVYARSTPQSQRE
Sbjct: 1141 YNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYVRTSPNSVYARSTPQSQRE 1200

Query: 1201 ------------QDAA----QQQQQQQHAQEHNTRKQRKSHKERMAAKQQKPPSGGLSLN 1260
                        QDAA    QQQQQQQH QEHNTRKQRKSHKERMAAKQQKPPSG LSLN
Sbjct: 1201 HKPFKLGKLSRDQDAAQQQQQQQQQQQHVQEHNTRKQRKSHKERMAAKQQKPPSGDLSLN 1260

Query: 1261 GYGLNTYGPYGPRGISLKRPRGNGVG 1271
            GYGLNTYGPYGPRGISLKRPRGNGVG
Sbjct: 1261 GYGLNTYGPYGPRGISLKRPRGNGVG 1285

[Close]

BLAST of PI0021968 vs. NCBI nr
Match: XP_008451833.1 (PREDICTED: DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucumis melo])

HSP 1 Score: 2342.0 bits (6068), Expect = 0.0e+00
Identity = 1207/1289 (93.64%), Postives = 1226/1289 (95.11%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNV-GCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCR 60
            MAKKKQKKGEQKPKSKPI NV G AITQ L+RFCLTNDEVFTFEADLSKRERA VH+VCR
Sbjct: 1    MAKKKQKKGEQKPKSKPIPNVLGSAITQTLQRFCLTNDEVFTFEADLSKRERAFVHDVCR 60

Query: 61   KMGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN 120
            KMGM SKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN
Sbjct: 61   KMGMKSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN 120

Query: 121  HNKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVI 180
            HN KADKQRRKKDDIFWRPS  KEELMKKLGSYTMKSVANMKKI+EERSKLPIASF+DVI
Sbjct: 121  HNIKADKQRRKKDDIFWRPSTTKEELMKKLGSYTMKSVANMKKISEERSKLPIASFQDVI 180

Query: 181  TSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY 240
            TSTVESHQVVLI GETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY
Sbjct: 181  TSTVESHQVVLICGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY 240

Query: 241  ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVS 300
            ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKS KNV S
Sbjct: 241  ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSWKNVAS 300

Query: 301  DLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINV 360
            DLTHIIVDEVHERDRYSDFILTILRDLLPSYP LRLILMSATIDAERFSKYFGGCPIINV
Sbjct: 301  DLTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIINV 360

Query: 361  PGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNG 420
            PGFTYPVK+FYLED+LSI+KSSEENHLDD+ VGVSD EPELTEED LALDESI+MAWLN 
Sbjct: 361  PGFTYPVKSFYLEDILSILKSSEENHLDDT-VGVSDGEPELTEEDILALDESIEMAWLND 420

Query: 421  EFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT 480
            EFDPLLE VASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT
Sbjct: 421  EFDPLLEFVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT 480

Query: 481  TALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKIC 540
            TALELAERGDQKETAEAIRKHLE S SNSKEERRLIGAYLAKNSNSVDVRL+EQLLGKIC
Sbjct: 481  TALELAERGDQKETAEAIRKHLETSTSNSKEERRLIGAYLAKNSNSVDVRLLEQLLGKIC 540

Query: 541  LDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPP 600
            LDSKEGAILVFLPGWDDISKTRERLS+NPLFKDASKFLII LHSMVPSKEQKKVFRRPPP
Sbjct: 541  LDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPP 600

Query: 601  GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGR 660
            GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSN+STFQSSWISKASAKQREGR
Sbjct: 601  GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNISTFQSSWISKASAKQREGR 660

Query: 661  AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDP 720
            AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIE FLQKTLDP
Sbjct: 661  AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEGFLQKTLDP 720

Query: 721  PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL 780
            PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL
Sbjct: 721  PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL 780

Query: 781  ACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVR 840
            ACA DYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRG + R
Sbjct: 781  ACALDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRG-QAR 840

Query: 841  FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPM 900
            FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILH VLVAGLYP 
Sbjct: 841  FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHTVLVAGLYPK 900

Query: 901  VGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHI 960
            VGRLLPPQK+GKRAVVET SGSRVLLH HSLNFELSLKQTD+HPLIVYDE+TRGDGGTHI
Sbjct: 901  VGRLLPPQKRGKRAVVETCSGSRVLLHRHSLNFELSLKQTDNHPLIVYDEVTRGDGGTHI 960

Query: 961  RNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSN 1020
            RNCTVVGPLPLLMVAKDIAVAPAK SDNCKGGTENNNNGN EAGIDETAQEKMDIEN SN
Sbjct: 961  RNCTVVGPLPLLMVAKDIAVAPAKMSDNCKGGTENNNNGNDEAGIDETAQEKMDIENKSN 1020

Query: 1021 QQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV 1080
            QQPEEMIMSSPDN+VTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV
Sbjct: 1021 QQPEEMIMSSPDNAVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV 1080

Query: 1081 LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHP 1140
            LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIG FAPG+SVGTHKKVSWFHK HP
Sbjct: 1081 LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGQFAPGKSVGTHKKVSWFHKLHP 1140

Query: 1141 NYNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQR 1200
            NYNDF+VPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPY RASPNS YARS PQSQR
Sbjct: 1141 NYNDFSVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYVRASPNSAYARSAPQSQR 1200

Query: 1201 E------------QDAAQ-----------QQQQQQHAQEHNTRKQRKSHKERMAAKQQKP 1260
            E            QDAAQ           QQQQQQHAQEHNTRKQR SHKERMAAKQQKP
Sbjct: 1201 EHKPFKLGKPSRDQDAAQQQQQEQQEQQEQQQQQQHAQEHNTRKQRNSHKERMAAKQQKP 1260

Query: 1261 PSGGLSLNGYGLNTYGPYGPRGISLKRPR 1266
            PSG LSLNGYGLNTYGPYG RGISLKRPR
Sbjct: 1261 PSGDLSLNGYGLNTYGPYGHRGISLKRPR 1287

[Close]

BLAST of PI0021968 vs. NCBI nr
Match: XP_038906440.1 (DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Benincasa hispida])

HSP 1 Score: 2323.1 bits (6019), Expect = 0.0e+00
Identity = 1186/1280 (92.66%), Postives = 1225/1280 (95.70%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            MAKKKQKKGEQK KSKPI +VGCAITQALERFCL+NDEVFTFEADLSKRERALVHEVCRK
Sbjct: 1    MAKKKQKKGEQKLKSKPIPDVGCAITQALERFCLSNDEVFTFEADLSKRERALVHEVCRK 60

Query: 61   MGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNH 120
            MGM SKSSGHG+QRRVSVYKSK+QMETMKFSEKTKTVLDDLFSMYPPDDG+LGKET G H
Sbjct: 61   MGMASKSSGHGNQRRVSVYKSKMQMETMKFSEKTKTVLDDLFSMYPPDDGDLGKETAGKH 120

Query: 121  NKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVIT 180
            NKKADKQRRKKDDIFWRPSMNKEE+MKKLGSYTMKSVAN+KKI+EERSKLPIASF+DVIT
Sbjct: 121  NKKADKQRRKKDDIFWRPSMNKEEIMKKLGSYTMKSVANLKKISEERSKLPIASFQDVIT 180

Query: 181  STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE 240
            STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISA+SVSERISYE
Sbjct: 181  STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAISVSERISYE 240

Query: 241  RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSR--KNVV 300
            RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEAS KSR  KNVV
Sbjct: 241  RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASEKSRKNKNVV 300

Query: 301  SDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIIN 360
            SDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIIN
Sbjct: 301  SDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIIN 360

Query: 361  VPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLN 420
            VPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELT+EDKLALDE+IDMAWLN
Sbjct: 361  VPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTDEDKLALDEAIDMAWLN 420

Query: 421  GEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDG 480
             EFDPLLELVAS  SSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCEL+AKDG
Sbjct: 421  DEFDPLLELVASNRSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELRAKDG 480

Query: 481  TTALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKI 540
            TTALELAERGDQKETAEAIR HLE+SMSNSKEERRLIG YLAKNSNSVD+ LIEQLLGKI
Sbjct: 481  TTALELAERGDQKETAEAIRNHLESSMSNSKEERRLIGTYLAKNSNSVDIGLIEQLLGKI 540

Query: 541  CLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPP 600
            CLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLII LHSMVPSKEQKKVFRRPP
Sbjct: 541  CLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIISLHSMVPSKEQKKVFRRPP 600

Query: 601  PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660
            PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG
Sbjct: 601  PGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREG 660

Query: 661  RAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLD 720
            RAGRCQPGICYHLYSKF+A SLPDFQVPEIKRMP+EELCLQVKLLDPNC+IEDFLQKTLD
Sbjct: 661  RAGRCQPGICYHLYSKFQALSLPDFQVPEIKRMPMEELCLQVKLLDPNCRIEDFLQKTLD 720

Query: 721  PPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALT 780
            PPVFDTIRNAILVLQDIGALSLDEKLTELG+KLGSLPVHPVTSKMLIFAILMNCLDPALT
Sbjct: 721  PPVFDTIRNAILVLQDIGALSLDEKLTELGEKLGSLPVHPVTSKMLIFAILMNCLDPALT 780

Query: 781  LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEV 840
            LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAK RG+E 
Sbjct: 781  LACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKDRGQEA 840

Query: 841  RFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYP 900
            RFCSKYYIS STMTMLSGMRRQLEMELVQNGFIPEDVSTC++NACDPGILHAVLVAGLYP
Sbjct: 841  RFCSKYYISLSTMTMLSGMRRQLEMELVQNGFIPEDVSTCSVNACDPGILHAVLVAGLYP 900

Query: 901  MVGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTH 960
            MVGRLLPPQ+KGKRAVVETGSGSRVLLHP SLNFELSLKQTD+ PLIVYDEITRGDGGTH
Sbjct: 901  MVGRLLPPQRKGKRAVVETGSGSRVLLHPQSLNFELSLKQTDNRPLIVYDEITRGDGGTH 960

Query: 961  IRNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNS 1020
            IRNCTVVGPLP+LMVAK+IAVAPA+E+DNCK G EN++NGN EAGI ET +EKMDIEN S
Sbjct: 961  IRNCTVVGPLPILMVAKEIAVAPAQENDNCKDGIENDDNGNDEAGIVETVEEKMDIENKS 1020

Query: 1021 NQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPP 1080
            NQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLP 
Sbjct: 1021 NQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPS 1080

Query: 1081 VLGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSH 1140
            VL ASMHAL+CILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRS+G+HKKVSWF KSH
Sbjct: 1081 VLNASMHALSCILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSIGSHKKVSWFLKSH 1140

Query: 1141 PNYNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQ 1200
             NYN+FTVPEANGTSILNDPLSQNLLP PDFR  NPSD S+P FRASPNSVYARSTPQS 
Sbjct: 1141 SNYNEFTVPEANGTSILNDPLSQNLLPPPDFRKGNPSDQSTPNFRASPNSVYARSTPQSH 1200

Query: 1201 REQ--------DAAQQQQQQQHAQEHNTRKQRKSHKERMAAKQQKPPSGGLSLNGYGLNT 1260
            RE            Q   +QQHAQE+NTRKQRK HKE MAAKQQKPPSG LSLNGYGLN+
Sbjct: 1201 REHKPFKPGKPSRDQSATEQQHAQENNTRKQRKPHKEHMAAKQQKPPSGDLSLNGYGLNS 1260

Query: 1261 YGPYGPRGISLKRPRGNGVG 1271
            YGPYGPRGISLKRPRGNGVG
Sbjct: 1261 YGPYGPRGISLKRPRGNGVG 1280

[Close]

BLAST of PI0021968 vs. NCBI nr
Match: KGN53521.2 (hypothetical protein Csa_014615 [Cucumis sativus])

HSP 1 Score: 2299.6 bits (5958), Expect = 0.0e+00
Identity = 1191/1286 (92.61%), Postives = 1211/1286 (94.17%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            M KKKQKKG QKPK K  SNVG AITQAL+RFCLT+DEVFTFEADLSKRERALVHEVCRK
Sbjct: 1    MTKKKQKKGVQKPKCKLNSNVGSAITQALQRFCLTHDEVFTFEADLSKRERALVHEVCRK 60

Query: 61   MGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGNH 120
            MGMTSKSSGHGDQRRVSVYKSKLQMET+KFSEKTKTVLDDLFSMYPPDDGELGKETVGNH
Sbjct: 61   MGMTSKSSGHGDQRRVSVYKSKLQMETVKFSEKTKTVLDDLFSMYPPDDGELGKETVGNH 120

Query: 121  NKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVIT 180
            +KKADK RR+KDDIFWRPSM KEEL KK+GSYT+K+VANMKKI+ ERSKLPIASF DVIT
Sbjct: 121  HKKADKPRRRKDDIFWRPSMTKEELTKKVGSYTLKNVANMKKIS-ERSKLPIASFEDVIT 180

Query: 181  STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE 240
            STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE
Sbjct: 181  STVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISYE 240

Query: 241  RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD 300
            RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD
Sbjct: 241  RGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSD 300

Query: 301  LTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVP 360
            LTHIIVDEVHERDRYSDFILTILRDLLPSYP LRLILMSATIDAERFSKYFGGCPII+VP
Sbjct: 301  LTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIISVP 360

Query: 361  GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNGE 420
            GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSD EPELTEEDKL LDESIDMAWLN E
Sbjct: 361  GFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDGEPELTEEDKLDLDESIDMAWLNDE 420

Query: 421  FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTT 480
            FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGA CELQAKDG+T
Sbjct: 421  FDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGATCELQAKDGST 480

Query: 481  ALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL 540
            ALELAERGDQKETAEAIRKHLE+SMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL
Sbjct: 481  ALELAERGDQKETAEAIRKHLESSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKICL 540

Query: 541  DSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPG 600
            DSKEGAILVFLPGWDDISKTRERLS+NPLFKDASKFLII LHSMVPSKEQKKVFRRPPPG
Sbjct: 541  DSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPPG 600

Query: 601  CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA 660
            CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA
Sbjct: 601  CRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRA 660

Query: 661  GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP 720
            GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP
Sbjct: 661  GRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPP 720

Query: 721  VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLA 780
            VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCL PALTLA
Sbjct: 721  VFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLGPALTLA 780

Query: 781  CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVRF 840
            CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKN KGRG+EVRF
Sbjct: 781  CASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNVKGRGQEVRF 840

Query: 841  CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV 900
            CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV
Sbjct: 841  CSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMV 900

Query: 901  GRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHIR 960
            GRLLPPQKKGKRAVVETGSGSRVLLHP SLNFELSLKQTDSHPLIVYDE+TRGDGGTHIR
Sbjct: 901  GRLLPPQKKGKRAVVETGSGSRVLLHPQSLNFELSLKQTDSHPLIVYDEVTRGDGGTHIR 960

Query: 961  NCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSNQ 1020
            NCT+VGPLPLLMVAKDIAVAPAKES+N KGGT+N N GNG+AGIDETAQEKMDIEN SNQ
Sbjct: 961  NCTIVGPLPLLMVAKDIAVAPAKESNNRKGGTKNKNKGNGKAGIDETAQEKMDIENKSNQ 1020

Query: 1021 QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL 1080
            QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL
Sbjct: 1021 QPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVL 1080

Query: 1081 GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHPN 1140
            GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRS+GTHKK          
Sbjct: 1081 GASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSIGTHKK---------- 1140

Query: 1141 YNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQRE 1200
                                 NLLPTPDFRTANPSDPSSPY R SPNSVYARSTPQSQRE
Sbjct: 1141 ---------------------NLLPTPDFRTANPSDPSSPYVRTSPNSVYARSTPQSQRE 1200

Query: 1201 ------------QDAA----QQQQQQQHAQEHNTRKQRKSHKERMAAKQQKPPSGGLSLN 1260
                        QDAA    QQQQQQQH QEHNTRKQRKSHKERMAAKQQKPPSG LSLN
Sbjct: 1201 HKPFKLGKLSRDQDAAQQQQQQQQQQQHVQEHNTRKQRKSHKERMAAKQQKPPSGDLSLN 1254

Query: 1261 GYGLNTYGPYGPRGISLKRPRGNGVG 1271
            GYGLNTYGPYGPRGISLKRPRGNGVG
Sbjct: 1261 GYGLNTYGPYGPRGISLKRPRGNGVG 1254

[Close]

BLAST of PI0021968 vs. NCBI nr
Match: XP_008451834.1 (PREDICTED: DExH-box ATP-dependent RNA helicase DExH6 isoform X2 [Cucumis melo])

HSP 1 Score: 2263.4 bits (5864), Expect = 0.0e+00
Identity = 1178/1289 (91.39%), Postives = 1196/1289 (92.79%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNV-GCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCR 60
            MAKKKQKKGEQKPKSKPI NV G AITQ L+RFCLTNDEVFTFEADLSKRERA VH+VCR
Sbjct: 1    MAKKKQKKGEQKPKSKPIPNVLGSAITQTLQRFCLTNDEVFTFEADLSKRERAFVHDVCR 60

Query: 61   KMGMTSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN 120
            KMGM SKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN
Sbjct: 61   KMGMKSKSSGHGDQRRVSVYKSKLQMETMKFSEKTKTVLDDLFSMYPPDDGELGKETVGN 120

Query: 121  HNKKADKQRRKKDDIFWRPSMNKEELMKKLGSYTMKSVANMKKIAEERSKLPIASFRDVI 180
            HN KADKQRRKKDDIFWRPS  KEELMKKLGSYTMKSVANMKKI+EERSKLPIASF+DVI
Sbjct: 121  HNIKADKQRRKKDDIFWRPSTTKEELMKKLGSYTMKSVANMKKISEERSKLPIASFQDVI 180

Query: 181  TSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY 240
            TSTVESHQVVLI GETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY
Sbjct: 181  TSTVESHQVVLICGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQPRRISAVSVSERISY 240

Query: 241  ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVS 300
            ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKS KNV S
Sbjct: 241  ERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSWKNVAS 300

Query: 301  DLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINV 360
            DLTHIIVDEVHERDRYSDFILTILRDLLPSYP LRLILMSATIDAERFSKYFGGCPIINV
Sbjct: 301  DLTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATIDAERFSKYFGGCPIINV 360

Query: 361  PGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNG 420
            PGFTYPVK+FYLED+LSI+KSSEENHLDD+ VGVSD EPELTEED LALDESI+MAWLN 
Sbjct: 361  PGFTYPVKSFYLEDILSILKSSEENHLDDT-VGVSDGEPELTEEDILALDESIEMAWLND 420

Query: 421  EFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT 480
            EFDPLLE VASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT
Sbjct: 421  EFDPLLEFVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGT 480

Query: 481  TALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAKNSNSVDVRLIEQLLGKIC 540
            TALELAERGDQKETAEAIRKHLE S SNSKEERRLIGAYLAKNSNSVDVRL+EQLLGKIC
Sbjct: 481  TALELAERGDQKETAEAIRKHLETSTSNSKEERRLIGAYLAKNSNSVDVRLLEQLLGKIC 540

Query: 541  LDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPP 600
            LDSKEGAILVFLPGWDDISKTRERLS+NPLFKDASKFLII LHSMVPSKEQKKVFRRPPP
Sbjct: 541  LDSKEGAILVFLPGWDDISKTRERLSINPLFKDASKFLIISLHSMVPSKEQKKVFRRPPP 600

Query: 601  GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGR 660
            GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSN+STFQSSWISKASAKQREGR
Sbjct: 601  GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNISTFQSSWISKASAKQREGR 660

Query: 661  AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDP 720
            AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIE FLQKTLDP
Sbjct: 661  AGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEGFLQKTLDP 720

Query: 721  PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL 780
            PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL
Sbjct: 721  PVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTL 780

Query: 781  ACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVR 840
            ACA DYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRG + R
Sbjct: 781  ACALDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRG-QAR 840

Query: 841  FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPM 900
            FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILH VLVAGLYP 
Sbjct: 841  FCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHTVLVAGLYPK 900

Query: 901  VGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHI 960
            VGRLLPPQK+GKRAVVET SGSRVLLH HSLNFELSLKQTD+HPLIVYDE+TRGDGGTHI
Sbjct: 901  VGRLLPPQKRGKRAVVETCSGSRVLLHRHSLNFELSLKQTDNHPLIVYDEVTRGDGGTHI 960

Query: 961  RNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSN 1020
            RNCTVVGPLPLLMVAKDIAVAPAK SDNCKGGTENNNNGN EAGIDETAQEKMDIEN SN
Sbjct: 961  RNCTVVGPLPLLMVAKDIAVAPAKMSDNCKGGTENNNNGNDEAGIDETAQEKMDIENKSN 1020

Query: 1021 QQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV 1080
            QQPEEMIMSSPDN+VTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV
Sbjct: 1021 QQPEEMIMSSPDNAVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPV 1080

Query: 1081 LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGHFAPGRSVGTHKKVSWFHKSHP 1140
            LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIG FAPG+SVGTHKK         
Sbjct: 1081 LGASMHALACILSYDGLSGISLESVEMLTSMVNATEIGQFAPGKSVGTHKK--------- 1140

Query: 1141 NYNDFTVPEANGTSILNDPLSQNLLPTPDFRTANPSDPSSPYFRASPNSVYARSTPQSQR 1200
                                  NLLPTPDFRTANPSDPSSPY RASPNS YARS PQSQR
Sbjct: 1141 ----------------------NLLPTPDFRTANPSDPSSPYVRASPNSAYARSAPQSQR 1200

Query: 1201 E------------QDAAQ-----------QQQQQQHAQEHNTRKQRKSHKERMAAKQQKP 1260
            E            QDAAQ           QQQQQQHAQEHNTRKQR SHKERMAAKQQKP
Sbjct: 1201 EHKPFKLGKPSRDQDAAQQQQQEQQEQQEQQQQQQHAQEHNTRKQRNSHKERMAAKQQKP 1256

Query: 1261 PSGGLSLNGYGLNTYGPYGPRGISLKRPR 1266
            PSG LSLNGYGLNTYGPYG RGISLKRPR
Sbjct: 1261 PSGDLSLNGYGLNTYGPYGHRGISLKRPR 1256

[Close]

BLAST of PI0021968 vs. TAIR 10
Match: AT2G30800.1 (helicase in vascular tissue and tapetum )

HSP 1 Score: 1322.8 bits (3422), Expect = 0.0e+00
Identity = 684/1131 (60.48%), Postives = 855/1131 (75.60%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            M  K+ +      K   +       T+ +E F  + +EV+TFE +LS  ER ++H++CRK
Sbjct: 1    MGNKRFRSDNNAGKPTSVEATRIWATKVIEDFRASGNEVYTFEHNLSNNERGVIHQMCRK 60

Query: 61   MGMTSKSSGHGDQRRVSVYKS---------------KLQMETMKFSEKTKTVLDDLFSMY 120
            MG+ SKSSG G+QRR+S++KS               K +++ + F      +L +LF+ Y
Sbjct: 61   MGIQSKSSGRGEQRRLSIFKSRHKNGNKNEANEKSNKEKLKCVSFPPGADVILQELFTHY 120

Query: 121  PPDDGELGKETVGNHNKKADKQRRKKDDIFWRPSMNKEELMKKLGSYT--MKSVANMKKI 180
            PP DG+    +   ++    KQ + KDD F +P ++ EE+++K+ S +  +K    +K+I
Sbjct: 121  PPCDGDTAATSFTKYSGNKGKQGQWKDDFFRKPQISSEEILEKVASLSSRLKKDKALKEI 180

Query: 181  AEERSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMW-GKGETCKIVC 240
             + RSKLPI SF+D ITS VES+QV+LISGETGCGKTTQVPQ+LLD+MW  K ETCKIVC
Sbjct: 181  TKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVC 240

Query: 241  TQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL 300
            TQPRRISA+SVSERIS ERGE++G +IGYK+RL+SKGGRHSS+V CTNGILLRVL+ +G 
Sbjct: 241  TQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG- 300

Query: 301  GKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATI 360
                         + VSD+THIIVDE+HERD YSDF+L I+RDLLPS P LRLILMSAT+
Sbjct: 301  -----------SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATL 360

Query: 361  DAERFSKYFGGCPIINVPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTE 420
            DAERFS YFGGCP++ VPGFTYPV+  YLEDVLSI+KS  +NHL  + + +SD + +LT+
Sbjct: 361  DAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVLSILKSGGDNHLSSTNLSISDHKLDLTD 420

Query: 421  EDKLALDESIDMAWLNGEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVC 480
            EDKLALDE+I +AW N EFD LL+LV+S GS +I+NYQH  T LTPLMV AGKGR+SDVC
Sbjct: 421  EDKLALDEAIILAWTNDEFDALLDLVSSRGSHEIYNYQHQSTWLTPLMVFAGKGRISDVC 480

Query: 481  MLLSFGAMCELQAKDGTTALELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAK- 540
            MLLSFGA   L++KDG TALELAE  +Q E A+ IR+H +NS SNS++ ++L+  Y+A  
Sbjct: 481  MLLSFGADWSLKSKDGMTALELAEAENQLEAAQIIREHADNSQSNSQQGQQLLDKYMATI 540

Query: 541  NSNSVDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICL 600
            N   VDV LI+QL+ KIC DS++GAILVFLPGWDDI+KTR+RL  NP F D++KF IICL
Sbjct: 541  NPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICL 600

Query: 601  HSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVS 660
            HSMVP+ EQKKVF RPPPGCRKI+L+TNIAE+A+TIDDVVYVIDSG MKEKSYDPY+NVS
Sbjct: 601  HSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVS 660

Query: 661  TFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVK 720
            T QSSW+SKA+AKQR+GRAGRCQPGICYHLYS+ RA+S+PDF+VPEIKRMP+EELCLQVK
Sbjct: 661  TLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVK 720

Query: 721  LLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTS 780
            +LDPNCK  DFLQK LDPPV  +I NA+ +LQDIGAL+  E+LTELG+K G LPVHP+ S
Sbjct: 721  ILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLIS 780

Query: 781  KMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAV 840
            KML FA+L+NCLDPALTLACA+DYK+PFT+PM P ER+KAAAAK ELASL GG SD LAV
Sbjct: 781  KMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAV 840

Query: 841  VAAFDCWKNAKGRGEEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLN 900
            VAAF+CWKNAKGRG    FCS+Y++S S M ML  MR QLE EL ++G IP D+S+C+ N
Sbjct: 841  VAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQN 900

Query: 901  ACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDS 960
            + DPGIL AVL  GLYPMVGRL P     +R +VET SG++V +H  S NF LS K+ D 
Sbjct: 901  SRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYD- 960

Query: 961  HPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGE 1020
              L+V+DEITRGDGG HIRNCTV   LPLL+++ +IAVAP   SD+     E  ++    
Sbjct: 961  ESLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTGSSDSDDSNEEEEDDEEVA 1020

Query: 1021 AGIDE-----TAQEKMDIENNSNQQPEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYC 1080
            A  +E     T +E MDI    +++  +M MSSP+NSV +VVDRWL F + AL++AQ+Y 
Sbjct: 1021 ANTNEEVAANTNEEGMDIHKEESRRGAKM-MSSPENSVKLVVDRWLPFRTTALEVAQMYI 1080

Query: 1081 LRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLESVEML 1108
            LRERL ++ILFKV HP   LPP LGASMHA+A ILSYDG +G+S     M+
Sbjct: 1081 LRERLMASILFKVTHPREHLPPHLGASMHAIAGILSYDGHAGLSCPPESMV 1117

[Close]

BLAST of PI0021968 vs. TAIR 10
Match: AT1G06670.1 (nuclear DEIH-boxhelicase )

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 640/1175 (54.47%), Postives = 828/1175 (70.47%), Query Frame = 0


Query: 1    MAKKKQKKGEQKPKSKPISNVGCAITQALERFCLTNDEVFTFEADLSKRERALVHEVCRK 60
            MAKKK    +    ++     G   T+ LE F  + ++ + FE  L+  ER ++H++CR 
Sbjct: 1    MAKKK----KDTKHTRLCEATGAWATKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRT 60

Query: 61   MGMTSKSSGHGDQRRVSVYK------------------------------SKLQMET--- 120
            MG+ SKS+G G++RR+S++K                              SK + ET   
Sbjct: 61   MGLRSKSNGSGEERRLSLFKGDGISKSDKRRMYEARNQKEKEGDGISKSYSKHRYETRFQ 120

Query: 121  -----------------MKFSEKTKTVLDDLFSMYPPDDGE-----LGKETVGNHNKKAD 180
                             + F  + K VL DLF+ YPP DG+     LG  T GN N    
Sbjct: 121  KAGGIRKTRISPKKLKCVSFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTTGNVNS--- 180

Query: 181  KQRRKKDDIFWRPSMNKEELMKKLGSYT--MKSVANMKKIAEERSKLPIASFRDVITSTV 240
                 KDD F +P M K ++   + S +  +K   + ++I E RSKLPIASFRD I S V
Sbjct: 181  ---NWKDDFFKKPHMTKHDIENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAV 240

Query: 241  ESHQVVLISGETGCGKTTQVPQFLLDYMW-GKGETCKIVCTQPRRISAVSVSERISYERG 300
            ES+QVVLI+GETGCGKTTQVPQ+LLD+MW  K E CKI+CTQPRRISA+SVS+RIS+ERG
Sbjct: 241  ESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAISVSDRISWERG 300

Query: 301  ENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGLGKLTMEASRKSRKNVVSDLT 360
            E +G  +GYK+RL+S+GGR SS+V CTNGILLRVLI +G+             + V D+T
Sbjct: 301  ETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGV------------NSSVPDIT 360

Query: 361  HIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILMSATIDAERFSKYFGGCPIINVPGF 420
            HIIVDE+HERD YSDF+L ILRDLLPS P LRLILMSAT+DAERFS+YFGGCP++ VPGF
Sbjct: 361  HIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGF 420

Query: 421  TYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDEEPELTEEDKLALDESIDMAWLNGEFD 480
            TYPV+ F+L+D LS++ S + +HL      +S  + +  +EDK++LDE+ID+AW N EFD
Sbjct: 421  TYPVRTFFLDDALSVLNSDKNSHL------LSAVKRDFKDEDKVSLDEAIDLAWTNDEFD 480

Query: 481  PLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTAL 540
             L++LV+S GS + +NYQ+S TGLTPLMV AGKGRVSDVC LLS GA C L++K+G TAL
Sbjct: 481  CLVDLVSSEGSHEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLSVGADCTLKSKEGITAL 540

Query: 541  ELAERGDQKETAEAIRKHLENSMSNSKEERRLIGAYLAK-NSNSVDVRLIEQLLGKICLD 600
            ELAE+ +Q ETA+ IR+H  N  SNS++ + L+  Y+A      VDV LI +L+ KIC D
Sbjct: 541  ELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSD 600

Query: 601  SKEGAILVFLPGWDDISKTRERLSVNPLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGC 660
            SK+GAILVFLPGW++ISKT+E+L  +  F  ++KF+I+CLHS VP++EQKKVF RPP GC
Sbjct: 601  SKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGC 660

Query: 661  RKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYSNVSTFQSSWISKASAKQREGRAG 720
            RKI+L+TNIAE+A+TIDDVVYVIDSG MKEKSYDPY++VST QSSW+SKA+AKQR GRAG
Sbjct: 661  RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAG 720

Query: 721  RCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPPV 780
            RCQ GICYHLYSK RA+SLP+++VPE+ RMP++ELCLQVK+LDPNC + DFLQK +DPPV
Sbjct: 721  RCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPV 780

Query: 781  FDTIRNAILVLQDIGALSLDEKLTELGKKLGSLPVHPVTSKMLIFAILMNCLDPALTLAC 840
              +I NA+++L+DIGAL+ +E+LTELG+K G LPVHP  SKM+ FAIL+NCLDPAL LAC
Sbjct: 781  AQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILAC 840

Query: 841  ASDYKDPFTLPMLPSERKKAAAAKAELASLYGGHSDQLAVVAAFDCWKNAKGRGEEVRFC 900
            A+D KDPFT+P+ P +RKKAAAAK ELASLYG HSD LA VAAF CWKNAK  G+   FC
Sbjct: 841  AADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFC 900

Query: 901  SKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDVSTCNLNACDPGILHAVLVAGLYPMVG 960
            SKY+IS   M  L  + R+L+ EL ++G IP   S C+LNA DPGIL AV+  GLYPM+G
Sbjct: 901  SKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPMLG 960

Query: 961  RLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELSLKQTDSHPLIVYDEITRGDGGTHIRN 1020
            R+ P  K   R+V+ET +G++V +   S N ++S  + D   LIV+DEITRGD G  IR+
Sbjct: 961  RMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFD-EALIVFDEITRGDWGVVIRS 1020

Query: 1021 CTVVGPLPLLMVAKDIAVAPAKESDNCKGGTENNNNGNGEAGIDETAQEKMDIENNSNQQ 1080
            CTV+  +P+L+ +++IAV+  +  D  K   E ++   G  G      + MDI+     +
Sbjct: 1021 CTVLPTIPVLLFSREIAVSTTESYDAVKSDDEEDHK-VGNVG------DAMDIDKEVG-R 1080

Query: 1081 PEEMIMSSPDNSVTVVVDRWLQFWSKALDIAQLYCLRERLSSAILFKVKHPNGVLPPVLG 1115
            P E IM  P+NSV VVVDRWL F   A +IAQ+Y LRERL ++ILFKVKHP   LPP LG
Sbjct: 1081 PGEKIMLGPENSVKVVVDRWLPFKVTAFEIAQMYILRERLMASILFKVKHPKENLPPHLG 1138

[Close]

BLAST of PI0021968 vs. TAIR 10
Match: AT2G35920.1 (RNA helicase family protein )

HSP 1 Score: 510.4 bits (1313), Expect = 4.2e-144
Identity = 321/845 (37.99%), Postives = 459/845 (54.32%), Query Frame = 0


Query: 154 MKSVANMKKIAEERSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWG 213
           +K+  ++K +   R KLP    ++   ++V  +QV+++SGETGCGKTTQ+PQF+L+    
Sbjct: 212 LKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEIS 271

Query: 214 --KGETCKIVCTQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNG 273
             +G  C I+CTQPRRISA+SV+ RIS ERGE++G  +GY+IRLESK    + ++ CT G
Sbjct: 272 SLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTG 331

Query: 274 ILLRVLISEGLGKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYP 333
           +LLR LI +                 +++++H++VDE+HER    DF+L ILRDLLP  P
Sbjct: 332 VLLRRLIED---------------PNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRP 391

Query: 334 QLRLILMSATIDAERFSKYFGGCPIINVPGFTYPVKNFYLEDVLS----IVKSSEENHLD 393
            LRLILMSATI+A+ FS YFG  P +++PGFT+PV   +LEDVL      +KSS+  +  
Sbjct: 392 DLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSDSGNYQ 451

Query: 394 DSIVGVSDEEPELTEEDKLALDESIDMAWLNGEFDPLLELVASGGSSQIFNYQHSVTGLT 453
            S  G    E E  ++D   L E ID   +N  +                          
Sbjct: 452 GSSRG-RRRESESKKDDLTTLFEDID---INSHY-------------------------- 511

Query: 454 PLMVLAGKGRVSDVCMLLSFGAMCELQAKDGTTALELAERGDQKETAEAIRKHLENSMSN 513
                                                      K  + A R  LE     
Sbjct: 512 -------------------------------------------KSYSSATRNSLE----- 571

Query: 514 SKEERRLIGAYLAKNSNSVDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSVN 573
                       A +   +DV L+E  +  IC     GAILVFL GWD+ISK  E++++N
Sbjct: 572 ------------AWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMN 631

Query: 574 PLFKDASKFLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSG 633
               D+SKFL++ LH  +P+  Q+++F RPPP  RKI+L+TNIAE++ITIDDVVYV+D G
Sbjct: 632 NFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 691

Query: 634 WMKEKSYDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPE 693
             KE SYD  + V+    SWISKASA QR GRAGR Q G+CY LY K    + P +Q+PE
Sbjct: 692 KAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPE 751

Query: 694 IKRMPIEELCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTEL 753
           I R P++ELCL +K L     I  FL K L PP    + NAI +L+ IGAL+  E+LT L
Sbjct: 752 IIRTPLQELCLHIKSLQVG-SIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPL 811

Query: 754 GKKLGSLPVHPVTSKMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAAKAE 813
           G+ L +LPV P   KML+   +  C++PALT+A A  Y+ PF LP+  + +++A  AK  
Sbjct: 812 GRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPL--NRKEEADEAKRY 871

Query: 814 LASLYGGHSDQLAVVAAFDCWKNAKGRGEEVRFCSKYYISSSTMTMLSGMRRQLEMELVQ 873
            A      SD +A++ A++ +++AK  G E  FC + ++S  T+ M+  MR Q    L  
Sbjct: 872 FAG--DSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSD 931

Query: 874 NGFIPED-VSTCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVLLH 933
            GF+ +   +  N  + D  ++ AVL AGLYP V   +  +++GKR    T    +V +H
Sbjct: 932 IGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNV---VQCKRRGKRTAFYTKELGKVDIH 939

Query: 934 PHSLNFELSLKQTDSHPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIAVAPAKESD 992
           P S+N  ++L    S P +VY E  +     +IR+ T +    LLM   ++  +   E  
Sbjct: 992 PGSVNARVNL---FSLPYLVYSEKVK-TTSVYIRDSTNISDYALLMFGGNLIPSKTGEGI 939

[Close]

BLAST of PI0021968 vs. TAIR 10
Match: AT1G48650.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 483.0 bits (1242), Expect = 7.2e-136
Identity = 297/823 (36.09%), Postives = 441/823 (53.58%), Query Frame = 0


Query: 161 KKIAEERSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQFLL--DYMWGKGETC 220
           +K+   R  LP    +D +   + ++QVV++SGETGCGKTTQ+PQ++L  +    +G TC
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349

Query: 221 KIVCTQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLI 280
            I+CTQPRRISA+SVSER++ ERGE +G  +GYK+RLE   GR + ++ CT G+LLR L+
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 409

Query: 281 SEGLGKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILM 340
            +           +S K V    TH++VDE+HER    DF+L +L+DLLP  P L+LILM
Sbjct: 410 VD-----------RSLKGV----THVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILM 469

Query: 341 SATIDAERFSKYFGGCPIINVPGFTYPVKNFYLEDVL--SIVKSSEENHLDDSIVGVSDE 400
           SAT++AE FS YFGG P +++PGFTYPV+  +LED L  S  + +  N +DD        
Sbjct: 470 SATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDD-------- 529

Query: 401 EPELTEEDKLALDESIDMAWLNGEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKG 460
                EE    + +         +F     L++S                          
Sbjct: 530 ---YGEEKTWKMQK-------QAQFKKRKSLISSA------------------------- 589

Query: 461 RVSDVCMLLSFGAMCELQAKDGTTALELAE-RGDQKETAEAIRKHLENSMSNSKEERRLI 520
            V D                    ALE A+ +G    T +++                  
Sbjct: 590 -VED--------------------ALEAADFKGYNFRTRDSLS----------------- 649

Query: 521 GAYLAKNSNSVDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASK 580
                 + +S+   LIE +L  I    + GA+LVF+ GWDDI+  + +L  + L  D +K
Sbjct: 650 ----CWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNK 709

Query: 581 FLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 640
            L++  H  + S EQ+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G  KE SYD
Sbjct: 710 VLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYD 769

Query: 641 PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 700
             +N      SWISKA+A+QR GRAGR  PG CYHLY +    +  D+Q PE+ R P++ 
Sbjct: 770 ALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQS 829

Query: 701 LCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLP 760
           LCLQ+K L     I +FL + L PP   +++NA+  L+ IGAL  DE LT LGK L  LP
Sbjct: 830 LCLQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLP 889

Query: 761 VHPVTSKMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 820
           V P   KMLI   + NCLDP +T+      +DPF +P      KK  A  A        +
Sbjct: 890 VEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPF----DKKDLAETARSKFSGRDY 949

Query: 821 SDQLAVVAAFDCWKNAKGRGEEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDV 880
           SD L +V A++ WK+A+       +C K ++SS T+  +  MR+Q    L++   + +++
Sbjct: 950 SDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNI 999

Query: 881 STCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELS 940
             C+  + D  ++ A++ AG++P V  ++    K K   ++T    +VLL+  S+N  + 
Sbjct: 1010 EGCSKLSHDEHLVRAIICAGMFPGVCSVV---NKEKSITLKTMEDGQVLLYSSSVNGNVP 999

Query: 941 LKQTDSHPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIA 979
           +      P +V+++  + +    +R+ T V    LL+    I+
Sbjct: 1070 M---IPFPWLVFNDKVKVN-SVFLRDSTAVSDSVLLLFGDKIS 999

[Close]

BLAST of PI0021968 vs. TAIR 10
Match: AT1G48650.2 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 483.0 bits (1242), Expect = 7.2e-136
Identity = 297/823 (36.09%), Postives = 441/823 (53.58%), Query Frame = 0


Query: 161 KKIAEERSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQFLL--DYMWGKGETC 220
           +K+   R  LP    +D +   + ++QVV++SGETGCGKTTQ+PQ++L  +    +G TC
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349

Query: 221 KIVCTQPRRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLI 280
            I+CTQPRRISA+SVSER++ ERGE +G  +GYK+RLE   GR + ++ CT G+LLR L+
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 409

Query: 281 SEGLGKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYPQLRLILM 340
            +           +S K V    TH++VDE+HER    DF+L +L+DLLP  P L+LILM
Sbjct: 410 VD-----------RSLKGV----THVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILM 469

Query: 341 SATIDAERFSKYFGGCPIINVPGFTYPVKNFYLEDVL--SIVKSSEENHLDDSIVGVSDE 400
           SAT++AE FS YFGG P +++PGFTYPV+  +LED L  S  + +  N +DD        
Sbjct: 470 SATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDD-------- 529

Query: 401 EPELTEEDKLALDESIDMAWLNGEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKG 460
                EE    + +         +F     L++S                          
Sbjct: 530 ---YGEEKTWKMQK-------QAQFKKRKSLISSA------------------------- 589

Query: 461 RVSDVCMLLSFGAMCELQAKDGTTALELAE-RGDQKETAEAIRKHLENSMSNSKEERRLI 520
            V D                    ALE A+ +G    T +++                  
Sbjct: 590 -VED--------------------ALEAADFKGYNFRTRDSLS----------------- 649

Query: 521 GAYLAKNSNSVDVRLIEQLLGKICLDSKEGAILVFLPGWDDISKTRERLSVNPLFKDASK 580
                 + +S+   LIE +L  I    + GA+LVF+ GWDDI+  + +L  + L  D +K
Sbjct: 650 ----CWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNK 709

Query: 581 FLIICLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYD 640
            L++  H  + S EQ+ +F RPP G RKI+L+TN+AET+ITI+DVVYVID G  KE SYD
Sbjct: 710 VLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYD 769

Query: 641 PYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPIEE 700
             +N      SWISKA+A+QR GRAGR  PG CYHLY +    +  D+Q PE+ R P++ 
Sbjct: 770 ALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQS 829

Query: 701 LCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGSLP 760
           LCLQ+K L     I +FL + L PP   +++NA+  L+ IGAL  DE LT LGK L  LP
Sbjct: 830 LCLQIKSLGLG-SISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLP 889

Query: 761 VHPVTSKMLIFAILMNCLDPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYGGH 820
           V P   KMLI   + NCLDP +T+      +DPF +P      KK  A  A        +
Sbjct: 890 VEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPF----DKKDLAETARSKFSGRDY 949

Query: 821 SDQLAVVAAFDCWKNAKGRGEEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPEDV 880
           SD L +V A++ WK+A+       +C K ++SS T+  +  MR+Q    L++   + +++
Sbjct: 950 SDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQF-FNLLKEASLIDNI 999

Query: 881 STCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVLLHPHSLNFELS 940
             C+  + D  ++ A++ AG++P V  ++    K K   ++T    +VLL+  S+N  + 
Sbjct: 1010 EGCSKLSHDEHLVRAIICAGMFPGVCSVV---NKEKSITLKTMEDGQVLLYSSSVNGNVP 999

Query: 941 LKQTDSHPLIVYDEITRGDGGTHIRNCTVVGPLPLLMVAKDIA 979
           +      P +V+++  + +    +R+ T V    LL+    I+
Sbjct: 1070 M---IPFPWLVFNDKVKVN-SVFLRDSTAVSDSVLLLFGDKIS 999

The following BLAST results are available for this feature:

BLAST of PI0021968 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4INY4	0.0e+00	60.48	DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana OX=3702 GN=HVT...	[more]
F4IDQ6	0.0e+00	54.47	DExH-box ATP-dependent RNA helicase DExH2 OS=Arabidopsis thaliana OX=3702 GN=NIH...	[more]
Q9H6S0	3.7e-169	34.44	3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2	[more]
Q5R746	1.4e-168	34.24	3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2	[more]
B2RR83	2.4e-168	34.49	3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1	[more]

BLAST of PI0021968 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BTJ2	0.0e+00	93.64	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0L085	0.0e+00	96.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G063450 PE=4 SV=1	[more]
A0A1S3BRU6	0.0e+00	91.39	DExH-box ATP-dependent RNA helicase DExH6 isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]
A0A1S3BSG9	0.0e+00	93.85	DExH-box ATP-dependent RNA helicase DExH6 isoform X3 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1FT07	0.0e+00	86.63	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 OS=Cucurbita moschata OX=36...	[more]

BLAST of PI0021968 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740756.1	0.0e+00	94.95	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucumis sativus]	[more]
XP_008451833.1	0.0e+00	93.64	PREDICTED: DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Cucumis melo]	[more]
XP_038906440.1	0.0e+00	92.66	DExH-box ATP-dependent RNA helicase DExH6 isoform X1 [Benincasa hispida]	[more]
KGN53521.2	0.0e+00	92.61	hypothetical protein Csa_014615 [Cucumis sativus]	[more]
XP_008451834.1	0.0e+00	91.39	PREDICTED: DExH-box ATP-dependent RNA helicase DExH6 isoform X2 [Cucumis melo]	[more]

BLAST of PI0021968 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30800.1	0.0e+00	60.48	helicase in vascular tissue and tapetum	[more]
AT1G06670.1	0.0e+00	54.47	nuclear DEIH-boxhelicase	[more]
AT2G35920.1	4.2e-144	37.99	RNA helicase family protein	[more]
AT1G48650.1	7.2e-136	36.09	DEA(D/H)-box RNA helicase family protein	[more]
AT1G48650.2	7.2e-136	36.09	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 491..511
None	No IPR available	GENE3D	1.20.120.1080		coord: 707..813 e-value: 7.7E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 988..1003
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 983..1003
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1155..1214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1155..1270
None	No IPR available	PANTHER	PTHR18934:SF227	DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH2	coord: 87..1115 coord: 22..81
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 87..1115 coord: 22..81
None	No IPR available	CDD	cd17917	DEXHc_RHA-like	coord: 186..359 e-value: 2.54499E-85 score: 272.415
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 510..672 e-value: 4.95344E-76 score: 247.061
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 171..369 e-value: 1.1E-23 score: 94.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 180..360 score: 20.153955
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 564..664 e-value: 6.1E-16 score: 69.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 534..663 e-value: 4.4E-15 score: 56.0
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 530..704 score: 14.099077
IPR001374	R3H domain	SMART	SM00393	R3H_4	coord: 9..81 e-value: 2.2E-6 score: 37.2
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 25..80 e-value: 9.6E-11 score: 41.5
IPR001374	R3H domain	PROSITE	PS51061	R3H	coord: 19..82 score: 12.448596
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 727..822 e-value: 2.4E-20 score: 83.6
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 728..817 e-value: 4.7E-16 score: 59.0
IPR036867	R3H domain superfamily	GENE3D	3.30.1370.50		coord: 9..86 e-value: 2.9E-16 score: 61.0
IPR036867	R3H domain superfamily	SUPERFAMILY	82708	R3H domain	coord: 25..80
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 185..345 e-value: 4.9E-9 score: 36.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 115..361 e-value: 1.3E-76 score: 258.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 517..681 e-value: 2.9E-55 score: 188.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 532..793
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 152..372
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 888..976 e-value: 2.2E-11 score: 43.9
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 408..516 e-value: 6.3E-8 score: 34.3
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 428..503

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021968.1	PI0021968.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0004386	helicase activity