PI0021920 (gene) Melon (PI 482460) v1

Overview
NamePI0021920
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr09: 13923359 .. 13923802 (+)
RNA-Seq ExpressionPI0021920
SyntenyPI0021920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGATGTACCTATTGTACCTCCACCAGTTCACAGGGGACGTGTTCGAGTGGAAGAAGCTAAACTTAATGAAGTTTATCATAATGTAGAAGAAGTGCCTCCAGTGACAAAAACACAAAGCCAAACTGGTTGTGGTAGTCTGTTGATGATGATGCCAGCATTTGAAGCAAGATATTGTGATTCTGAAGTCAATGCAAGATATTATAACTCAGGGATCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGACACGGATGCGACCGTAGAGAATATAACGAATTTTGTACTATGAAGCACCTACAGACGTATCAGATCCACAAGAGTACCGATAAGAACCAGAGAATCAAGAGGAGCCAGGACAACCTAGAGTTTAGAGTCGATGATGACAACCAGCTCGAAATCAACGACGTCTGA

mRNA sequence

ATGTATGATGTACCTATTGTACCTCCACCAGTTCACAGGGGACGTGTTCGAGTGGAAGAAGCTAAACTTAATGAAGTTTATCATAATGTAGAAGAAGTGCCTCCAGTGACAAAAACACAAAGCCAAACTGGTTGTGGTAGTCTGTTGATGATGATGCCAGCATTTGAAGCAAGATATTGTGATTCTGAAGTCAATGCAAGATATTATAACTCAGGGATCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGACACGGATGCGACCGTAGAGAATATAACGAATTTTGTACTATGAAGCACCTACAGACGTATCAGATCCACAAGAGTACCGATAAGAACCAGAGAATCAAGAGGAGCCAGGACAACCTAGAGTTTAGAGTCGATGATGACAACCAGCTCGAAATCAACGACGTCTGA

Coding sequence (CDS)

ATGTATGATGTACCTATTGTACCTCCACCAGTTCACAGGGGACGTGTTCGAGTGGAAGAAGCTAAACTTAATGAAGTTTATCATAATGTAGAAGAAGTGCCTCCAGTGACAAAAACACAAAGCCAAACTGGTTGTGGTAGTCTGTTGATGATGATGCCAGCATTTGAAGCAAGATATTGTGATTCTGAAGTCAATGCAAGATATTATAACTCAGGGATCGGTCCATCGTCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGACACGGATGCGACCGTAGAGAATATAACGAATTTTGTACTATGAAGCACCTACAGACGTATCAGATCCACAAGAGTACCGATAAGAACCAGAGAATCAAGAGGAGCCAGGACAACCTAGAGTTTAGAGTCGATGATGACAACCAGCTCGAAATCAACGACGTCTGA

Protein sequence

MYDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYCDSEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEFCTMKHLQTYQIHKSTDKNQRIKRSQDNLEFRVDDDNQLEINDV
Homology
[Close]
BLAST of PI0021920 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.5e-43
Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 0 

Query: 2   YDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYCD 61
           +D+ +    +H GRVRVEEA+L+EVYHNVEEVPP T+TQSQTG GS + MMP F A YCD
Sbjct: 259 FDMDVTQEYIHWGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYCD 318

Query: 62  SEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEFCTMKHLQTYQIHKSTDK 121
           SEV   YY++GI P SSYMDVGPS SYMHGHG           C MKHLQ YQI KST+K
Sbjct: 319 SEVGTGYYDAGISPLSSYMDVGPSNSYMHGHGRALG--NITNICIMKHLQMYQIDKSTNK 378

Query: 122 NQRIKRSQDNLEFRVDDDNQLEINDV 148
           NQR KR+++N+EFRV+ DNQL+I++V
Sbjct: 379 NQRTKRTENNIEFRVNVDNQLKIDEV 402

[Close]
BLAST of PI0021920 vs. ExPASy TrEMBL
Match: A0A5D3D5N3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00700 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.4e-38
Identity = 79/103 (76.70%), Postives = 88/103 (85.44%), Query Frame = 0 

Query: 2   YDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYCD 61
           YD+PIVPPPVH+G VRVEE +L+EVY NVEEVPP T+TQSQTGCGSL MMM  F +RYCD
Sbjct: 8   YDLPIVPPPVHKGCVRVEEVELDEVYRNVEEVPPTTQTQSQTGCGSLTMMMSTFGSRYCD 67

Query: 62  SEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEF 105
           SEV  RYYN G+GPSSSYMDVGPSTSYMHGHGHG    E+NE+
Sbjct: 68  SEVGTRYYNLGVGPSSSYMDVGPSTSYMHGHGHG--YWEHNEY 108

[Close]
BLAST of PI0021920 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.5e-36
Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 1   MYDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYC 60
           MYD+PIVPP VHRGRVRVEE +L+EVYHNVEEVPP T+TQSQTG GS +MMMP F A YC
Sbjct: 1   MYDLPIVPPRVHRGRVRVEEVELDEVYHNVEEVPPTTQTQSQTGYGSPMMMMPTFGAGYC 60

Query: 61  DSEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEFCTMKHLQTYQIHKSTD 120
           DSEV+  YY++GIGP SSYMDVGPS SYMHGHG G    E+NE+  + H     +    +
Sbjct: 61  DSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYG--EHNEY--LYHEAPADVSDRQE 120

Query: 121 KNQRIKRSQDNLEFRV 137
             Q  +  +D  + RV
Sbjct: 121 YQQEPENQEDREQHRV 132

[Close]
BLAST of PI0021920 vs. ExPASy TrEMBL
Match: A0A5A7VEC1 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001470 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 7.1e-35
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 0 

Query: 1   MYDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYC 60
           MYD+PIVP P+HRGR+RVEEA+L+EVYHNVEEVPP TKTQSQTG GSL+ MMP F ARYC
Sbjct: 99  MYDLPIVPLPIHRGRIRVEEAELDEVYHNVEEVPPTTKTQSQTGYGSLMTMMPTFGARYC 158

Query: 61  DSEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEF 105
           DSEV   YY++G+  SSSYMDVGPSTSYMHG+  G    E+NE+
Sbjct: 159 DSEVGRGYYDAGVDLSSSYMDVGPSTSYMHGYERGYG--EHNEY 200

[Close]
BLAST of PI0021920 vs. ExPASy TrEMBL
Match: A0A5A7U7C3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00140 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.7e-34
Identity = 77/112 (68.75%), Postives = 87/112 (77.68%), Query Frame = 0 

Query: 2   YDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYCD 61
           YD+PIVPP VH+G VRVEE +L+EVY NVEEVPP T+TQSQTGCGSL MMM  F +RYCD
Sbjct: 8   YDLPIVPPLVHKGCVRVEEVELDEVYRNVEEVPPTTQTQSQTGCGSLTMMMSTFGSRYCD 67

Query: 62  SEVNARYYNSGIGPSSSYMDVG---------PSTSYMHGHGHGCDRREYNEF 105
           SEV  RYYN G+GPSSSYM+VG         PSTSYMHGHGHG    E+NE+
Sbjct: 68  SEVGTRYYNLGVGPSSSYMNVGPSTSYMDVSPSTSYMHGHGHG--YWEHNEY 117

[Close]
BLAST of PI0021920 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42
Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 0 

Query: 2   YDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYCD 61
           +D+ +    +H GRVRVEEA+L+EVYHNVEEVPP T+TQSQTG GS + MMP F A YCD
Sbjct: 259 FDMDVTQEYIHWGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYCD 318

Query: 62  SEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEFCTMKHLQTYQIHKSTDK 121
           SEV   YY++GI P SSYMDVGPS SYMHGHG           C MKHLQ YQI KST+K
Sbjct: 319 SEVGTGYYDAGISPLSSYMDVGPSNSYMHGHGRALG--NITNICIMKHLQMYQIDKSTNK 378

Query: 122 NQRIKRSQDNLEFRVDDDNQLEINDV 148
           NQR KR+++N+EFRV+ DNQL+I++V
Sbjct: 379 NQRTKRTENNIEFRVNVDNQLKIDEV 402

[Close]
BLAST of PI0021920 vs. NCBI nr
Match: TYK18868.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 4.9e-38
Identity = 79/103 (76.70%), Postives = 88/103 (85.44%), Query Frame = 0 

Query: 2   YDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYCD 61
           YD+PIVPPPVH+G VRVEE +L+EVY NVEEVPP T+TQSQTGCGSL MMM  F +RYCD
Sbjct: 8   YDLPIVPPPVHKGCVRVEEVELDEVYRNVEEVPPTTQTQSQTGCGSLTMMMSTFGSRYCD 67

Query: 62  SEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEF 105
           SEV  RYYN G+GPSSSYMDVGPSTSYMHGHGHG    E+NE+
Sbjct: 68  SEVGTRYYNLGVGPSSSYMDVGPSTSYMHGHGHG--YWEHNEY 108

[Close]
BLAST of PI0021920 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-35
Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 1   MYDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYC 60
           MYD+PIVPP VHRGRVRVEE +L+EVYHNVEEVPP T+TQSQTG GS +MMMP F A YC
Sbjct: 1   MYDLPIVPPRVHRGRVRVEEVELDEVYHNVEEVPPTTQTQSQTGYGSPMMMMPTFGAGYC 60

Query: 61  DSEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEFCTMKHLQTYQIHKSTD 120
           DSEV+  YY++GIGP SSYMDVGPS SYMHGHG G    E+NE+  + H     +    +
Sbjct: 61  DSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYG--EHNEY--LYHEAPADVSDRQE 120

Query: 121 KNQRIKRSQDNLEFRV 137
             Q  +  +D  + RV
Sbjct: 121 YQQEPENQEDREQHRV 132

[Close]
BLAST of PI0021920 vs. NCBI nr
Match: KAA0064245.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK18615.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-34
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 0 

Query: 1   MYDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYC 60
           MYD+PIVP P+HRGR+RVEEA+L+EVYHNVEEVPP TKTQSQTG GSL+ MMP F ARYC
Sbjct: 99  MYDLPIVPLPIHRGRIRVEEAELDEVYHNVEEVPPTTKTQSQTGYGSLMTMMPTFGARYC 158

Query: 61  DSEVNARYYNSGIGPSSSYMDVGPSTSYMHGHGHGCDRREYNEF 105
           DSEV   YY++G+  SSSYMDVGPSTSYMHG+  G    E+NE+
Sbjct: 159 DSEVGRGYYDAGVDLSSSYMDVGPSTSYMHGYERGYG--EHNEY 200

[Close]
BLAST of PI0021920 vs. NCBI nr
Match: KAA0051214.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 154.8 bits (390), Expect = 5.6e-34
Identity = 77/112 (68.75%), Postives = 87/112 (77.68%), Query Frame = 0 

Query: 2   YDVPIVPPPVHRGRVRVEEAKLNEVYHNVEEVPPVTKTQSQTGCGSLLMMMPAFEARYCD 61
           YD+PIVPP VH+G VRVEE +L+EVY NVEEVPP T+TQSQTGCGSL MMM  F +RYCD
Sbjct: 8   YDLPIVPPLVHKGCVRVEEVELDEVYRNVEEVPPTTQTQSQTGCGSLTMMMSTFGSRYCD 67

Query: 62  SEVNARYYNSGIGPSSSYMDVG---------PSTSYMHGHGHGCDRREYNEF 105
           SEV  RYYN G+GPSSSYM+VG         PSTSYMHGHGHG    E+NE+
Sbjct: 68  SEVGTRYYNLGVGPSSSYMNVGPSTSYMDVSPSTSYMHGHGHG--YWEHNEY 117

The following BLAST results are available for this feature:
BLAST of PI0021920 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TDY55.5e-4363.01Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3D5N32.4e-3876.70GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5D3CXX36.5e-3660.29GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7VEC17.1e-3572.12GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7U7C32.7e-3468.75GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
BLAST of PI0021920 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041168.11.1e-4263.01serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK18868.14.9e-3876.70GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0049532.11.3e-3560.29GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0064245.11.5e-3472.12GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0051214.15.6e-3468.75GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
BLAST of PI0021920 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021920.1PI0021920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048507 meristem development