PI0021873 (gene) Melon (PI 482460) v1

Overview


Name	PI0021873
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr05: 17281098 .. 17281598 (-)
RNA-Seq Expression	PI0021873
Synteny	PI0021873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAAATCATTGAGGCGTTTAAAACCGCCTTAAAAAGGAAGGAAGAAAAGAAGAATATGCTCGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCTCGCGAAGTTTAAAGCTTTGGAGCCTGAAAGAGACCTCGAGGTCATCGCGGAAGAACTCGAGGAAGAGCTGGAGACGATCAGTCCAATTGGTCAAGGGCCACCGCCTAGAAAACAAAAGGAGGTCGCCAGACCATCCAAAATAAAGAAGAAAAGTGGGAGCTCTGGACCTGAAGAGCGCCCATCCGGTGGCGAGGCAAAAACAAAAACACCCTCAATCAACTCATTAATCAAGGTTGAAAAAGGGTTGTTTCCATTCAACGGCCCTCTCCTAGACTTCCTCTACGCACCTATGCAGGCGTTTGGTTGGAAGAAATTTTTCAAGGGGCACACCAAGGTACGCATAGTGTGGTGGAGAAGTTTTACGCCGCTAAACTCAATGCTGAAGAGTTTAGCGTTAAAATAA

mRNA sequence

ATGCAGAAAATCATTGAGGCGTTTAAAACCGCCTTAAAAAGGAAGGAAGAAAAGAAGAATATGCTCGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCTCGCGAAGTTTAAAGCTTTGGAGCCTGAAAGAGACCTCGAGGTCATCGCGGAAGAACTCGAGGAAGAGCTGGAGACGATCAGTCCAATTGGTCAAGGGCCACCGCCTAGAAAACAAAAGGAGGTCGCCAGACCATCCAAAATAAAGAAGAAAAGTGGGAGCTCTGGACCTGAAGAGCGCCCATCCGGTGGCGAGGCAAAAACAAAAACACCCTCAATCAACTCATTAATCAAGGTTGAAAAAGGGTTGTTTCCATTCAACGGCCCTCTCCTAGACTTCCTCTACGCACCTATGCAGGCGTTTGGTTGGAAGAAATTTTTCAAGGGGCACACCAAGGTACGCATAGTGTGGTGGAGAAGTTTTACGCCGCTAAACTCAATGCTGAAGAGTTTAGCGTTAAAATAA

Coding sequence (CDS)

ATGCAGAAAATCATTGAGGCGTTTAAAACCGCCTTAAAAAGGAAGGAAGAAAAGAAGAATATGCTCGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCTCGCGAAGTTTAAAGCTTTGGAGCCTGAAAGAGACCTCGAGGTCATCGCGGAAGAACTCGAGGAAGAGCTGGAGACGATCAGTCCAATTGGTCAAGGGCCACCGCCTAGAAAACAAAAGGAGGTCGCCAGACCATCCAAAATAAAGAAGAAAAGTGGGAGCTCTGGACCTGAAGAGCGCCCATCCGGTGGCGAGGCAAAAACAAAAACACCCTCAATCAACTCATTAATCAAGGTTGAAAAAGGGTTGTTTCCATTCAACGGCCCTCTCCTAGACTTCCTCTACGCACCTATGCAGGCGTTTGGTTGGAAGAAATTTTTCAAGGGGCACACCAAGGTACGCATAGTGTGGTGGAGAAGTTTTACGCCGCTAAACTCAATGCTGAAGAGTTTAGCGTTAAAATAA

Protein sequence

MQKIIEAFKTALKRKEEKKNMLADLSEQVAELLAKFKALEPERDLEVIAEELEEELETISPIGQGPPPRKQKEVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYAPMQAFGWKKFFKGHTKVRIVWWRSFTPLNSMLKSLALK

Homology

[Close]

BLAST of PI0021873 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.3e-12
Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 15  KEEKKNMLADLSEQVAELLAKFKALEPER--DLEVIAEELEEELETISPIGQGPPPRKQK 74
           K++K+  LA LSEQV  ++ + K  E +    ++V+ EE   E+E +SP+G  P P ++ 
Sbjct: 163 KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKG 222

Query: 75  ----EVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYA 134
               E  + SK K+K+G+S P++   G   K     ++ LIK+EKGL PFN PLL+FLY 
Sbjct: 223 LTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLYG 282

Query: 135 PMQAFGWKKFFKGHTKVRI 148
            ++    +KFF   TKV++
Sbjct: 283 LIKTMKLEKFFIEETKVKL 299

[Close]

BLAST of PI0021873 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.3e-12
Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 15  KEEKKNMLADLSEQVAELLAKFKALEPER--DLEVIAEELEEELETISPIGQGPPPRKQK 74
           K++K+  LA LSEQV  ++ + K  E +    ++V+ EE   E+E +SP+G  P P ++ 
Sbjct: 132 KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKG 191

Query: 75  ----EVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYA 134
               E  + SK K+K+G+S P++   G   K     ++ LIK+EKGL PFN PLL+FLY 
Sbjct: 192 LTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLYG 251

Query: 135 PMQAFGWKKFFKGHTKVRI 148
            ++    +KFF   TKV++
Sbjct: 252 LIKTMKLEKFFIEETKVKL 268

[Close]

BLAST of PI0021873 vs. ExPASy TrEMBL
Match: A0A5A7TVC2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001110 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.9e-08
Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 26  SEQVAELLAKFKALEPERDLEVIAEELEEELETISPIGQGPPPRKQKEV--ARPSKIKKK 85
           S QV + L K K +E ++      EE  +E+E ISP+     P +   V   +  K K K
Sbjct: 43  SNQVMKYLEKLKMVEKKK-----IEECNQEIERISPLKPSLRPEELGLVNATQLKKSKNK 102

Query: 86  SGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYAPMQAFGWKKFFKGHT 145
           +G+S P++      +K  T  ++ LIK+EKGL PFNG L DFLY P++A  W+ FF    
Sbjct: 103 AGTSRPKDVQK--RSKMSTQDLDKLIKIEKGLLPFNGHLHDFLYGPIKALKWETFFMDEK 157

[Close]

BLAST of PI0021873 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 69  RKQKEVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYA 128
           + +K    PSK+K+     G E+RP G         I+ LIKVEKGLFPFN  L +F+++
Sbjct: 21  KAKKIEVEPSKLKE--AQRGGEKRPQG---------IDKLIKVEKGLFPFNEALPNFIFS 80

Query: 129 PMQAFGWKKFFKGHTKVRI 148
            ++AFGW KFF G TK  I
Sbjct: 81  SIKAFGWTKFFTGKTKANI 88

[Close]

BLAST of PI0021873 vs. ExPASy TrEMBL
Match: A0A5A7VMD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00650 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 73  EVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYAPMQA 132
           +  RP K K K  +S  E+  +      +   ++ L+K+EKGLF F+G LLDFLY P++A
Sbjct: 17  DTTRPKKDKNKVRTSRSEDVQTSEPLNDQ--KLDKLLKIEKGLFLFSGHLLDFLYEPIKA 76

Query: 133 FGWKKFFKGHTKVRI 148
           F W+KFF+G  KVR+
Sbjct: 77  FKWEKFFRGDAKVRL 89

[Close]

BLAST of PI0021873 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 6.8e-12
Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 15  KEEKKNMLADLSEQVAELLAKFKALEPER--DLEVIAEELEEELETISPIGQGPPPRKQK 74
           K++K+  LA LSEQV  ++ + K  E +    ++V+ EE   E+E +SP+G  P P ++ 
Sbjct: 132 KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKG 191

Query: 75  ----EVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYA 134
               E  + SK K+K+G+S P++   G   K     ++ LIK+EKGL PFN PLL+FLY 
Sbjct: 192 LTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLYG 251

Query: 135 PMQAFGWKKFFKGHTKVRI 148
            ++    +KFF   TKV++
Sbjct: 252 LIKTMKLEKFFIEETKVKL 268

[Close]

BLAST of PI0021873 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 6.8e-12
Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 15  KEEKKNMLADLSEQVAELLAKFKALEPER--DLEVIAEELEEELETISPIGQGPPPRKQK 74
           K++K+  LA LSEQV  ++ + K  E +    ++V+ EE   E+E +SP+G  P P ++ 
Sbjct: 163 KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEKG 222

Query: 75  ----EVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYA 134
               E  + SK K+K+G+S P++   G   K     ++ LIK+EKGL PFN PLL+FLY 
Sbjct: 223 LTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLYG 282

Query: 135 PMQAFGWKKFFKGHTKVRI 148
            ++    +KFF   TKV++
Sbjct: 283 LIKTMKLEKFFIEETKVKL 299

[Close]

BLAST of PI0021873 vs. NCBI nr
Match: KAA0045335.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-07
Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 26  SEQVAELLAKFKALEPERDLEVIAEELEEELETISPIGQGPPPRKQKEV--ARPSKIKKK 85
           S QV + L K K +E ++      EE  +E+E ISP+     P +   V   +  K K K
Sbjct: 43  SNQVMKYLEKLKMVEKKK-----IEECNQEIERISPLKPSLRPEELGLVNATQLKKSKNK 102

Query: 86  SGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYAPMQAFGWKKFFKGHT 145
           +G+S P++      +K  T  ++ LIK+EKGL PFNG L DFLY P++A  W+ FF    
Sbjct: 103 AGTSRPKDVQK--RSKMSTQDLDKLIKIEKGLLPFNGHLHDFLYGPIKALKWETFFMDEK 157

[Close]

BLAST of PI0021873 vs. NCBI nr
Match: KAA0066935.1 (hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-06
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 73  EVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYAPMQA 132
           +  RP K K K  +S  E+  +      +   ++ L+K+EKGLF F+G LLDFLY P++A
Sbjct: 17  DTTRPKKDKNKVRTSRSEDVQTSEPLNDQ--KLDKLLKIEKGLFLFSGHLLDFLYEPIKA 76

Query: 133 FGWKKFFKGHTKVRI 148
           F W+KFF+G  KVR+
Sbjct: 77  FKWEKFFRGDAKVRL 89

[Close]

BLAST of PI0021873 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-06
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 69  RKQKEVARPSKIKKKSGSSGPEERPSGGEAKTKTPSINSLIKVEKGLFPFNGPLLDFLYA 128
           + +K    PSK+K+     G E+RP G         I+ LIKVEKGLFPFN  L +F+++
Sbjct: 21  KAKKIEVEPSKLKE--AQRGGEKRPQG---------IDKLIKVEKGLFPFNEALPNFIFS 80

Query: 129 PMQAFGWKKFFKGHTKVRI 148
            ++AFGW KFF G TK  I
Sbjct: 81  SIKAFGWTKFFTGKTKANI 88

The following BLAST results are available for this feature:

BLAST of PI0021873 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBU7	3.3e-12	38.13	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DQE7	3.3e-12	38.13	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TVC2	4.9e-08	38.52	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UFG4	1.2e-06	45.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VMD3	1.2e-06	44.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0021873 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25768.1	6.8e-12	38.13	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0038829.1	6.8e-12	38.13	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0045335.1	1.0e-07	38.52	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0066935.1	2.5e-06	44.00	hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa]	[more]
KAA0053237.1	2.5e-06	45.57	hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa]	[more]

BLAST of PI0021873 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 8..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021873.1	PI0021873.1	mRNA