Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAAAGACCCACAAAGAGTCGCCCATGAAAATGACTCTGCTTTCTTCAATCCTTCTTCTTCTTCCACTGCCATAATCATACCGCAACCTCCATTTTTCCTCACCTTCTATTTCTCTCCCTCTCTCCTCTTCTCCATTTCCAATTCATCATGATCGGCTCCACCCGCAAGCTTCTCTCAAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAACACCACCATGGAATTCTCTTCTCCTTCTCCAACCAGGTTCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCTCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCCTCCAAGGCTCTCGCTATCGCTACTGGACAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAGTTATCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTTTAGGGCAACGAGAAGACACTGGAGTGGATGAGAGGGAGTCTAATCTTGGCGGCGGTCGGGAGGTTTTCTCGAGGGAGAATCGGAAATCCAGGAAGGAACCTAGGTCTTTGGTTGGTAGGAGTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATTGGAACGACAACGACGAGGAAGAAGAAGAAGAAGAATGATTCTAGTTTGAATATGAGTGCTAAAGTTTCGCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCGTTTCTTATGGTTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGTAGTAATGGCAGCAACAAGAATAGAACAAAATCCACTGGCAGGTAACAGTAACACCATAACTATCAATTAATTGCTTCTTTGATTCACTCTGCTTTTTAACTTGAGATATGAATGTGAGCGTTTGATCTTCTGTGTTGATATGAAAAACAGAGAAAATCACCACCGAATAGAACTATTTCTATTTTGGGTCATTTTCAGGGCTTTCTATAGTATCATAAGAATTTGCTGAGTTGAACATGAATGGGTTTCTACTAAAATGAAGAACTTGCAAATTCAGTATCTCTACGATTTTGGGTAGTAGAATTTCTCAAGCTGTTTTATGCACTAGTAATTCTAAGAACTTCCTGCGTTAAATTGAATAACATGAATGAATTTTCTCTGAAATGAAGGACAACCAAATTCACCATTAAATAGGGCACAGTTTGGGTAGTATAATTTCTCGAGCTGTTTCATGCACTAGTATCCTAAGATTTTTGGGAAGAATAGGAATGGGTTTTCTCTGAAATGAAGAACACACAAATCTCTGCATTAAAAGAGAATCGTCGCTTCTCTGCACCATTTTAAGTAGTGAAAGATTCTCAAGCACCCCATCCTCTAGGAACATAGGAGAATCTGATGAGTTGATGATGAATGATTTTCTCTCTGAAATGAAGGTCACCCAATTTCACCATTCAATAGAATCATCTCTACTCTGCATTGTTCTGGGTCTTGAATTTTCTTTAGAAAACTGCTATAAACTGGGTTGATCTTCATTCTTATGAATCAAAATTTAATTACAGGCGTGCGAATGGAGGTTGCTGGTCATGGATTTATCCCAAATACCATGAACGAGATGAATGAACAAGAGGCTGCTCTGCCATGCACTCAAACAAAGTAAAAGAAGAAGCCATAGGTATATAAAGTTATGGAAATGAAGGCATTAATTTTACAGCGTTTGTAAATTCCTTTCAGTTTTTCAACAAAAATGCTTCTTTTTTGGTTCTTTAATATATATATGTATGCCCTGTGTCCTCCAGGGTTCCTCTTCTTTAAGCTAATTGATAGAATGAATCTCCTTTTTCAACT
mRNA sequence
GAAAAAAAGACCCACAAAGAGTCGCCCATGAAAATGACTCTGCTTTCTTCAATCCTTCTTCTTCTTCCACTGCCATAATCATACCGCAACCTCCATTTTTCCTCACCTTCTATTTCTCTCCCTCTCTCCTCTTCTCCATTTCCAATTCATCATGATCGGCTCCACCCGCAAGCTTCTCTCAAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAACACCACCATGGAATTCTCTTCTCCTTCTCCAACCAGGTTCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCTCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCCTCCAAGGCTCTCGCTATCGCTACTGGACAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAGTTATCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTTTAGGGCAACGAGAAGACACTGGAGTGGATGAGAGGGAGTCTAATCTTGGCGGCGGTCGGGAGGTTTTCTCGAGGGAGAATCGGAAATCCAGGAAGGAACCTAGGTCTTTGGTTGGTAGGAGTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATTGGAACGACAACGACGAGGAAGAAGAAGAAGAAGAATGATTCTAGTTTGAATATGAGTGCTAAAGTTTCGCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCGTTTCTTATGGTTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGTAGTAATGGCAGCAACAAGAATAGAACAAAATCCACTGGCAGGCGTGCGAATGGAGGTTGCTGGTCATGGATTTATCCCAAATACCATGAACGAGATGAATGAACAAGAGGCTGCTCTGCCATGCACTCAAACAAAGTAAAAGAAGAAGCCATAGGTATATAAAGTTATGGAAATGAAGGCATTAATTTTACAGCGTTTGTAAATTCCTTTCAGTTTTTCAACAAAAATGCTTCTTTTTTGGTTCTTTAATATATATATGTATGCCCTGTGTCCTCCAGGGTTCCTCTTCTTTAAGCTAATTGATAGAATGAATCTCCTTTTTCAACT
Coding sequence (CDS)
ATGATCGGCTCCACCCGCAAGCTTCTCTCAAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAACACCACCATGGAATTCTCTTCTCCTTCTCCAACCAGGTTCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCTCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCCTCCAAGGCTCTCGCTATCGCTACTGGACAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAGTTATCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTTTAGGGCAACGAGAAGACACTGGAGTGGATGAGAGGGAGTCTAATCTTGGCGGCGGTCGGGAGGTTTTCTCGAGGGAGAATCGGAAATCCAGGAAGGAACCTAGGTCTTTGGTTGGTAGGAGTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATTGGAACGACAACGACGAGGAAGAAGAAGAAGAAGAATGATTCTAGTTTGAATATGAGTGCTAAAGTTTCGCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCGTTTCTTATGGTTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGTAGTAATGGCAGCAACAAGAATAGAACAAAATCCACTGGCAGGCGTGCGAATGGAGGTTGCTGGTCATGGATTTATCCCAAATACCATGAACGAGATGAATGA
Protein sequence
MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTRFSRPALNHDIFRSWNGKQIHLRDDHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFPKSIGTTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNGSIKSSSSSSSNGSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE
Homology
BLAST of PI0021839 vs. ExPASy TrEMBL
Match:
A0A1S4E6L8 (uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=4 SV=1)
HSP 1 Score: 519.6 bits (1337), Expect = 8.1e-144
Identity = 271/285 (95.09%), Postives = 276/285 (96.84%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTRFSRPALNHDIFRSWNGKQIHLRDDHP 60
MIG+ RKLLSSPTESPDFRALNTTMEFSSPSPTR SRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1 MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
Query: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
Query: 121 EQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFP 180
EQPMV+GQREDTGVDER+SNLGG REVFSRENRKSRKE R+LVGRSSMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
Query: 181 KSIGTTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
KSIG TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG
Sbjct: 181 KSIG-TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
Query: 241 SIKSSSSSSSNGSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 286
SIKSSSSSS SNGSNK+RTKSTGRRA GGCWSWIYPKYHERDE
Sbjct: 241 SIKSSSSSS---SNGSNKSRTKSTGRRAKGGCWSWIYPKYHERDE 281
BLAST of PI0021839 vs. ExPASy TrEMBL
Match:
A0A5A7V1Z3 (Putative serine/threonine-protein kinase ndrD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00330 PE=4 SV=1)
HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130
Identity = 253/266 (95.11%), Postives = 258/266 (96.99%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTRFSRPALNHDIFRSWNGKQIHLRDDHP 60
MIG+ RKLLSSPTESPDFRALNTTMEFSSPSPTR SRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1 MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
Query: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
Query: 121 EQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFP 180
EQPMV+GQREDTGVDER+SNLGG REVFSRENRKSRKE R+LVGRSSMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
Query: 181 KSIGTTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
KSIG TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG
Sbjct: 181 KSIG-TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
Query: 241 SIKSSSSSSSNGSNGSNKNRTKSTGR 267
SIKSSSSSS SNGSNK+RTKSTGR
Sbjct: 241 SIKSSSSSS---SNGSNKSRTKSTGR 262
BLAST of PI0021839 vs. ExPASy TrEMBL
Match:
A0A0A0KH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1)
HSP 1 Score: 465.3 bits (1196), Expect = 1.8e-127
Identity = 251/272 (92.28%), Postives = 259/272 (95.22%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTRFSRPALNHDIFRSWNGKQIHLRDDHP 60
MIGSTRKLLSSPTESPDFRALNTTMEFS SPTR SRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1 MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
Query: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
Query: 121 EQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFP 180
EQPMVLGQREDTGVDE++S LGG REVFSRENRKSRKE R+LVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180
Query: 181 KSIGTTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
KSIG TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESES+SYGSNVNNG
Sbjct: 181 KSIG-TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNG 240
Query: 241 SIKSSSSSSSNGSNGSNKNRTKSTGRRANGGC 273
SIKSSSSSS S+GSNKNRTKSTGR ++ C
Sbjct: 241 SIKSSSSSS---SDGSNKNRTKSTGRESSLLC 266
BLAST of PI0021839 vs. ExPASy TrEMBL
Match:
A0A6J1IJ72 (uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911 PE=4 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 8.8e-114
Identity = 229/290 (78.97%), Postives = 249/290 (85.86%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTR---FSRPALNHDIFRSWNGKQIHLRD 60
M+GS+RKLLSSPTESPDFRA + M+F SP+ TR SRPALNHDIFRSWNGKQIHL+D
Sbjct: 1 MLGSSRKLLSSPTESPDFRAFD-AMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60
Query: 61 DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120
D EYGFRL+SPQRSPQFYRSNY +LSPPSK+LAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61 DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLR 120
Query: 121 DLVEQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSS--MENEGLYL 180
DLVEQPMVLGQ+E TG +ER+ GG REVF+ ENRKS+KE LVGRSS MEN GLYL
Sbjct: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFATENRKSKKETSGLVGRSSWNMENGGLYL 180
Query: 181 KMGFPKSIGTTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGS 240
KMGFP SIGT T +KKKK NDS LN SAKVSPKP VEKDWWKRRLSVSSE+ SV+Y S
Sbjct: 181 KMGFPNSIGTRTKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDS 240
Query: 241 NVNNGSIKSSSSSSSNGSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 286
VNNGSIKSSSSSSSNGSNGSNKNRTKS+GR ANGGCWS IYPK +ERDE
Sbjct: 241 IVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHANGGCWSCIYPKCNERDE 287
BLAST of PI0021839 vs. ExPASy TrEMBL
Match:
A0A6J1F9W6 (uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC111443607 PE=4 SV=1)
HSP 1 Score: 414.1 bits (1063), Expect = 4.8e-112
Identity = 229/291 (78.69%), Postives = 250/291 (85.91%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTR---FSRPALNHDIFRSWNGKQIHLRD 60
M+GS+RKLLSSPTESPDFRA + M+F SP+ TR SRPALNHDIFRSWNGKQIHL+D
Sbjct: 1 MLGSSRKLLSSPTESPDFRAFD-AMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60
Query: 61 DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120
D EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61 DEAVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120
Query: 121 DLVEQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSS--MENEGLYL 180
DLVEQPMVLGQ+E TG +ER+ GG REVF+ ENRKS+KE +LVGRSS MEN GLYL
Sbjct: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSKKETSALVGRSSWNMENGGLYL 180
Query: 181 KMGFPKSIGTTTTRKKKKK-NDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYG 240
KMGFP SIGT T +KKKKK NDS LN SAKVSPKP VEKDWWKRRLSVSSE+ SV+Y
Sbjct: 181 KMGFPNSIGTRTKKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYD 240
Query: 241 SNVNNGSIKSSSSSSSNGSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 286
S+VNNGSIKSSSSSSSNGSNGSNKNRTKS+GR A GCWS IYPK +ERDE
Sbjct: 241 SSVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHAYRGCWSCIYPKCNERDE 288
BLAST of PI0021839 vs. NCBI nr
Match:
XP_008466690.1 (PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo] >XP_016903625.1 PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo])
HSP 1 Score: 519.6 bits (1337), Expect = 1.7e-143
Identity = 271/285 (95.09%), Postives = 276/285 (96.84%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTRFSRPALNHDIFRSWNGKQIHLRDDHP 60
MIG+ RKLLSSPTESPDFRALNTTMEFSSPSPTR SRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1 MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
Query: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
Query: 121 EQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFP 180
EQPMV+GQREDTGVDER+SNLGG REVFSRENRKSRKE R+LVGRSSMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
Query: 181 KSIGTTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
KSIG TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG
Sbjct: 181 KSIG-TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
Query: 241 SIKSSSSSSSNGSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 286
SIKSSSSSS SNGSNK+RTKSTGRRA GGCWSWIYPKYHERDE
Sbjct: 241 SIKSSSSSS---SNGSNKSRTKSTGRRAKGGCWSWIYPKYHERDE 281
BLAST of PI0021839 vs. NCBI nr
Match:
XP_004146783.1 (uncharacterized protein LOC101215856 [Cucumis sativus] >KGN47988.2 hypothetical protein Csa_004242 [Cucumis sativus])
HSP 1 Score: 511.1 bits (1315), Expect = 6.0e-141
Identity = 269/285 (94.39%), Postives = 275/285 (96.49%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTRFSRPALNHDIFRSWNGKQIHLRDDHP 60
MIGSTRKLLSSPTESPDFRALNTTMEFS SPTR SRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1 MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
Query: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
Query: 121 EQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFP 180
EQPMVLGQREDTGVDE++S LGG REVFSRENRKSRKE R+LVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180
Query: 181 KSIGTTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
KSIG TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESES+SYGSNVNNG
Sbjct: 181 KSIG-TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNG 240
Query: 241 SIKSSSSSSSNGSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 286
SIKSSSSSS S+GSNKNRTKSTGRRANGGCWSWIYPKYHERDE
Sbjct: 241 SIKSSSSSS---SDGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 279
BLAST of PI0021839 vs. NCBI nr
Match:
KAA0059829.1 (putative serine/threonine-protein kinase ndrD [Cucumis melo var. makuwa] >TYK24788.1 putative serine/threonine-protein kinase ndrD [Cucumis melo var. makuwa])
HSP 1 Score: 475.7 bits (1223), Expect = 2.8e-130
Identity = 253/266 (95.11%), Postives = 258/266 (96.99%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTRFSRPALNHDIFRSWNGKQIHLRDDHP 60
MIG+ RKLLSSPTESPDFRALNTTMEFSSPSPTR SRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1 MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
Query: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61 FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
Query: 121 EQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFP 180
EQPMV+GQREDTGVDER+SNLGG REVFSRENRKSRKE R+LVGRSSMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
Query: 181 KSIGTTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
KSIG TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG
Sbjct: 181 KSIG-TTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNG 240
Query: 241 SIKSSSSSSSNGSNGSNKNRTKSTGR 267
SIKSSSSSS SNGSNK+RTKSTGR
Sbjct: 241 SIKSSSSSS---SNGSNKSRTKSTGR 262
BLAST of PI0021839 vs. NCBI nr
Match:
XP_038883973.1 (uncharacterized protein LOC120074937 [Benincasa hispida])
HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-123
Identity = 246/290 (84.83%), Postives = 263/290 (90.69%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFS--SPSPTRFSRPALNHDIFRSWNGKQIHLRDD 60
MIGS+RKLL+SPTESPDFRA N MEF+ SPSPTR SRPALNHDIFRSWNGKQIHLRDD
Sbjct: 1 MIGSSRKLLASPTESPDFRAFN-AMEFASPSPSPTRSSRPALNHDIFRSWNGKQIHLRDD 60
Query: 61 HPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRD 120
P EYGFRLTSPQRSPQFYRSNY +LSPPSKALAIATGQ+ELME+VNNMPESCYELSLRD
Sbjct: 61 PPLEYGFRLTSPQRSPQFYRSNYQSLSPPSKALAIATGQRELMEMVNNMPESCYELSLRD 120
Query: 121 LVEQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMG 180
LVEQPM LG+RE+ GV+ER+ NLGG REVFSRENRKS+KE R+LVG+ SMEN GLYLKMG
Sbjct: 121 LVEQPMGLGEREEAGVNERDCNLGGDREVFSRENRKSKKETRALVGK-SMENGGLYLKMG 180
Query: 181 FPKSIGTTTTRKKKK--KNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSN 240
PKSI TTTT+KKKK KNDS LNMSAKVSPKPPQLVEKDWWKRRLSVSSESES +YGS
Sbjct: 181 LPKSIVTTTTKKKKKKNKNDSGLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESFAYGSC 240
Query: 241 VNNGSIKSSSSSSSNGSNGSNKNRTKSTGRRAN-GGCWSWIYPKYHERDE 286
+NNGSIKSSSSSSSNGSNGSN NRTK+TGR AN GGCWSWIYPKYHE DE
Sbjct: 241 INNGSIKSSSSSSSNGSNGSN-NRTKATGRHANSGGCWSWIYPKYHEGDE 287
BLAST of PI0021839 vs. NCBI nr
Match:
XP_023536601.1 (uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 421.0 bits (1081), Expect = 8.1e-114
Identity = 231/291 (79.38%), Postives = 251/291 (86.25%), Query Frame = 0
Query: 1 MIGSTRKLLSSPTESPDFRALNTTMEFSSPSPTR---FSRPALNHDIFRSWNGKQIHLRD 60
M+GS+RKLLSSPTESPDFRA + M+F SP+ TR SRPALNHDIFRSWNGKQIHL+D
Sbjct: 1 MLGSSRKLLSSPTESPDFRAFD-AMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60
Query: 61 DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120
D EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61 DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120
Query: 121 DLVEQPMVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSS--MENEGLYL 180
DLVEQPMVLGQ+E TG +ER+ GG REVF+ ENRKSRKE +LVGRSS MEN GLYL
Sbjct: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSRKETSALVGRSSWNMENGGLYL 180
Query: 181 KMGFPKSIGTTTTRKKK-KKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYG 240
KMGFP SIGT T +KKK NDS LN SAKVSPKP VEKDWWKRRLSVSSE+ SV+Y
Sbjct: 181 KMGFPNSIGTRTKKKKKNNNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYD 240
Query: 241 SNVNNGSIKSSSSSSSNGSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 286
S+VNNGSIKSSSSSSSNGSNGSNKNRTKS+GR ANGGCWS IYPKY+ERDE
Sbjct: 241 SSVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHANGGCWSCIYPKYNERDE 288
BLAST of PI0021839 vs. TAIR 10
Match:
AT1G76980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 111.7 bits (278), Expect = 9.8e-25
Identity = 89/228 (39.04%), Postives = 125/228 (54.82%), Query Frame = 0
Query: 68 TSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLG 127
TSP +SP +NY LSP +KA IA GQ+ELM++V+ MPESCYELSL+DLVE +
Sbjct: 37 TSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE----VN 96
Query: 128 QREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFPKSIGT-T 187
E+ DE R+V + +P + + N G LK+ FP S+G
Sbjct: 97 TEEEKVFDEMPQREKKPRKVVRKTKSDKWVDP---IRNGGVNNSGFLLKLVFPVSLGAKK 156
Query: 188 TTRKKKKKNDSSLNMSAK----VSPKPP------QLVEKDWWKRRLSVSSESESVSYGSN 247
T KKK +D ++++K SP+P + +KDWWK LS S S+SV S
Sbjct: 157 KTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKDWWKDGLSESRRSQSVV--SR 216
Query: 248 VNNGSIKSSSSSSSNGSNGSNKNRTKSTGRRANGGCWSWIYPKYHERD 285
+N+GS KSS SSS SN +R++++ R N GC S+++ H RD
Sbjct: 217 INSGSSKSSGGSSSR----SNSDRSRNSLRDENRGCLSFLW-NVHPRD 250
BLAST of PI0021839 vs. TAIR 10
Match:
AT1G76980.1 (BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). )
HSP 1 Score: 100.1 bits (248), Expect = 3.0e-21
Identity = 81/213 (38.03%), Postives = 114/213 (53.52%), Query Frame = 0
Query: 68 TSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLG 127
TSP +SP +NY LSP +KA IA GQ+ELM++V+ MPESCYELSL+DLVE +
Sbjct: 37 TSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE----VN 96
Query: 128 QREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFPKSIGT-T 187
E+ DE R+V + +P + + N G LK+ FP S+G
Sbjct: 97 TEEEKVFDEMPQREKKPRKVVRKTKSDKWVDP---IRNGGVNNSGFLLKLVFPVSLGAKK 156
Query: 188 TTRKKKKKNDSSLNMSAK----VSPKPP------QLVEKDWWKRRLSVSSESESVSYGSN 247
T KKK +D ++++K SP+P + +KDWWK LS S S+SV S
Sbjct: 157 KTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKDWWKDGLSESRRSQSVV--SR 216
Query: 248 VNNGSIKSSSSSSSNGSNGSNKNRTKSTGRRAN 270
+N+GS KSS SSS ++ ++N + AN
Sbjct: 217 INSGSSKSSGGSSSRSNSDRSRNSLRYPQTLAN 240
BLAST of PI0021839 vs. TAIR 10
Match:
AT1G21390.1 (embryo defective 2170 )
HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 76/189 (40.21%), Postives = 107/189 (56.61%), Query Frame = 0
Query: 65 FRLTSPQRSPQFYR-SNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQP 124
+R + P+ P F+R +Y +LSP SKA AIA GQ+ELME+V+ MPESCYELSL+DLVE
Sbjct: 35 WRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPESCYELSLKDLVE-V 94
Query: 125 MVLGQREDTGVDERESNLGGGREVFSRENRKSRKEPRSLVGRSSMENEGLYLKMGFPKSI 184
V + E DE +V + R +P G + N G LK+ F S+
Sbjct: 95 KVNQENERKVFDELPKRANRQSKVVRKTKSDKRVDPNRSGGGN---NSGFLLKIMFLVSL 154
Query: 185 GT---TTTRKKKKKNDSSLNMSAK--VSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVN 244
G TT +KKKKK D + +S + +S + ++ +K+WW R SES + GS+ +
Sbjct: 155 GAMKDTTKKKKKKKKDEACKVSPRPSISEETVKVEDKEWWNR----MSESSTKRSGSSSS 214
Query: 245 NGSIKSSSS 248
N SI+S SS
Sbjct: 215 NNSIRSRSS 215
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S4E6L8 | 8.1e-144 | 95.09 | uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=... | [more] |
A0A5A7V1Z3 | 1.3e-130 | 95.11 | Putative serine/threonine-protein kinase ndrD OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A0A0KH64 | 1.8e-127 | 92.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1 | [more] |
A0A6J1IJ72 | 8.8e-114 | 78.97 | uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911... | [more] |
A0A6J1F9W6 | 4.8e-112 | 78.69 | uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC1114436... | [more] |
Match Name | E-value | Identity | Description | |
XP_008466690.1 | 1.7e-143 | 95.09 | PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo] >XP_016903625.1 P... | [more] |
XP_004146783.1 | 6.0e-141 | 94.39 | uncharacterized protein LOC101215856 [Cucumis sativus] >KGN47988.2 hypothetical ... | [more] |
KAA0059829.1 | 2.8e-130 | 95.11 | putative serine/threonine-protein kinase ndrD [Cucumis melo var. makuwa] >TYK247... | [more] |
XP_038883973.1 | 1.5e-123 | 84.83 | uncharacterized protein LOC120074937 [Benincasa hispida] | [more] |
XP_023536601.1 | 8.1e-114 | 79.38 | uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT1G76980.2 | 9.8e-25 | 39.04 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT1G76980.1 | 3.0e-21 | 38.03 | BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G2139... | [more] |
AT1G21390.1 | 1.1e-20 | 40.21 | embryo defective 2170 | [more] |