PI0021769 (gene) Melon (PI 482460) v1

Overview
NamePI0021769
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 8053550 .. 8053879 (-)
RNA-Seq ExpressionPI0021769
SyntenyPI0021769
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTTCCATCTCTTTTTGGAAGGACTTCTGGCTCAATTGTGGTACTCTATCCTCTGCTTTCCCTCGCCTTTTTTGTTTGGCTCGCTATCCGGATATTAGGGTGGCTGATGTTTGGGTGGAGGATGCTGCTGCTTGGGATTTGCATCTTCGCCACAATCTCAATGATTCTGAAATGATCGAATGGATGGCCTTATCACAGCATTTACAGTCTGTCAATTTTCATGCTGCTGCTGATTCTTGGATTTGGACGATCAACCCCTCATCTTTCTTCTCTGTCAAGTCTCTTATGGATGATTTGGTGGGAGCTGATAATATCCATGTTGTGA

mRNA sequence

ATGATTCTTCCATCTCTTTTTGGAAGGACTTCTGGCTCAATTGTGGTACTCTATCCTCTGCTTTCCCTCGCCTTTTTTGTTTGGCTCGCTATCCGGATATTAGGGTGGCTGATGTTTGGGTGGAGGATGCTGCTCATTTACAGTCTGTCAATTTTCATGCTGCTGCTGATTCTTGGATTTGGACGATCAACCCCTCATCTTTCTTCTCTGTCAAGTCTCTTATGGATGATTTGGTGGGAGCTGATAATATCCATGTTGTGA

Coding sequence (CDS)

ATGATTCTTCCATCTCTTTTTGGAAGGACTTCTGGCTCAATTGTGGTACTCTATCCTCTGCTTTCCCTCGCCTTTTTTGTTTGGCTCGCTATCCGGATATTAGGGTGGCTGATGTTTGGGTGGAGGATGCTGCTCATTTACAGTCTGTCAATTTTCATGCTGCTGCTGATTCTTGGATTTGGACGATCAACCCCTCATCTTTCTTCTCTGTCAAGTCTCTTATGGATGATTTGGTGGGAGCTGATAATATCCATGTTGTGA

Protein sequence

MILPSLFGRTSGSIVVLYPLLSLAFFVWLAIRILGWLMFGWRMLLIYSLSIFMLLLILGFGRSTPHLSSLSSLLWMIWWELIISML
Homology
[Close]
BLAST of PI0021769 vs. ExPASy TrEMBL
Match: A0A0A0LC89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239300 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 71/109 (65.14%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 1   MILPSLFGRTSGSIVVLYPLLSLAFFVWLAIRILGWLMFGWRMLL--------------- 60
           MILPSLFGRTS SIVVLY LLS AFFVWL I+ILGWLMFGWRMLL               
Sbjct: 1   MILPSLFGRTSSSIVVLYHLLSPAFFVWLTIQILGWLMFGWRMLLLGICTFAAISMIPKL 60

Query: 61  --------IYSLSIFMLLLILGFGRSTPHLSSLSSLLWMIWWELIISML 87
                   IYSLSIF+L+LI G+GRS PHL SLS+LL MIWWEL+I+ML
Sbjct: 61  SIGWPYHNIYSLSIFVLMLIFGYGRSNPHLPSLSNLLTMIWWELVIAML 109

[Close]
BLAST of PI0021769 vs. NCBI nr
Match: KGN57666.1 (hypothetical protein Csa_009495 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-23
Identity = 71/109 (65.14%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 1   MILPSLFGRTSGSIVVLYPLLSLAFFVWLAIRILGWLMFGWRMLL--------------- 60
           MILPSLFGRTS SIVVLY LLS AFFVWL I+ILGWLMFGWRMLL               
Sbjct: 1   MILPSLFGRTSSSIVVLYHLLSPAFFVWLTIQILGWLMFGWRMLLLGICTFAAISMIPKL 60

Query: 61  --------IYSLSIFMLLLILGFGRSTPHLSSLSSLLWMIWWELIISML 87
                   IYSLSIF+L+LI G+GRS PHL SLS+LL MIWWEL+I+ML
Sbjct: 61  SIGWPYHNIYSLSIFVLMLIFGYGRSNPHLPSLSNLLTMIWWELVIAML 109

The following BLAST results are available for this feature:
BLAST of PI0021769 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021769 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC891.3e-2365.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239300 PE=4 SV=1[more]
BLAST of PI0021769 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57666.12.6e-2365.14hypothetical protein Csa_009495 [Cucumis sativus][more]
BLAST of PI0021769 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021769.1PI0021769.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane