PI0021730 (gene) Melon (PI 482460) v1

Overview
NamePI0021730
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 20611564 .. 20615043 (+)
RNA-Seq ExpressionPI0021730
SyntenyPI0021730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCTTACAGCCAATCACAAGTTGAGGAAAAGGGGGGCCCACAAACCCACTCGATTGACTGTCCTGTCCTCTTCATTTCGTCCTTTGCCTCTCCTTCCGCTCCTTAATTTGGAGGTCTACATTTTTCATAATACTGTCCCAAACCCCTTCTTTTTTTCTCTCTCTCATCACCGGCGGTGCGGCGATGGCGGCGGTAGTAGTGGTGGAGGAATTATCTAATTGGTGACTTTTCCAGACGCGTATTTCAAAAGAAGAAAAAGTGTGGTTAAAAGATGTCAGGATTGGTTTTTACTTTTGATGGCGTGTGAAATGAGTATATCTATGGGATGTAGTAGCAAAACCCTATTTCTCTTTCCAATTCCCAGTTTCTGCTGCCGTCCACGATGGAAAGAAATTTTCTTTTTACTAGAAAACGAAAGGTTGCACAGGAGGTGTTCGATGAAATGTCTGACAAAAGGAAAAAAAAATGGTAAAATTATGGGGAGGGTTAAAAAAATGGTTTTTTTTTGTGGATTCCATAAATGGGTGGCCTTTAAGGTGATAGATCTGACGAGTTAATGGGAAATTGTTGATGGGTTTTGTTTTGTTTTGTTGGGTTCGAAATTTGAATGAATGAATGATGGTGAGTGTGTAAGGAGATGTAGAGGAAGAGAGAGCAAAAGGGCAGGAGAGTGACAGAAGAGAGTGAGCACACGCTGCAGCCAAATGTATGAAAGGCATACCTTTGCGGGTGCGTGCTCACTTCTCTTTCTGTCAGCTTCCCCGTAATTTTCCCTTCTGCTCTCTTCTTCTCTCTCTCTATCGTTCTTTTTTTTCTTTCCCTCTGGTTCATACTGTCAGAAAGGCCAGATGTCCATCGGCTATCGCTCCGTTTCTCTTCCTAGAGTACCCTCTTCCTTTTTTGCCTCCTCTAACGGACAAATGGAACAATGAGACTGGTGAAGTTGAAGCGGCCTCTTTGAAGTTTCAAGCGTTGCCACTGTAGTGTACAATTTCGCCTTTCACACTCTTAAATTTGTCTGTTTGTTCTCATCCTTTACCATATTTATTAATATATTTATATATTCTTTGGCTATTGCAATTTTCCATAGAAATTAGAAAACCCTTTTCTTTTTCTTTTCCTTAACATTGATTTCCATGGAAACTTAGTAGCGCGACTTTTGATGGTCCTCTCCTGCTTATATATGGAATTTTTGAAGGTACAAAACCAATTACTGTTCATTATTTAACGGAAAATCCTTCGGAAAATCGTTATTGTTTAGTGCAAAACCCTGATTACTGTTCCCATCTAAACCATAAACTCCCGGCTATGTTTTGGGGTTTCTTTTGGCGTAGGCGTATAGGACACGCTCTGTGTTTTTATTTTTCATATTTATTTATTTTGATTTCCTGAGATTTGGGTTATTCCATATCTGACAAAATATTTCTTTCACTCTTGAGAATATTGGAATCTGCGGAAATATTTATGCAGGCATTATTTTTCGTTGCTGAAGAGTTATACAGATTTGTTTTGGTATTTACTTTCCTTAAACGAAAAAATTCTTGCCGTTGTGGGGTACTACTTGGAGAAGGGTGTGACTCAAGTGCTGAATATGGCAACAATCTCTCGTTTTGGATGCCTGAAGGGCCTGCTATTTTCTAGTCCCAGATATGGAGTTTCCAATCCGGAAAATTTCCCCATTCAGGTTACTGATTTATTCGATAAGAAGATATTCCTGTATTTTTGTTCTCTTGTTCCAAAATCATCACCATCTTCTTCTCTCTGGTTATTTATTCTAGTGGTAGCTAATTAGGGCTTGAATATTGCTTTTCTCAGCACTTGTTTGACGTTGGGAGGCAACAGATTGCTTATTTTTCTCTTCACTTCAGATTAACTATCACCACCGCCACCATCATTGTCCACTATAGAGGTAATAACTTTTTCCTGTTGTTTTTCTCTTTTTTCTATTGATTTTAACTTGTAGAATTTGATAAAACTGCATTCTTGTGATTTTTGTTCGTTTTGTTACTTGATTCTCCTTTCCCATTTATACTTGGTCTTGTTCATTGAACCCGCACAATGTTTTTTCTTTAACATGATCTTATATATGGGTTAATTTTACCGTGTGGATGTAGCTTTGATGCTCTTTTAGATCATGTGATGGTTAGTTTGCTCTTTTTTTAATGCTCTAATCTTCATTATGATACTTTACGTTTTTATATGTGTGAAATTTTGTGTTACTTTGGGGGTTTCAGTTAGACATTTAAATGCTGAAGTTTCTAAATCAATTTGTTTCTGAGTGGTTTAAGAAAATTAGTAGCTAAGAAAGGTTTTCCCCCTTGTGAAGTTTGCCTTTCTGATTAAAGCTGCCAACAGCGAAAAGACGAAATTATTTTGTTGACAAAAATAATGTGGTTTAGCAAATTGGAAGTTTTACAATATTTTTCATTTGATTAAAGGAAGCCATGGCCGTGTTTTTCATCTTGAAAGTGATAAAATTTCCGCATGTGAAAATTTGATAATCATCATAATCAAATTTGTTAAATTTCTATCAACGCAGTGCACATTTACAGTAGTGTCACCGTATGTAGAGAAGAAATTTAAGCAATAGGCGACAGCCTACTAAATACATTCTTTTTCTTAGGAAATGGCAAATTTTGAACATTCATGTCTTTACCTTTTTATTTTTAATTTTTATGTGGTCATGATTAAGATAAAAATCACACCCTACTATATGTCTTGCTCTTTTTAGATGTTAATGTGTTAAAAACAAGGATTAAAATATCCATGGATATGTCGTTATATCCGTGGATATATCCGTAAGTCCAAGGGTTCGATATCGATATTAAATGTCCATGGATATATCCAACGTCTTTTATAAATGCTCGTAAAAGACAATATGTCATCTATTTAGTCTAATATGATAAATACTAATAACTATATTCATGACCTAGTTTTGGAGTAAATACAAACTTAATTATTAATCTAAATAAATTTTATAAATTTTGTCTTTTAGAAATATTTGTCGATATCGATATTTTATCGACATATCCGTCGATATATCTATGAAATTGAAATCTCGATATCGACATCGACATTGATATTTTAATCCTTGGTTAAAAATGGTAAATATGTCAAATTGTAATGTTTTGAACAGTTCATCGACACATTCTTTTTATCAGCGCATGAGCTGAAATCTGTCAAGAAATTAAAGAAGTACTTGCCACTAGACTTAAAAGCTCAAGTCCTGACAATGTTTTTTACTATAAGATTTTACAACTTAAGGTTACACATGAAATGACACAAAAAATACTCCAAGCTTTTGAAGCCTGGAGCTATAGGGATTTTAAACAGTGGTTGAAACATTATTCTCCCTTTTTAGGACTTTTTTTTTCCTCAGTACTTTTGGATGAAGTATCGCAGGCATTCATTTCTCTTGTTATCCAGCAGTTTTTTGCTGTAAGAACAAAGAGTTTTGTCATATAAGGATGTGTTGA

mRNA sequence

ATGTTGCTTACAGCCAATCACAAGTTGAGGAAAAGGGGGGCCCACAAACCCACTCGATTGACTGTCCTGTCCTCTTCATTTCGTCCTTTGCCTCTCCTTCCGCTCCTTAATTTGGAGGTCTACATTTTTCATAATACTGTCCCAAACCCCTTCTTTTTTTCTCTCTCTCATCACCGGCGGAAGAGAGAGCAAAAGGGCAGGAGAGTGACAGAAGAGAGTGAGCACACGCTGCAGCCAAATAAAGGCCAGATGTCCATCGGCTATCGCTCCGTTTCTCTTCCTAGAAAGGGTGTGACTCAAGTGCTGAATATGGCAACAATCTCTCGTTTTGGATGCCTGAAGGGCCTGCTATTTTCTAGTCCCAGATATGGAGTTTCCAATCCGGAAAATTTCCCCATTCAGCACTTGTTTGACGTTGGGAGGCAACAGATTGCTTATTTTTCTCTTCACTTCAGATTAACTATCACCACCGCCACCATCATTGTCCACTATAGAGGCATTCATTTCTCTTGTTATCCAGCAGTTTTTTGCTGTAAGAACAAAGAGTTTTGTCATATAAGGATGTGTTGA

Coding sequence (CDS)

ATGTTGCTTACAGCCAATCACAAGTTGAGGAAAAGGGGGGCCCACAAACCCACTCGATTGACTGTCCTGTCCTCTTCATTTCGTCCTTTGCCTCTCCTTCCGCTCCTTAATTTGGAGGTCTACATTTTTCATAATACTGTCCCAAACCCCTTCTTTTTTTCTCTCTCTCATCACCGGCGGAAGAGAGAGCAAAAGGGCAGGAGAGTGACAGAAGAGAGTGAGCACACGCTGCAGCCAAATAAAGGCCAGATGTCCATCGGCTATCGCTCCGTTTCTCTTCCTAGAAAGGGTGTGACTCAAGTGCTGAATATGGCAACAATCTCTCGTTTTGGATGCCTGAAGGGCCTGCTATTTTCTAGTCCCAGATATGGAGTTTCCAATCCGGAAAATTTCCCCATTCAGCACTTGTTTGACGTTGGGAGGCAACAGATTGCTTATTTTTCTCTTCACTTCAGATTAACTATCACCACCGCCACCATCATTGTCCACTATAGAGGCATTCATTTCTCTTGTTATCCAGCAGTTTTTTGCTGTAAGAACAAAGAGTTTTGTCATATAAGGATGTGTTGA

Protein sequence

MLLTANHKLRKRGAHKPTRLTVLSSSFRPLPLLPLLNLEVYIFHNTVPNPFFFSLSHHRRKREQKGRRVTEESEHTLQPNKGQMSIGYRSVSLPRKGVTQVLNMATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAYFSLHFRLTITTATIIVHYRGIHFSCYPAVFCCKNKEFCHIRMC
Homology
[Close]
BLAST of PI0021730 vs. ExPASy TrEMBL
Match: A0A0A0LW76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269860 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 9.7e-61
Identity = 144/220 (65.45%), Postives = 150/220 (68.18%), Query Frame = 0 

Query: 1   MLLTANHKLRKRGAHKPTR---LTVLSSSFRPLPLLPLLNLEVYIF-HNTVPNPFFFSLS 60
           M L ANHKLRK+G    T      VL  S   L    LLN  +  F HN  PNPFF S+S
Sbjct: 1   MWLRANHKLRKKGGAPQTHSIDCPVLYLSSFCLSFRSLLNFALSTFYHNNAPNPFFSSVS 60

Query: 61  ----------HHRRKREQKGRRVTEESEHTLQPNKGQMSIGYRSVSLPR----KGVTQVL 120
                        RKREQKGRRVTEESEHTLQPNKGQMSIGYRSVSLPR    KGVTQVL
Sbjct: 61  LFTGGAEMAAEMERKREQKGRRVTEESEHTLQPNKGQMSIGYRSVSLPRVPSSKGVTQVL 120

Query: 121 NMATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAYFSLHFRLTITTATIIV 180
           NMATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAY SLHFRLTIT AT IV
Sbjct: 121 NMATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAYVSLHFRLTITIATPIV 180

Query: 181 HYRGI-------------HFSCYPAVFCCKNKEFCHIRMC 190
            YRG               F    ++FCCKNKEFCH+ MC
Sbjct: 181 RYRGFVSLQYFCMKYRKHSFLLLSSIFCCKNKEFCHM-MC 219

[Close]
BLAST of PI0021730 vs. NCBI nr
Match: KAE8653049.1 (hypothetical protein Csa_020128 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 5.2e-24
Identity = 59/63 (93.65%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 104 MATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAYFSLHFRLTITTATIIVH 163
           MATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAY SLHFRLTIT AT IV 
Sbjct: 1   MATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAYVSLHFRLTITIATPIVR 60

Query: 164 YRG 167
           YRG
Sbjct: 61  YRG 63

[Close]
BLAST of PI0021730 vs. NCBI nr
Match: KAG6587833.1 (hypothetical protein SDJN03_16398, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-17
Identity = 50/65 (76.92%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 104 MATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAYFSLHFRLTITTATIIVH 163
           MATISRFGCLK L FSSPRYG S PENFPIQHL DVGRQQ AYFSLHFR  I T T  V 
Sbjct: 1   MATISRFGCLKVLPFSSPRYGASKPENFPIQHLLDVGRQQPAYFSLHFRFAIITTTPTVR 60

Query: 164 YRGIH 169
            R IH
Sbjct: 61  LRVIH 65

[Close]
BLAST of PI0021730 vs. NCBI nr
Match: KAG7035673.1 (AP2/ERF and B3 domain-containing transcription factor [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-17
Identity = 50/65 (76.92%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 104 MATISRFGCLKGLLFSSPRYGVSNPENFPIQHLFDVGRQQIAYFSLHFRLTITTATIIVH 163
           MATISRFGCLK L FSSPRYG S PENFPIQHL DVGRQQ AYFSLHFR  I T T  V 
Sbjct: 1   MATISRFGCLKVLPFSSPRYGASKPENFPIQHLLDVGRQQPAYFSLHFRFAIITTTPTVR 60

Query: 164 YRGIH 169
            R IH
Sbjct: 61  LRVIH 65

The following BLAST results are available for this feature:
BLAST of PI0021730 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW769.7e-6165.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269860 PE=4 SV=1[more]
BLAST of PI0021730 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653049.15.2e-2493.65hypothetical protein Csa_020128 [Cucumis sativus][more]
KAG6587833.11.6e-1776.92hypothetical protein SDJN03_16398, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035673.11.6e-1776.92AP2/ERF and B3 domain-containing transcription factor [Cucurbita argyrosperma su... [more]
BLAST of PI0021730 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021730.1PI0021730.1mRNA