PI0021713 (gene) Melon (PI 482460) v1

Overview


Name	PI0021713
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr12: 15951418 .. 15952882 (+)
RNA-Seq Expression	PI0021713
Synteny	PI0021713

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACATTGCTTACTTCTTTTGTACAAGGTGAAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGTAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAACGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAACACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTAACCAACGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAACCCTGCAAACCCCTCCAAGCGAAGAAAAGGTACCATCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGAAAATCTAGAAAACAATGTCTCTTCTTCTTCTTCAAAAGGTAAAACTAAAATTTCTGATTTTTCCCCTTTTGTTCCTAACGCTCCTTTTCCTTCCAGATTGGCCCCTAAAAAGAAAGAAACACCAAAGGAAGAAGAACTGTTGGAGTGTTCAGGAAAGTGCAAATCAACCTACCTCTGCTCGATGCGATCCAACAAGTCCCAAGGTATGCGAAGTTCTTAAAGGAATTATGCACAAACAAAAGGAAAATCAAGGAGAAGGCAACGGTAAGTCATAACGTTTCTGCTTTATTAAAAACTTCAATACCTGCAAAGCAAAACGACCCAGGTATGTTTTCTCTTCCTTGTATTATAGGAAATAGGCAAATTTCAAGTGCCATGTTAGACTTAGGAGCTTCCATCAATGTCATGCCATATTCTGTTTTTAAAGATCTTGAATTGAATAATTTGCAAAAGACAAATGTATGCATTCAACTTGCTGATAGATCTTTTATATCACCGCTAGGAATAGTTGAAGATGTGCTAGTAAAAGTAGACAAACTAATATTTCCTGCGGACTTTTACATTCTTGAAATGAATGATGCATGTATGAAACCTTCCCATTCAATTCTTCTAGGTAGACCTTTCCTTAAGACTGCTAAAGCTATCATAGATGTAGATAAAGGTTGCCTAAGTGTAGAATTTGATGGAGACATAGTGACATTTAACATTTTTGAATCTATGAAATTTCCTGAAGAATGCTTCTCTGTATGCTCCTTGCAATTGCATGAAAATTTTGAACAAATACCTATAATAGAACAATTTGCTAATCTAAACTTGGAAGAAATTGAAGAAGACATTTGTTTGCATGAACTTAATAAAGAGGAAGAAATTGTAGAAGTAGAAAATAATGAAGAAATAGACCTTGAAGGAATAGATCCTAACTCAATTTCTTTTTCTCCACAGGAACCAGGGATCGAGCTTAA

mRNA sequence

ATGACTACATTGCTTACTTCTTTTGTACAAGGTGAAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGTAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAACGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAACACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTAACCAACGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAACCCTGCAAACCCCTCCAAGCGAAGAAAAGGTACCATCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGAAAATCTAGAAAACAATGTCTCTTCTTCTTCTTCAAAAGGAACCAGGGATCGAGCTTAA

Coding sequence (CDS)

ATGACTACATTGCTTACTTCTTTTGTACAAGGTGAAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGTAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAATGACGCCCAACGACCCGCACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAACACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTAACCAACGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAACCCTGCAAACCCCTCCAAGCGAAGAAAAGGTACCATCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGAAAATCTAGAAAACAATGTCTCTTCTTCTTCTTCAAAAGGAACCAGGGATCGAGCTTAA

Protein sequence

MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNPNLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKTLQTPPSEEKVPSNPILLVDENKKKEENLENNVSSSSSKGTRDRA

Homology

[Close]

BLAST of PI0021713 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.2e-64
Identity = 125/183 (68.31%), Postives = 154/183 (84.15%), Query Frame = 0


Query: 2   TTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNPN 61
           TTLLTSFVQG  +KV KCGVCGL+GH N+KCP+++E+ N++R+YDPH NTYN+GWRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGKG 121
           LRWGND Q+  QA S+S+NQG+NLED++KALATNT+SFQ EMKQQM+QLT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSSK 181
           KLPAQ DHANVSAISLRSGK L TP + E+KV S P+ L  +N+ KEE +E N S S+SK
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

Query: 182 GTR 184
             +
Sbjct: 389 NDK 391

[Close]

BLAST of PI0021713 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.4e-64
Identity = 125/184 (67.93%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+ NTYN+GWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA  +S+NQG+NLED++KALATNT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSS 180
           GKLPAQPD+ANVSAISLRSGK L TP + E+KV S  + L  +N+ KEE +E N+S S+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 KGTR 184
           K  +
Sbjct: 237 KNDK 240

[Close]

BLAST of PI0021713 vs. ExPASy TrEMBL
Match: A0A1S3CQU8 (uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 124/184 (67.39%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 1   MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPH NTYN GWRDNP
Sbjct: 56  MTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNP 115

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA  +S+NQG+NLED++KALATNT+SFQ +MKQQM+QLT  ISK++GK
Sbjct: 116 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKMDGK 175

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSS 180
           GKLPAQPDH NVSAISLRSGK L TP + E+KV S  + L  +N+ KEE +E N SSS+S
Sbjct: 176 GKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSSSNS 235

Query: 181 KGTR 184
           K  +
Sbjct: 236 KNDK 239

[Close]

BLAST of PI0021713 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.0e-63
Identity = 123/184 (66.85%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA S+S+NQG+NLED++KALATNT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSS 180
           GKL AQ ++ANVSA+SLRSGK L TP + E+K  S P+ L  +N+ KEE +E N S  +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 KGTR 184
           K  +
Sbjct: 322 KNDK 325

[Close]

BLAST of PI0021713 vs. ExPASy TrEMBL
Match: A0A5A7VE49 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00600 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.8e-63
Identity = 124/184 (67.39%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+GHPNDK P+++E+ N++R+YDPH NTYN+GWRDNP
Sbjct: 33  MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKYPEVIEDVNIVRRYDPHGNTYNSGWRDNP 92

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 120
            LRWGND Q+  QA S+S+NQG+NLED++KALA NT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 93  KLRWGNDNQKHIQAPSTSSNQGTNLEDIIKALAINTLSFQQEMKQQMTQLTTAISKMDGK 152

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSS 180
           GKLPAQP+HANVSAISLRSGK L TP + E+KV S  + L  +N+ KEEN+E N S S+ 
Sbjct: 153 GKLPAQPNHANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEENVETNPSPSNI 212

Query: 181 KGTR 184
           K  +
Sbjct: 213 KNDK 216

[Close]

BLAST of PI0021713 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 8.6e-64
Identity = 125/183 (68.31%), Postives = 154/183 (84.15%), Query Frame = 0


Query: 2   TTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNPN 61
           TTLLTSFVQG  +KV KCGVCGL+GH N+KCP+++E+ N++R+YDPH NTYN+GWRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGKG 121
           LRWGND Q+  QA S+S+NQG+NLED++KALATNT+SFQ EMKQQM+QLT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSSK 181
           KLPAQ DHANVSAISLRSGK L TP + E+KV S P+ L  +N+ KEE +E N S S+SK
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

Query: 182 GTR 184
             +
Sbjct: 389 NDK 391

[Close]

BLAST of PI0021713 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 253.8 bits (647), Expect = 1.1e-63
Identity = 125/184 (67.93%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+ NTYN+GWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA  +S+NQG+NLED++KALATNT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSS 180
           GKLPAQPD+ANVSAISLRSGK L TP + E+KV S  + L  +N+ KEE +E N+S S+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 KGTR 184
           K  +
Sbjct: 237 KNDK 240

[Close]

BLAST of PI0021713 vs. NCBI nr
Match: XP_008465649.1 (PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 3.3e-63
Identity = 124/184 (67.39%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 1   MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPH NTYN GWRDNP
Sbjct: 56  MTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNP 115

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA  +S+NQG+NLED++KALATNT+SFQ +MKQQM+QLT  ISK++GK
Sbjct: 116 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKMDGK 175

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSS 180
           GKLPAQPDH NVSAISLRSGK L TP + E+KV S  + L  +N+ KEE +E N SSS+S
Sbjct: 176 GKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNSSSSNS 235

Query: 181 KGTR 184
           K  +
Sbjct: 236 KNDK 239

[Close]

BLAST of PI0021713 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62
Identity = 123/184 (66.85%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 120
           NLRWGND Q+  QA S+S+NQG+NLED++KALATNT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSS 180
           GKL AQ ++ANVSA+SLRSGK L TP + E+K  S P+ L  +N+ KEE +E N S  +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 KGTR 184
           K  +
Sbjct: 322 KNDK 325

[Close]

BLAST of PI0021713 vs. NCBI nr
Match: KAA0065554.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.6e-62
Identity = 124/184 (67.39%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 1   MTTLLTSFVQGENVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHVNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGL+GHPNDK P+++E+ N++R+YDPH NTYN+GWRDNP
Sbjct: 33  MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKYPEVIEDVNIVRRYDPHGNTYNSGWRDNP 92

Query: 61  NLRWGNDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTNAISKLEGK 120
            LRWGND Q+  QA S+S+NQG+NLED++KALA NT+SFQ EMKQQM+QLT AISK++GK
Sbjct: 93  KLRWGNDNQKHIQAPSTSSNQGTNLEDIIKALAINTLSFQQEMKQQMTQLTTAISKMDGK 152

Query: 121 GKLPAQPDHANVSAISLRSGKTLQTPPS-EEKVPSNPILLVDENKKKEENLENNVSSSSS 180
           GKLPAQP+HANVSAISLRSGK L TP + E+KV S  + L  +N+ KEEN+E N S S+ 
Sbjct: 153 GKLPAQPNHANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEENVETNPSPSNI 212

Query: 181 KGTR 184
           K  +
Sbjct: 213 KNDK 216

The following BLAST results are available for this feature:

BLAST of PI0021713 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021713 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQ60	4.2e-64	68.31	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
E5GBZ4	5.4e-64	67.93	Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3CQU8	1.6e-63	67.39	uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=...	[more]
A0A5D3CRR8	6.0e-63	66.85	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7VE49	7.8e-63	67.39	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of PI0021713 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067359.1	8.6e-64	68.31	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos...	[more]
ADN33993.1	1.1e-63	67.93	retrotransposon gag protein [Cucumis melo subsp. melo]	[more]
XP_008465649.1	3.3e-63	67.39	PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]	[more]
KAA0047407.1	1.2e-62	66.85	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]
KAA0065554.1	1.6e-62	67.39	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0021713 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021713.1	PI0021713.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding