PI0021698 (gene) Melon (PI 482460) v1

Overview


Name	PI0021698
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Photosystem II reaction center Psb28 protein
Location	chr11: 1146424 .. 1146768 (-)
RNA-Seq Expression	PI0021698
Synteny	PI0021698

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAGCCCAAGATTCAGTTCATCCAGGGCACGGACGAGCAGACAGTGCCGGATGTGCGGCTCACCAAATCCCGAGACGGAACCAACGGAATGGCCATTTTTAGGTTCGATCAGCCGTCGGTGTTCGATTCATCGGCGGAGGTTGGGGATATCACCGGATTCTATATGATTGATGAAGAAGGGGTGATTCAATCGGTTGATGTGAATGCGAAGTTCATCAATGGGAAACCGGCGGGAATTGAGGCGAAGTATGTGATGAGGACTCCGAGGGAATGGGATAGGTTCATGAGATTCATGGAGCGATACTCCAATGCCAATGGCTTGCAATTTGTCAAGAAATGA

mRNA sequence

ATGGTTCAGCCCAAGATTCAGTTCATCCAGGGCACGGACGAGCAGACAGTGCCGGATGTGCGGCTCACCAAATCCCGAGACGGAACCAACGGAATGGCCATTTTTAGGTTCGATCAGCCGTCGGTGTTCGATTCATCGGCGGAGGTTGGGGATATCACCGGATTCTATATGATTGATGAAGAAGGGGTGATTCAATCGGTTGATGTGAATGCGAAGTTCATCAATGGGAAACCGGCGGGAATTGAGGCGAAGTATGTGATGAGGACTCCGAGGGAATGGGATAGGTTCATGAGATTCATGGAGCGATACTCCAATGCCAATGGCTTGCAATTTGTCAAGAAATGA

Coding sequence (CDS)

ATGGTTCAGCCCAAGATTCAGTTCATCCAGGGCACGGACGAGCAGACAGTGCCGGATGTGCGGCTCACCAAATCCCGAGACGGAACCAACGGAATGGCCATTTTTAGGTTCGATCAGCCGTCGGTGTTCGATTCATCGGCGGAGGTTGGGGATATCACCGGATTCTATATGATTGATGAAGAAGGGGTGATTCAATCGGTTGATGTGAATGCGAAGTTCATCAATGGGAAACCGGCGGGAATTGAGGCGAAGTATGTGATGAGGACTCCGAGGGAATGGGATAGGTTCATGAGATTCATGGAGCGATACTCCAATGCCAATGGCTTGCAATTTGTCAAGAAATGA

Protein sequence

MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK

Homology

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BLAST of PI0021698 vs. ExPASy Swiss-Prot
Match: Q0JG75 (Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSB28 PE=2 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 8.8e-54
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 3   QPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDEEG 62
           +P IQFIQGTDEQT+PDVRLTKSRDGTNG+AIF FDQPSVFDSSAE+GDITGFYMID+EG
Sbjct: 69  RPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEG 128

Query: 63  VIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           V+QSVDV+AKF+NGKPA IEAKYVMRTPREWDRFMRFMERYS ANGLQFVKK
Sbjct: 129 VLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVKK 180

[Close]

BLAST of PI0021698 vs. ExPASy Swiss-Prot
Match: Q8W0Y8 (Photosystem II reaction center PSB28 protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSB28 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.9e-50
Identity = 90/114 (78.95%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MV+P +QFIQGTDE T+PDV+LT+SRDG+NGMA+F FDQPSVFDSS EVG+ITG YMIDE
Sbjct: 69  MVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYMIDE 128

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQS DVNA+F+NGKP GI AK++MR+P+EWDRFMRFMERYS+ NGLQFVKK
Sbjct: 129 EGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVKK 182

[Close]

BLAST of PI0021698 vs. ExPASy Swiss-Prot
Match: P49508 (Photosystem II reaction center Psb28 protein OS=Trieres chinensis OX=1514140 GN=psb28 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.1e-35
Identity = 67/113 (59.29%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 2   VQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFD-SSAEVGDITGFYMIDE 61
           ++ KIQFI+G DE+ +PDVRLT+SRDG+ G A FRF  P++ D S+A+ G+ITG Y+ID+
Sbjct: 1   MEAKIQFIKGLDEKVLPDVRLTRSRDGSTGTATFRFKNPNILDKSTAKEGEITGMYLIDQ 60

Query: 62  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVK 114
           EG +++ DVNA+FINGKP  IE+ Y+M++P  WDRFMRFMERY  +NGL F K
Sbjct: 61  EGTLETRDVNAQFINGKPEAIESIYIMKSPEAWDRFMRFMERYGESNGLVFTK 113

[Close]

BLAST of PI0021698 vs. ExPASy Swiss-Prot
Match: A0T0H5 (Photosystem II reaction center Psb28 protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) OX=556484 GN=psb28 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.1e-35
Identity = 65/113 (57.52%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 2   VQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFD-SSAEVGDITGFYMIDE 61
           ++ KIQFI+G DE+ +PDVRLT+S+DG+ G A FRF  P++ D ++A+ G+ITG Y+IDE
Sbjct: 1   MEAKIQFIKGLDEKVLPDVRLTRSKDGSTGTATFRFKNPNILDKTTAKEGEITGMYLIDE 60

Query: 62  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVK 114
           EG++++ DVNA+F+NGKP  IE+ Y+M++P  WDRFMRFMERY   NGL F K
Sbjct: 61  EGILETRDVNARFVNGKPEAIESIYIMKSPEAWDRFMRFMERYGETNGLVFSK 113

[Close]

BLAST of PI0021698 vs. ExPASy Swiss-Prot
Match: O78418 (Photosystem II reaction center Psb28 protein OS=Guillardia theta OX=55529 GN=psb28 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.5e-34
Identity = 67/109 (61.47%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 6   IQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEV-GDITGFYMIDEEGVI 65
           IQFIQG +E  +PDVRLT+SRDG+ G A FRF  P V ++ + V G+ITG Y+IDEEG +
Sbjct: 4   IQFIQGVNEDVIPDVRLTRSRDGSTGTATFRFANPKVLEAQSSVKGNITGMYLIDEEGQL 63

Query: 66  QSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVK 114
            + DVNA+F+NGKP GIEA Y+M++  +WDRFMRFMERYS  NGL F K
Sbjct: 64  VTRDVNARFVNGKPQGIEAVYIMQSKEDWDRFMRFMERYSEDNGLSFTK 112

[Close]

BLAST of PI0021698 vs. ExPASy TrEMBL
Match: A0A5A7TA18 (Photosystem II reaction center Psb28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001560 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.6e-58
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE
Sbjct: 70  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 129

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 130 EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 183

[Close]

BLAST of PI0021698 vs. ExPASy TrEMBL
Match: A0A1S3CCN2 (Photosystem II reaction center Psb28 protein OS=Cucumis melo OX=3656 GN=LOC103498926 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.6e-58
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE
Sbjct: 70  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 129

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 130 EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 183

[Close]

BLAST of PI0021698 vs. ExPASy TrEMBL
Match: A0A6J1KY50 (Photosystem II reaction center Psb28 protein OS=Cucurbita maxima OX=3661 GN=LOC111498173 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.8e-57
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIF+FD+PSVFDSSAEVGDITGFYMIDE
Sbjct: 108 MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFKFDEPSVFDSSAEVGDITGFYMIDE 167

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 168 EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 221

[Close]

BLAST of PI0021698 vs. ExPASy TrEMBL
Match: A0A6J1DWM5 (Photosystem II reaction center Psb28 protein OS=Momordica charantia OX=3673 GN=LOC111024184 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.9e-57
Identity = 111/114 (97.37%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MVQPKIQFIQGTDEQTVPDVRLTKSRDG+NGMAIFRF+QPSVFDSSAEVGDITGFYMIDE
Sbjct: 65  MVQPKIQFIQGTDEQTVPDVRLTKSRDGSNGMAIFRFEQPSVFDSSAEVGDITGFYMIDE 124

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKF+NGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 125 EGVIQSVDVNAKFVNGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 178

[Close]

BLAST of PI0021698 vs. ExPASy TrEMBL
Match: A0A6J1H6H6 (Photosystem II reaction center Psb28 protein OS=Cucurbita moschata OX=3662 GN=LOC111460964 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.1e-57
Identity = 111/114 (97.37%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MV+PKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIF+FD+PSVFDSSAEVGDITGFYMIDE
Sbjct: 69  MVRPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFKFDEPSVFDSSAEVGDITGFYMIDE 128

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 129 EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 182

[Close]

BLAST of PI0021698 vs. NCBI nr
Match: XP_038875127.1 (photosystem II reaction center Psb28 protein [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 7.4e-58
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE
Sbjct: 68  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 127

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 128 EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 181

[Close]

BLAST of PI0021698 vs. NCBI nr
Match: XP_008459971.1 (PREDICTED: photosystem II reaction center PSB28 protein, chloroplastic [Cucumis melo] >KAA0039893.1 photosystem II reaction center PSB28 protein [Cucumis melo var. makuwa] >TYK24609.1 photosystem II reaction center PSB28 protein [Cucumis melo var. makuwa])

HSP 1 Score: 233.8 bits (595), Expect = 7.4e-58
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE
Sbjct: 70  MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 129

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 130 EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 183

[Close]

BLAST of PI0021698 vs. NCBI nr
Match: XP_023005079.1 (photosystem II reaction center PSB28 protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 231.5 bits (589), Expect = 3.7e-57
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIF+FD+PSVFDSSAEVGDITGFYMIDE
Sbjct: 108 MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFKFDEPSVFDSSAEVGDITGFYMIDE 167

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 168 EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 221

[Close]

BLAST of PI0021698 vs. NCBI nr
Match: XP_022157494.1 (photosystem II reaction center Psb28 protein [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 8.1e-57
Identity = 111/114 (97.37%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MVQPKIQFIQGTDEQTVPDVRLTKSRDG+NGMAIFRF+QPSVFDSSAEVGDITGFYMIDE
Sbjct: 65  MVQPKIQFIQGTDEQTVPDVRLTKSRDGSNGMAIFRFEQPSVFDSSAEVGDITGFYMIDE 124

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKF+NGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 125 EGVIQSVDVNAKFVNGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 178

[Close]

BLAST of PI0021698 vs. NCBI nr
Match: XP_023514182.1 (photosystem II reaction center PSB28 protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 111/114 (97.37%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MV+PKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIF+FD+PSVFDSSAEVGDITGFYMIDE
Sbjct: 69  MVRPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFKFDEPSVFDSSAEVGDITGFYMIDE 128

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK
Sbjct: 129 EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 182

[Close]

BLAST of PI0021698 vs. TAIR 10
Match: AT4G28660.1 (photosystem II reaction center PSB28 protein )

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-51
Identity = 90/114 (78.95%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MV+P +QFIQGTDE T+PDV+LT+SRDG+NGMA+F FDQPSVFDSS EVG+ITG YMIDE
Sbjct: 69  MVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYMIDE 128

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQS DVNA+F+NGKP GI AK++MR+P+EWDRFMRFMERYS+ NGLQFVKK
Sbjct: 129 EGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVKK 182

[Close]

BLAST of PI0021698 vs. TAIR 10
Match: AT4G28660.2 (photosystem II reaction center PSB28 protein )

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-51
Identity = 90/114 (78.95%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   MVQPKIQFIQGTDEQTVPDVRLTKSRDGTNGMAIFRFDQPSVFDSSAEVGDITGFYMIDE 60
           MV+P +QFIQGTDE T+PDV+LT+SRDG+NGMA+F FDQPSVFDSS EVG+ITG YMIDE
Sbjct: 84  MVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYMIDE 143

Query: 61  EGVIQSVDVNAKFINGKPAGIEAKYVMRTPREWDRFMRFMERYSNANGLQFVKK 115
           EGVIQS DVNA+F+NGKP GI AK++MR+P+EWDRFMRFMERYS+ NGLQFVKK
Sbjct: 144 EGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVKK 197

The following BLAST results are available for this feature:

BLAST of PI0021698 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0JG75	8.8e-54	89.29	Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subs...	[more]
Q8W0Y8	5.9e-50	78.95	Photosystem II reaction center PSB28 protein, chloroplastic OS=Arabidopsis thali...	[more]
P49508	4.1e-35	59.29	Photosystem II reaction center Psb28 protein OS=Trieres chinensis OX=1514140 GN=...	[more]
A0T0H5	9.1e-35	57.52	Photosystem II reaction center Psb28 protein OS=Phaeodactylum tricornutum (strai...	[more]
O78418	4.5e-34	61.47	Photosystem II reaction center Psb28 protein OS=Guillardia theta OX=55529 GN=psb...	[more]

BLAST of PI0021698 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TA18	3.6e-58	100.00	Photosystem II reaction center Psb28 protein OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CCN2	3.6e-58	100.00	Photosystem II reaction center Psb28 protein OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1KY50	1.8e-57	98.25	Photosystem II reaction center Psb28 protein OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1DWM5	3.9e-57	97.37	Photosystem II reaction center Psb28 protein OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1H6H6	5.1e-57	97.37	Photosystem II reaction center Psb28 protein OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of PI0021698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875127.1	7.4e-58	100.00	photosystem II reaction center Psb28 protein [Benincasa hispida]	[more]
XP_008459971.1	7.4e-58	100.00	PREDICTED: photosystem II reaction center PSB28 protein, chloroplastic [Cucumis ...	[more]
XP_023005079.1	3.7e-57	98.25	photosystem II reaction center PSB28 protein, chloroplastic-like [Cucurbita maxi...	[more]
XP_022157494.1	8.1e-57	97.37	photosystem II reaction center Psb28 protein [Momordica charantia]	[more]
XP_023514182.1	1.1e-56	97.37	photosystem II reaction center PSB28 protein, chloroplastic-like [Cucurbita pepo...	[more]

BLAST of PI0021698 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28660.1	4.2e-51	78.95	photosystem II reaction center PSB28 protein	[more]
AT4G28660.2	4.2e-51	78.95	photosystem II reaction center PSB28 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038676	Photosystem II Psb28, class 1 superfamily	GENE3D	2.40.30.220	Photosystem II Psb28	coord: 4..114 e-value: 3.4E-46 score: 158.1
IPR005610	Photosystem II Psb28, class 1	TIGRFAM	TIGR03047	TIGR03047	coord: 6..112 e-value: 5.2E-46 score: 153.4
IPR005610	Photosystem II Psb28, class 1	PFAM	PF03912	Psb28	coord: 6..111 e-value: 1.2E-43 score: 147.7
IPR005610	Photosystem II Psb28, class 1	PANTHER	PTHR34963	FAMILY NOT NAMED	coord: 1..114
IPR005610	Photosystem II Psb28, class 1	HAMAP	MF_01370	PSII_Psb28	coord: 3..112 score: 30.461342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021698.1	PI0021698.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0009523	photosystem II