PI0021693 (gene) Melon (PI 482460) v1

Overview


Name	PI0021693
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase
Location	chr12: 15374816 .. 15375459 (-)
RNA-Seq Expression	PI0021693
Synteny	PI0021693

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCGCATTGTCTTAGAGAAGGGAGCTAAGGACAAAATCCAACCTCAAAGAAGGCTAAATCAGACTTTGAAAGATGTTGTCATGGAGGAGGTGCTAAAGCTAAAAGATGTCGAAATCATCTATCCCGTCCCGGATAGTACATGGGTGAGTCCAATTCATGTGGTCCCAAAGAAAACAGGGATGACCGTTGTAGAAAATGACAAATGTGAGATGGTTCCAATGTGAGTGCAAAACAGATGAAAAATGTCCATAGACTACCGAAAACTCAATGAGGTAACGAAAAAAATCATTTCCCCTTACCTTTTCTTGATCAAATGATAGAACGCTTAGCGGGTAGATCTTATTTTTGTTTCTTAGACCAATTTTTTGGTTTCTACCAAATCCCCAGTGCATGTGAAGACCAAAATAAAACAACTTTTACTTGTGATTATGGAACTTATGCATTTAGGCACATGCCATTTTGTCTTTGTAATGCATCAGGCACATTCCAACATTGCATGATGAGCATCTTTTCCGACTTTATTGAAAAATGCATAGAAGTTTTCATGAATGATTTCACAATTTATGGTGATAGTTTTGATGCATACTTATCTAGTTTAGAATTAATTCTACATAGATGCATAGAAACTAACATTGTCTGA

mRNA sequence

ATGCACCGCATTGTCTTAGAGAAGGGAGCTAAGGACAAAATCCAACCTCAAAGAAGGCTAAATCAGACTTTGAAAGATGTTGTCATGGAGGAGGTGCTAAAGCTAAAAGATGTCGAAATCATCTATCCCGTCCCGGATAGTACATGGGTGAGTCCAATTCATGTGGTCCCAAAGAAAACAGGGATGACCGTTGTAGAAAATGACAAATACCAATTTTTTGGTTTCTACCAAATCCCCAGTGCATGTGAAGACCAAAATAAAACAACTTTTACTTGTGATTATGGAACTTATGCATTTAGGCACATGCCATTTTGTCTTTGTAATGCATCAGGCACATTCCAACATTGCATGATGAGCATCTTTTCCGACTTTATTGAAAAATGCATAGAAGTTTTCATGAATGATTTCACAATTTATGGTGATAGTTTTGATGCATACTTATCTAGTTTAGAATTAATTCTACATAGATGCATAGAAACTAACATTGTCTGA

Coding sequence (CDS)

ATGCACCGCATTGTCTTAGAGAAGGGAGCTAAGGACAAAATCCAACCTCAAAGAAGGCTAAATCAGACTTTGAAAGATGTTGTCATGGAGGAGGTGCTAAAGCTAAAAGATGTCGAAATCATCTATCCCGTCCCGGATAGTACATGGGTGAGTCCAATTCATGTGGTCCCAAAGAAAACAGGGATGACCGTTGTAGAAAATGACAAATACCAATTTTTTGGTTTCTACCAAATCCCCAGTGCATGTGAAGACCAAAATAAAACAACTTTTACTTGTGATTATGGAACTTATGCATTTAGGCACATGCCATTTTGTCTTTGTAATGCATCAGGCACATTCCAACATTGCATGATGAGCATCTTTTCCGACTTTATTGAAAAATGCATAGAAGTTTTCATGAATGATTTCACAATTTATGGTGATAGTTTTGATGCATACTTATCTAGTTTAGAATTAATTCTACATAGATGCATAGAAACTAACATTGTCTGA

Protein sequence

MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKTGMTVVENDKYQFFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCIEVFMNDFTIYGDSFDAYLSSLELILHRCIETNIV

Homology

[Close]

BLAST of PI0021693 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07
Identity = 27/83 (32.53%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 74  GFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCIEVFM 133
           G++Q+  A  D+ KTT    YG++ FR MPF L NA  TF + M ++  ++++  + V++
Sbjct: 50  GYWQVRIAKGDEPKTTCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYL 109

Query: 134 ND---FTIYGDSFDAYLSSLELI 154
           +D   +TIY +S   ++  L ++
Sbjct: 110 DDLVVYTIYSNSLHEHIKHLRVV 132

[Close]

BLAST of PI0021693 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.4e-06
Identity = 44/166 (26.51%), Postives = 76/166 (45.78%), Query Frame = 0


Query: 4   IVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKTGMT 63
           +V +KG      P +RL      V+    L  K +   YP+P          +P    M 
Sbjct: 223 VVDKKGTDAFGNPNKRL------VIDFRKLNEKTIPDRYPMPS---------IP----MI 282

Query: 64  VVENDKYQFF-------GFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHC 123
           +    K +FF       G++QI  A  D+ KT+F+ + G Y F  +PF L NAS  FQ  
Sbjct: 283 LANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRA 342

Query: 124 MMSIFSDFIEKCIEVFMNDFTIYGDSFDAYLSSLELILHRCIETNI 163
           +  +  + I K   V+++D  I+ ++   ++  ++ +L   I+ N+
Sbjct: 343 LDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDANM 369

[Close]

BLAST of PI0021693 vs. ExPASy TrEMBL
Match: A0A6P8DCT8 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116204368 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.7e-51
Identity = 109/214 (50.93%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 923  MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 982

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 983  GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFL 1042

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 1043 DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1102

[Close]

BLAST of PI0021693 vs. ExPASy TrEMBL
Match: A0A6P8DJV3 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116205261 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 878  MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 937

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 938  GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFL 997

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 998  DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1057

[Close]

BLAST of PI0021693 vs. ExPASy TrEMBL
Match: A0A6P8D4X0 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116204210 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 878  MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 937

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 938  GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFL 997

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 998  DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1057

[Close]

BLAST of PI0021693 vs. ExPASy TrEMBL
Match: A0A6P8E7C5 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116210952 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 1055 MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 1114

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 1115 GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLASKSYFCFL 1174

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 1175 DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1234

[Close]

BLAST of PI0021693 vs. ExPASy TrEMBL
Match: A0A6P8E830 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116212259 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 878  MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 937

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 938  GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFL 997

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 998  DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1057

[Close]

BLAST of PI0021693 vs. NCBI nr
Match: XP_031392309.1 (uncharacterized protein LOC116204368 [Punica granatum])

HSP 1 Score: 211.5 bits (537), Expect = 5.6e-51
Identity = 109/214 (50.93%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 923  MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 982

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 983  GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFL 1042

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 1043 DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1102

[Close]

BLAST of PI0021693 vs. NCBI nr
Match: XP_031400978.1 (uncharacterized protein LOC116210952 [Punica granatum])

HSP 1 Score: 209.5 bits (532), Expect = 2.1e-50
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 1055 MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 1114

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 1115 GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLASKSYFCFL 1174

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 1175 DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1234

[Close]

BLAST of PI0021693 vs. NCBI nr
Match: XP_031402684.1 (uncharacterized protein LOC116212259 [Punica granatum])

HSP 1 Score: 209.5 bits (532), Expect = 2.1e-50
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 878  MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 937

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 938  GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFL 997

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 998  DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1057

[Close]

BLAST of PI0021693 vs. NCBI nr
Match: XP_031393661.1 (uncharacterized protein LOC116205261 [Punica granatum])

HSP 1 Score: 209.5 bits (532), Expect = 2.1e-50
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 878  MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 937

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 938  GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFL 997

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 998  DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1057

[Close]

BLAST of PI0021693 vs. NCBI nr
Match: XP_031392147.1 (uncharacterized protein LOC116204210 [Punica granatum])

HSP 1 Score: 209.5 bits (532), Expect = 2.1e-50
Identity = 108/214 (50.47%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 1    MHRIVLEKGAKDKIQPQRRLNQTLKDVVMEEVLKLKDVEIIYPVPDSTWVSPIHVVPKKT 60
            MHRI+LEK A+ K  PQR+LN T+K+VVM+E+LKL D+ IIYP+ DS WVSPIHVVPKKT
Sbjct: 878  MHRILLEKDAQPKRDPQRKLNPTMKEVVMKEILKLLDLGIIYPISDSQWVSPIHVVPKKT 937

Query: 61   GMTVVENDKYQ------------------------------------------------- 120
            G+T+V+N++ +                                                 
Sbjct: 938  GLTLVKNERGELVPTRVQNGWRVCIDYRKLNAATRKDHFPLPFIDQMLERLAGKSYFCFL 997

Query: 121  --FFGFYQIPSACEDQNKTTFTCDYGTYAFRHMPFCLCNASGTFQHCMMSIFSDFIEKCI 164
              + G+YQI  A EDQ KTTFTC +GT+A+R MPF LC+A GTFQ CMMSIFSD IE CI
Sbjct: 998  DGYSGYYQIVVAPEDQEKTTFTCPFGTFAYRRMPFGLCDAPGTFQRCMMSIFSDMIENCI 1057

The following BLAST results are available for this feature:

BLAST of PI0021693 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	3.0e-07	32.53	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
P10401	4.4e-06	26.51	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]

BLAST of PI0021693 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P8DCT8	2.7e-51	50.93	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116204368 PE=4 SV=1	[more]
A0A6P8DJV3	1.0e-50	50.47	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116205261 PE=4 SV=1	[more]
A0A6P8D4X0	1.0e-50	50.47	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116204210 PE=4 SV=1	[more]
A0A6P8E7C5	1.0e-50	50.47	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116210952 PE=4 SV=1	[more]
A0A6P8E830	1.0e-50	50.47	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116212259 PE=4 SV=1	[more]

BLAST of PI0021693 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031392309.1	5.6e-51	50.93	uncharacterized protein LOC116204368 [Punica granatum]	[more]
XP_031400978.1	2.1e-50	50.47	uncharacterized protein LOC116210952 [Punica granatum]	[more]
XP_031402684.1	2.1e-50	50.47	uncharacterized protein LOC116212259 [Punica granatum]	[more]
XP_031393661.1	2.1e-50	50.47	uncharacterized protein LOC116205261 [Punica granatum]	[more]
XP_031392147.1	2.1e-50	50.47	uncharacterized protein LOC116204210 [Punica granatum]	[more]

BLAST of PI0021693 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..108 e-value: 2.1E-23 score: 84.7
None	No IPR available	CDD	cd01647	RT_LTR	coord: 40..162 e-value: 3.27026E-31 score: 108.837
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021693.1	PI0021693.1	mRNA