PI0021672 (gene) Melon (PI 482460) v1

Overview
NamePI0021672
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionstress-associated endoplasmic reticulum protein 2-like
Locationchr11: 908060 .. 909875 (-)
RNA-Seq ExpressionPI0021672
SyntenyPI0021672
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAATTTTCCTTCTCAGATTGTAATTGTGATGGGTTATTGTTCTAGGCTCTAGATCCCCGATTCGTGTTATTCGTCATTTATCCTGAGTTGGATCTTGTAATTATCTAGATTAGTTCTTGTTGATTTTGGATCCTTTTTCTGTTTTCTTTGTCGAGAATTCAATCTGAATCTGTTCTGTTTCGCCTTTATAGGGTTTTTTTTTTTCCAGTTTGACTTTTAGTTAATTGCCTTCGATTGCATCTCATTACCGGAATTGAGTGGTTAAAATGTTTGTATCTTTGGTCTTTAGACATTGTATTATGTGAGTAATTTGGATTGCTCAAGTCTCTTGATTTGAAAGGCTCTTTAGTTGGCCTAGATCTCCTGATGAAACCTACCGGAGAAGATTGAGCAAAACGTTGTTTACTAGCGGGAACATTTTTGATAGTGAAGAGAAATATTCGGCATTCAAATGGTTGAATATTGTTTCCTTGTTTGAATTTAAGTTGTAGGAAAAGGAACTCTCGGTTGGCCGCTAATCTAAGTTGAGGATTGTTTCCACATGTTTCACTTTTTAAATTTAGATAATGTTAAACTGAGATTTTTGGTTGGAATATGGCATGGGCATTGTTTTTAAGGAAGAAAAATTTGAGCTTTGTGATGATTTCGGATTGTTAGTGTTACCGAATTGACTAGTTAAATTTCGATGTCTTGAGCTGCCTTTCTGAACAATAATTGATGAACTTAACCTTTTGTAGACAACATCAAGGCGTCTTGCAGACCGAAAGGTGGGGAAGTTTGAGAGGAATATCACAAAGAGAGGGTCTGTTCCAGAGACCTCCGTTAAGAAGGGGAAGGAGTATCCTGTTGGGCCTCTGCTGCTTGGTTTCTTCGTATTTGTTGTCATCGGATCATGTAAGACTAATTCTTTGTAGTATCTATATCATTTTAGTTTTTGCTTTAATCTGATAAATAATTGTTGTGGCTAACCAAGTATGCAAGTCTTAGTTCTAGGTATAGAATGGAGCCAAGGACACAAGATAGTATATACTATATAATAAAGAGAAATTCTAGTTTTAATTTTTGAAACTGAAAGTTCTCTTTTTATATATATATATATATATATATATCCTTGAGTACATGAATTTGAATATCTTGCATCGAGGAACGAATACATGCCAATTACTATTAAAAGTTCACTTTGGCCATATATACAAAGTTAGAGTAGACCTTTATCCCCACCCAATCAATTTATTGATATTCAGTAAGCTTTTTCGGTATTCATCTCTAGAGGCTATTAAAATTTTGATCTTTCTGGGACCTTCTTTCGTCCAAACTCTCATGCGATTCGTCTTTCTCCTTGTCTCTTCTGCACATATTGTTCCTCAGCGTAGTTTGCTGAATCTTGGTAGATCCTTTACTTACATTTTAGGTGGTTTAAACCTCATCATGGATTTCAATTTGAATATCTTATTAGGATACAACCTAGCAACAATATATGTTAGGCATTTGAGAAGGGCTACTTTCCCTCAAATTCCCACCATTAAAATTCTTACCAAAATGATTCATCCCAAGTCCCCAACACACTATATTTATAACCAAGGCCCTTTATGCCCTTGCTATTATCCTATCTCTAATTAGGGTTGGGACTCTCACATCTCTCTCTAAATAAAAAAGTTGCCCAGGGTTGATCGCAATCCTAAAAACGTGCAAACTTGCTGTGTCTTTAGAGTCTCTATTGTATCCAAAGTATCATTTTTTTTTCTGATCTTTGTTTATTCAACAGCTCTCTTCCAGATAATCAGGACAGCAACAGGCGGAGGCATGGCTTGA

mRNA sequence

ATGACAACATCAAGGCGTCTTGCAGACCGAAAGGTGGGGAAGTTTGAGAGGAATATCACAAAGAGAGGGTCTGTTCCAGAGACCTCCGTTAAGAAGGGGAAGGAGTATCCTGTTGGGCCTCTGCTGCTTGGTTTCTTCGTATTTGTTGTCATCGGATCATCTCTCTTCCAGATAATCAGGACAGCAACAGGCGGAGGCATGGCTTGA

Coding sequence (CDS)

ATGACAACATCAAGGCGTCTTGCAGACCGAAAGGTGGGGAAGTTTGAGAGGAATATCACAAAGAGAGGGTCTGTTCCAGAGACCTCCGTTAAGAAGGGGAAGGAGTATCCTGTTGGGCCTCTGCTGCTTGGTTTCTTCGTATTTGTTGTCATCGGATCATCTCTCTTCCAGATAATCAGGACAGCAACAGGCGGAGGCATGGCTTGA

Protein sequence

MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIRTATGGGMA
Homology
BLAST of PI0021672 vs. ExPASy Swiss-Prot
Match: Q3T073 (Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus OX=9913 GN=SERP2 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-07
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0

Query: 14 KFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          K  +NIT+RG+V +T   + ++YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

BLAST of PI0021672 vs. ExPASy Swiss-Prot
Match: Q8N6R1 (Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens OX=9606 GN=SERP2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-07
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0

Query: 14 KFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          K  +NIT+RG+V +T   + ++YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

BLAST of PI0021672 vs. ExPASy Swiss-Prot
Match: Q6TAW2 (Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus OX=10090 GN=Serp2 PE=3 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-07
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0

Query: 14 KFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          K  +NIT+RG+V +T   + ++YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

BLAST of PI0021672 vs. ExPASy Swiss-Prot
Match: Q5REZ1 (Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii OX=9601 GN=SERP1 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.4e-05
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 0

Query: 14 KFERNITKRGSVPETSVK-KGKEYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          K  +NIT+RG+V +TS    G++  VGP LL  F+FVV GS++FQII++   G
Sbjct: 13 KHSKNITQRGNVAKTSRNAPGEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65

BLAST of PI0021672 vs. ExPASy Swiss-Prot
Match: Q3ZBR1 (Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus OX=9913 GN=SERP1 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.0e-04
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0

Query: 14 KFERNITKRGSVPETSVKKGKE-YPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          K  +NIT+RG+V +TS    +E   VGP LL  F+FVV GS++FQII++   G
Sbjct: 13 KHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65

BLAST of PI0021672 vs. ExPASy TrEMBL
Match: A0A0A0KD83 (Stress associated endoplasmic reticulum protein OS=Cucumis sativus OX=3659 GN=Csa_6G087710 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-28
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

BLAST of PI0021672 vs. ExPASy TrEMBL
Match: A0A5A7TCU9 (Stress-associated endoplasmic reticulum protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001960 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.9e-28
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
           MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 185 MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFIFVVIGSSLFQIIR 244

Query: 61  TATGGGMA 69
           TATGGGMA
Sbjct: 245 TATGGGMA 252

BLAST of PI0021672 vs. ExPASy TrEMBL
Match: A0A1S3CCR7 (stress-associated endoplasmic reticulum protein 2-like OS=Cucumis melo OX=3656 GN=LOC103498951 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.9e-28
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

BLAST of PI0021672 vs. ExPASy TrEMBL
Match: A0A6J1KYK6 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497550 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.6e-27
Identity = 63/68 (92.65%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKF+RNITKRG+VPET+VKKGK+YPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFDRNITKRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

BLAST of PI0021672 vs. ExPASy TrEMBL
Match: A0A6J1H9C4 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461245 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26
Identity = 62/68 (91.18%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKF+RNIT+RG+VPET+VKKGK+YPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

BLAST of PI0021672 vs. NCBI nr
Match: XP_011656747.1 (stress-associated endoplasmic reticulum protein 2 [Cucumis sativus] >KGN46342.1 hypothetical protein Csa_005217 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

BLAST of PI0021672 vs. NCBI nr
Match: XP_008460008.1 (PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 8.1e-28
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

BLAST of PI0021672 vs. NCBI nr
Match: KAA0039916.1 (stress-associated endoplasmic reticulum protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 8.1e-28
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1   MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
           MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 185 MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFIFVVIGSSLFQIIR 244

Query: 61  TATGGGMA 69
           TATGGGMA
Sbjct: 245 TATGGGMA 252

BLAST of PI0021672 vs. NCBI nr
Match: XP_038907144.1 (stress-associated endoplasmic reticulum protein 2-like [Benincasa hispida])

HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26
Identity = 63/68 (92.65%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVG+FERNITKRG+VP+TS+KKGKEYPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGRFERNITKRGAVPDTSIKKGKEYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

BLAST of PI0021672 vs. NCBI nr
Match: XP_023004123.1 (stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >KAG6592968.1 Stress-associated endoplasmic reticulum protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025380.1 Stress-associated endoplasmic reticulum protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128.6 bits (322), Expect = 2.0e-26
Identity = 63/68 (92.65%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKF+RNITKRG+VPET+VKKGK+YPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFDRNITKRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

BLAST of PI0021672 vs. TAIR 10
Match: AT1G27350.1 (Ribosome associated membrane protein RAMP4 )

HSP 1 Score: 115.2 bits (287), Expect = 2.1e-26
Identity = 56/68 (82.35%), Postives = 63/68 (92.65%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTS+RLADRK+ KF++NI KRG VPET+ KKGK+YPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

BLAST of PI0021672 vs. TAIR 10
Match: AT1G27330.1 (Ribosome associated membrane protein RAMP4 )

HSP 1 Score: 115.2 bits (287), Expect = 2.1e-26
Identity = 56/68 (82.35%), Postives = 63/68 (92.65%), Query Frame = 0

Query: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTS+RLADRK+ KF++NI KRG VPET+ KKGK+YPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q3T0733.7e-0751.92Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus OX=9913 GN=SERP2... [more]
Q8N6R13.7e-0751.92Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens OX=9606 GN=SER... [more]
Q6TAW23.7e-0751.92Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus OX=10090 GN=Se... [more]
Q5REZ13.4e-0549.06Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii OX=9601 GN=SER... [more]
Q3ZBR11.0e-0449.06Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus OX=9913 GN=SERP1... [more]
Match NameE-valueIdentityDescription
A0A0A0KD833.0e-28100.00Stress associated endoplasmic reticulum protein OS=Cucumis sativus OX=3659 GN=Cs... [more]
A0A5A7TCU93.9e-2898.53Stress-associated endoplasmic reticulum protein 2-like OS=Cucumis melo var. maku... [more]
A0A1S3CCR73.9e-2898.53stress-associated endoplasmic reticulum protein 2-like OS=Cucumis melo OX=3656 G... [more]
A0A6J1KYK69.6e-2792.65stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=36... [more]
A0A6J1H9C42.1e-2691.18stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita moschata OX=... [more]
Match NameE-valueIdentityDescription
XP_011656747.16.2e-28100.00stress-associated endoplasmic reticulum protein 2 [Cucumis sativus] >KGN46342.1 ... [more]
XP_008460008.18.1e-2898.53PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Cucumis melo][more]
KAA0039916.18.1e-2898.53stress-associated endoplasmic reticulum protein 2-like [Cucumis melo var. makuwa... [more]
XP_038907144.11.2e-2692.65stress-associated endoplasmic reticulum protein 2-like [Benincasa hispida][more]
XP_023004123.12.0e-2692.65stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >KAG65... [more]
Match NameE-valueIdentityDescription
AT1G27350.12.1e-2682.35Ribosome associated membrane protein RAMP4 [more]
AT1G27330.12.1e-2682.35Ribosome associated membrane protein RAMP4 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010580Stress-associated endoplasmic reticulum proteinPFAMPF06624RAMP4coord: 5..61
e-value: 1.1E-24
score: 86.1
IPR010580Stress-associated endoplasmic reticulum proteinPANTHERPTHR15601STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4coord: 1..68
NoneNo IPR availablePANTHERPTHR15601:SF26STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEINcoord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021672.1PI0021672.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0006486 protein glycosylation
biological_process GO:0015031 protein transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane