PI0021667 (gene) Melon (PI 482460) v1

Overview


Name	PI0021667
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gag-pro-like protein
Location	chr10: 14577577 .. 14578404 (+)
RNA-Seq Expression	PI0021667
Synteny	PI0021667

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAACAAGACAAAGACATGGATAAAATGAGACAAGAGATCAATAATCTTGGGGAGCAGGTTTCAAAGATACTAGAATTGCTTTCGATGGGAAAAGGGAAGGTCATTGTAGATACAGCACAATCAAGCAATCCAGTTCAGGACACCGATGATCCCCTTTATCCTCCAGGGTTTACACCATCTCACACGCATGTTCCGCAGGCTCAAGCCACTCAACACTATGTTGCTATGAATCAACTTTTTGCTGTTCCACCTCCTGTCCCAGATATAGAGCAATTGGAAGCTCAAGCTAATATTCAAGATATGGGGCAAAATGAGAACACTTCGGCTAGGGAAAAACTAGATGTTTTGGAAGAAAGGCTACGAGCAATTGAAGGGACTGACGTTTATGGAAATATTAATGCAACACAACTCTGCTTGGTGTCGGGCTTGATAATTCCAGCAAAGTTTAAAGCTCCTGAATTTGATAAATATGATGGATCCTCGTGTCCGAGAAGTCATCTTATAATGTACTGTAGAAAGATGGCAGCGCATATTAGCAATGATAAATTGTTGATCCATTGCTTCCAAGATAGTTTGACTGGTCCAGCTACTCGATGGTATATTCAATTAGACAATGCACACATTCATGTTTGGAAAGATTTAGCTGATGCATTTTTAAAGCAATACAAACATAATATTGATATGGCTCCAGATCGTTTAGACTTGCAACGGATGGAGAAGAGGAGTTCTGAAAGTTTCAAAGAATATGCTCAACGATGGAGAGACAAGGCCGCTGAGGTTCAGCCACCGTTAACAGACAAAGAAATGACACTATGTTTATGA

mRNA sequence

ATGGAAGAACAAGACAAAGACATGGATAAAATGAGACAAGAGATCAATAATCTTGGGGAGCAGGTTTCAAAGATACTAGAATTGCTTTCGATGGGAAAAGGGAAGGTCATTGTAGATACAGCACAATCAAGCAATCCAGTTCAGGACACCGATGATCCCCTTTATCCTCCAGGGTTTACACCATCTCACACGCATGTTCCGCAGGCTCAAGCCACTCAACACTATGTTGCTATGAATCAACTTTTTGCTGTTCCACCTCCTGTCCCAGATATAGAGCAATTGGAAGCTCAAGCTAATATTCAAGATATGGGGCAAAATGAGAACACTTCGGCTAGGGAAAAACTAGATGTTTTGGAAGAAAGGCTACGAGCAATTGAAGGGACTGACGTTTATGGAAATATTAATGCAACACAACTCTGCTTGGTGTCGGGCTTGATAATTCCAGCAAAGTTTAAAGCTCCTGAATTTGATAAATATGATGGATCCTCGTGTCCGAGAAGTCATCTTATAATGTACTGTAGAAAGATGGCAGCGCATATTAGCAATGATAAATTGTTGATCCATTGCTTCCAAGATAGTTTGACTGGTCCAGCTACTCGATGGTATATTCAATTAGACAATGCACACATTCATGTTTGGAAAGATTTAGCTGATGCATTTTTAAAGCAATACAAACATAATATTGATATGGCTCCAGATCGTTTAGACTTGCAACGGATGGAGAAGAGGAGTTCTGAAAGTTTCAAAGAATATGCTCAACGATGGAGAGACAAGGCCGCTGAGGTTCAGCCACCGTTAACAGACAAAGAAATGACACTATGTTTATGA

Coding sequence (CDS)

ATGGAAGAACAAGACAAAGACATGGATAAAATGAGACAAGAGATCAATAATCTTGGGGAGCAGGTTTCAAAGATACTAGAATTGCTTTCGATGGGAAAAGGGAAGGTCATTGTAGATACAGCACAATCAAGCAATCCAGTTCAGGACACCGATGATCCCCTTTATCCTCCAGGGTTTACACCATCTCACACGCATGTTCCGCAGGCTCAAGCCACTCAACACTATGTTGCTATGAATCAACTTTTTGCTGTTCCACCTCCTGTCCCAGATATAGAGCAATTGGAAGCTCAAGCTAATATTCAAGATATGGGGCAAAATGAGAACACTTCGGCTAGGGAAAAACTAGATGTTTTGGAAGAAAGGCTACGAGCAATTGAAGGGACTGACGTTTATGGAAATATTAATGCAACACAACTCTGCTTGGTGTCGGGCTTGATAATTCCAGCAAAGTTTAAAGCTCCTGAATTTGATAAATATGATGGATCCTCGTGTCCGAGAAGTCATCTTATAATGTACTGTAGAAAGATGGCAGCGCATATTAGCAATGATAAATTGTTGATCCATTGCTTCCAAGATAGTTTGACTGGTCCAGCTACTCGATGGTATATTCAATTAGACAATGCACACATTCATGTTTGGAAAGATTTAGCTGATGCATTTTTAAAGCAATACAAACATAATATTGATATGGCTCCAGATCGTTTAGACTTGCAACGGATGGAGAAGAGGAGTTCTGAAAGTTTCAAAGAATATGCTCAACGATGGAGAGACAAGGCCGCTGAGGTTCAGCCACCGTTAACAGACAAAGAAATGACACTATGTTTATGA

Protein sequence

MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFTPSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHISNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTLCL

Homology

[Close]

BLAST of PI0021667 vs. ExPASy TrEMBL
Match: A0A5D3CXD6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003760 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 235/272 (86.40%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEE+DKDMDKMRQEINNLGEQVSKILELLSMGKGKV VDTAQSSNP+QDTDD +YPPGFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVAVDTAQSSNPIQDTDDHIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +VPQ+Q TQHYV  N L+ VPP VP IE LEAQA IQDMGQNENT A++KLDVLEE
Sbjct: 61  PYHMNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV  LIIPAKFK PEFDKYDGS+CPRSHLIMYCRKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
           +NDKLL+HCFQDSLTGPA+RWYIQLDNAHIH+WKDLADAFLKQYKHNIDMAP+RLDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTGPASRWYIQLDNAHIHIWKDLADAFLKQYKHNIDMAPNRLDLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEYAQRWRD   EVQPPL DKEMT
Sbjct: 241 EKKSSESFKEYAQRWRDMTVEVQPPLIDKEMT 272

[Close]

BLAST of PI0021667 vs. ExPASy TrEMBL
Match: A0A5A7T0H8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00180 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 234/272 (86.03%), Postives = 251/272 (92.28%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEE+DKDMDKMRQEINNLGEQVSKILELLSMGKGK +VDTAQSSNP+QDTDDP+YPPGFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +VPQ+Q TQHYV  N L+ VPP +P IE LEAQA IQDM QNENT A++KLDVLEE
Sbjct: 61  PYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKIQDMEQNENTPAKQKLDVLEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIE TDVYGNI+ATQLCLV GLIIPAKFK PEFDKYDGS+CPRSHLIMYCRKMA HI
Sbjct: 121 RLRAIEETDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMATHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
           +NDKLL+HCFQDSLT PA+RWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQR+
Sbjct: 181 NNDKLLVHCFQDSLTDPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRV 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEYAQRWRD  AEVQPPLTDKEMT
Sbjct: 241 EKKSSESFKEYAQRWRDMVAEVQPPLTDKEMT 272

[Close]

BLAST of PI0021667 vs. ExPASy TrEMBL
Match: A0A5A7V3W7 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002400 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.8e-133
Identity = 232/272 (85.29%), Postives = 252/272 (92.65%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEE+DKDMDKMRQEINN+GEQVSKILELLSMGKGKV VDT QSSNP+QDTDDP+YPP FT
Sbjct: 1   MEEKDKDMDKMRQEINNIGEQVSKILELLSMGKGKVAVDTTQSSNPIQDTDDPIYPPEFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +VPQ+Q TQHY+  + L+ VPP VP +E LEAQA IQDMGQNENT A++KLDVLEE
Sbjct: 61  PYHMNVPQSQTTQHYIPTDPLYVVPPIVPGVEHLEAQAKIQDMGQNENTLAKQKLDVLEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV GLIIPAKFK PEFDKYDGS+CPRSHLIMYCRKMA HI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAEHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
           +NDKLL+HCFQDSLTGPA+RWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAP+RLDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPNRLDLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEYAQRW+D  AEVQPPLTDKEMT
Sbjct: 241 EKKSSESFKEYAQRWKDMTAEVQPPLTDKEMT 272

[Close]

BLAST of PI0021667 vs. ExPASy TrEMBL
Match: A0A5A7V8B6 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00150 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 231/272 (84.93%), Postives = 253/272 (93.01%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEE+DKDMDKMRQEI+NLGEQVSKILELLSMGKGKV VDTAQ SNP+QDTDDP+YPPGFT
Sbjct: 1   MEEKDKDMDKMRQEISNLGEQVSKILELLSMGKGKVAVDTAQLSNPIQDTDDPIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +VPQ+Q TQHY+  N L+ VPP VP +E LEAQA IQDMGQN+NT A++KLD+LEE
Sbjct: 61  PYHMNVPQSQTTQHYIPTNPLYVVPPIVPGVEHLEAQAKIQDMGQNKNTLAKQKLDILEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV GLIIPAKFK PEFDKYDGS+CPRSHLIMYCRKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
           +NDKLL+HCFQDSL GPA+RWYIQLDNAHIHVWKDLADAFLKQ+KHNIDMAPDRL+LQRM
Sbjct: 181 NNDKLLVHCFQDSLIGPASRWYIQLDNAHIHVWKDLADAFLKQHKHNIDMAPDRLNLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEY QRWRD AAEVQPPLT+KEMT
Sbjct: 241 EKKSSESFKEYTQRWRDMAAEVQPPLTNKEMT 272

[Close]

BLAST of PI0021667 vs. ExPASy TrEMBL
Match: A0A1S3CIL9 (uncharacterized protein LOC103501400 OS=Cucumis melo OX=3656 GN=LOC103501400 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 231/272 (84.93%), Postives = 253/272 (93.01%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEE+DKDMDKMRQEI+NLGEQVSKILELLSMGKGKV VDTAQ SNP+QDTDDP+YPPGFT
Sbjct: 1   MEEKDKDMDKMRQEISNLGEQVSKILELLSMGKGKVAVDTAQLSNPIQDTDDPIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +VPQ+Q TQHY+  N L+ VPP VP +E LEAQA IQDMGQN+NT A++KLD+LEE
Sbjct: 61  PYHMNVPQSQTTQHYIPTNPLYVVPPIVPGVEHLEAQAKIQDMGQNKNTLAKQKLDILEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV GLIIPAKFK PEFDKYDGS+CPRSHLIMYCRKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
           +NDKLL+HCFQDSL GPA+RWYIQLDNAHIHVWKDLADAFLKQ+KHNIDMAPDRL+LQRM
Sbjct: 181 NNDKLLVHCFQDSLIGPASRWYIQLDNAHIHVWKDLADAFLKQHKHNIDMAPDRLNLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEY QRWRD AAEVQPPLT+KEMT
Sbjct: 241 EKKSSESFKEYTQRWRDMAAEVQPPLTNKEMT 272

[Close]

BLAST of PI0021667 vs. NCBI nr
Match: XP_031742360.1 (uncharacterized protein LOC116404324 [Cucumis sativus])

HSP 1 Score: 505.4 bits (1300), Expect = 3.2e-139
Identity = 246/272 (90.44%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEEQDKDMDKMRQ+INNLGEQVSKILELLS GKGKV+V+TAQSSNPVQDTDDP+YPPGFT
Sbjct: 1   MEEQDKDMDKMRQDINNLGEQVSKILELLSAGKGKVVVETAQSSNPVQDTDDPIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +  Q+Q  QHYVAMN LF VPPPVPDIEQLEAQA IQDMGQNENT A++KLDVLEE
Sbjct: 61  PRHMNATQSQTAQHYVAMNPLFDVPPPVPDIEQLEAQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV GLIIP KFK PEFDKYDGSSCPRSHLIMYCRKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPTKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
            NDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM
Sbjct: 181 GNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEYAQRWRD AAEVQPPLTDKEMT
Sbjct: 241 EKKSSESFKEYAQRWRDIAAEVQPPLTDKEMT 272

[Close]

BLAST of PI0021667 vs. NCBI nr
Match: XP_031741309.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 9.2e-139
Identity = 245/272 (90.07%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEEQDKDMDKMRQ+INNLGEQVSKILELLS GKGKV+V+TAQSSNPVQDTDDP+YPPGFT
Sbjct: 1   MEEQDKDMDKMRQDINNLGEQVSKILELLSAGKGKVVVETAQSSNPVQDTDDPIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +  Q+Q  QHYVAMN LF VPPPVPDIEQLE QA IQDMGQNENT A++KLDVLEE
Sbjct: 61  PRHMNATQSQTAQHYVAMNPLFDVPPPVPDIEQLETQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV GLIIP KFK PEFDKYDGSSCPRSHLIMYCRKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPTKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
            NDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM
Sbjct: 181 GNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEYAQRWRD AAEVQPPLTDKEMT
Sbjct: 241 EKKSSESFKEYAQRWRDIAAEVQPPLTDKEMT 272

[Close]

BLAST of PI0021667 vs. NCBI nr
Match: XP_031738857.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 9.2e-139
Identity = 245/272 (90.07%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEEQDKDMDKMRQ+INNLGEQVSKILELLS GKGKV+V+TAQSSNPVQDTDDP+YPPGFT
Sbjct: 1   MEEQDKDMDKMRQDINNLGEQVSKILELLSAGKGKVVVETAQSSNPVQDTDDPIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +  Q+Q  QHYVAMN LF VPPPVPDIEQLE QA IQDMGQNENT A++KLDVLEE
Sbjct: 61  PRHMNATQSQTAQHYVAMNPLFDVPPPVPDIEQLETQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV GLIIP KFK PEFDKYDGSSCPRSHLIMYCRKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPTKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
            NDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM
Sbjct: 181 GNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEYAQRWRD AAEVQPPLTDKEMT
Sbjct: 241 EKKSSESFKEYAQRWRDIAAEVQPPLTDKEMT 272

[Close]

BLAST of PI0021667 vs. NCBI nr
Match: XP_031737553.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116402446 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 9.2e-139
Identity = 245/272 (90.07%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEEQDKDMDKMRQ+INNLGEQVSKILELLS GKGKV+V+TAQSSNPVQDTDDP+YPPGFT
Sbjct: 1   MEEQDKDMDKMRQDINNLGEQVSKILELLSAGKGKVVVETAQSSNPVQDTDDPIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +  Q+Q  QHYVAMN LF VPPPVPDIEQLE QA IQDMGQNENT A++KLDVLEE
Sbjct: 61  PRHMNATQSQTAQHYVAMNPLFDVPPPVPDIEQLETQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV GLIIP KFK PEFDKYDGSSCPRSHLIMYCRKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPTKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
            NDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM
Sbjct: 181 GNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEYAQRWRD AAEVQPPLTDKEMT
Sbjct: 241 EKKSSESFKEYAQRWRDIAAEVQPPLTDKEMT 272

[Close]

BLAST of PI0021667 vs. NCBI nr
Match: XP_031742474.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116404360 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 9.2e-139
Identity = 245/272 (90.07%), Postives = 255/272 (93.75%), Query Frame = 0


Query: 1   MEEQDKDMDKMRQEINNLGEQVSKILELLSMGKGKVIVDTAQSSNPVQDTDDPLYPPGFT 60
           MEEQDKDMDKMRQ+INNLGEQVSKILELLS GKGKV+V+TAQSSNPVQDTDDP+YPPGFT
Sbjct: 1   MEEQDKDMDKMRQDINNLGEQVSKILELLSAGKGKVVVETAQSSNPVQDTDDPIYPPGFT 60

Query: 61  PSHTHVPQAQATQHYVAMNQLFAVPPPVPDIEQLEAQANIQDMGQNENTSAREKLDVLEE 120
           P H +  Q+Q  QHYVAMN LF VPPPVPDIEQLE QA IQDMGQNENT A++KLDVLEE
Sbjct: 61  PRHMNATQSQTAQHYVAMNPLFDVPPPVPDIEQLETQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIEGTDVYGNINATQLCLVSGLIIPAKFKAPEFDKYDGSSCPRSHLIMYCRKMAAHI 180
           RLRAIEGTDVYGNI+ATQLCLV GLIIP KFK PEFDKYDGSSCPRSHLIMYCRKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPTKFKVPEFDKYDGSSCPRSHLIMYCRKMAAHI 180

Query: 181 SNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240
            NDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM
Sbjct: 181 GNDKLLIHCFQDSLTGPATRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRM 240

Query: 241 EKRSSESFKEYAQRWRDKAAEVQPPLTDKEMT 273
           EK+SSESFKEYAQRWRD AAEVQPPLTDKEMT
Sbjct: 241 EKKSSESFKEYAQRWRDIAAEVQPPLTDKEMT 272

The following BLAST results are available for this feature:

BLAST of PI0021667 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXD6	1.3e-133	86.40	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T0H8	1.3e-133	86.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V3W7	2.8e-133	85.29	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7V8B6	1.1e-132	84.93	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157...	[more]
A0A1S3CIL9	1.1e-132	84.93	uncharacterized protein LOC103501400 OS=Cucumis melo OX=3656 GN=LOC103501400 PE=...	[more]

BLAST of PI0021667 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742360.1	3.2e-139	90.44	uncharacterized protein LOC116404324 [Cucumis sativus]	[more]
XP_031741309.1	9.2e-139	90.07	LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]	[more]
XP_031738857.1	9.2e-139	90.07	LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]	[more]
XP_031737553.1	9.2e-139	90.07	LOW QUALITY PROTEIN: uncharacterized protein LOC116402446 [Cucumis sativus]	[more]
XP_031742474.1	9.2e-139	90.07	LOW QUALITY PROTEIN: uncharacterized protein LOC116404360 [Cucumis sativus]	[more]

BLAST of PI0021667 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..128
None	No IPR available	COILS	Coil	Coil	coord: 1..28
None	No IPR available	PANTHER	PTHR34491	A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATED	coord: 3..273
None	No IPR available	PANTHER	PTHR34491:SF19	GAG-PRO-LIKE PROTEIN	coord: 3..273
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 193..264 e-value: 1.3E-8 score: 35.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021667.1	PI0021667.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity