PI0021661 (gene) Melon (PI 482460) v1

Overview


Name	PI0021661
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Beta-galactosidase
Location	chr12: 18431483 .. 18436673 (+)
RNA-Seq Expression	PI0021661
Synteny	PI0021661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGCAAGCAAGGAGCAATGGACGTCATACTTTAACAAACTTTCCCTGTTGTGGCAAGAGATGGATCTGTGTAGAGACATTGTTTGGGATACCTCTAACGACAGTTTACAGTTTGCCAAGATAGAAGAAGCGGACCGTGTGTATGATTTTCTCGTCGGCCTCCATCCTAAGTTTGACACTGTTTGTGGTCGTATCCTTGGCCAAAGGCCTCTCTCATCCCTGATGGAAGTCTGCTATGAAGTCCGTCTTGAAGAAGATCGCACGAATGTCGTGGGTGTCATAACTACTTCTGCCACCGATTCTGCCGCCTTTAATGCTCGATCTTCCAACCCCGGTCATGAGAAAAACAATGGTAAACCAGTTCCCACCTGCGAGCACTATAAGAAACCATGGCACACTAAAGATCAGTGTTAGAAGCTTCATGGACGTCCTCCAGGGGGCAAGAAACGCTCCTTCAATGACAAACAGTGTTCTGGACGTGCCTACATGAGTGAGTCTACGGGAACATCTCAATCGTCTGGTACTACTGTTAACCAGAACGGTCCCAATTCACCCTCCGTTAGGAGCCATTGCTCAGTCAGGTATGCCTCAATCCCTTAGTCTTATTAGTGTTGATGGGAAGAATCCCTAGATTCTCGATTCGGGAGCCACCGATCACTTGACAGGGTCCTTAGAACAGTTTGTCTCTTACACTCCTTGTGCTGGTAATGAAAAGATAAGAATAGCTGATGGCTCTCTAGCTCCTATTGCTGGGAAGGGACACATTATTCCCTTTAACGGGCTATCCCTCCAGAATGTGTTGCATGTGCCTAAAATTTCCTATAGCTTATTGTCTATAAGCAAGATCACTAACGAGCTGAACTGCAAAGCAACCTTCTTACCTGATTCTGTTTCCTTTCAGGATTTAAGCTCAGGGAGGACGATTGGCACTGCCCGGCATAACAGGGGACTCTATCTCCTTGATGATGATGTCTCTACTAGTAATGTCTCTAGGACTAGCTTATTGTCTTCTTACTTTACTACTTCTGAACAAGACTGTATGTTGTGGCATTTTCGCTTAGGCCACCCAAACTTTACTTATATGAAGCATCTATTTCCTCATCTCTTCTCTAATATTGATGTGTCCTTATTAACCTGTGATGTGTGCATTCAAGCCAAACAACATCGGGTCTCATTTCACTCTCAATCATATAAACCAACCCAACCTTTCACCCTTATCCATAGTGATGTGTGGGGCCCCTCCAAGGTCACCACCTCCTCTGGCAAACGGTGGTTTGTGACCTTCATTGATGACCATACCCGTCTTACCTGGGTCTACCTTATCACTGATAAATCTGAGGTCCCCTCCATCTTCCAAAATTTCTATCAGACTATTGAAACTCAATTTAATGCAAACATTGCAATCCTTCGGAGTGATAATGGTCGAGAGTTCCAAAACCATACCCTTGGTGAGTTTCTGATTTCCAAAGGGATTGTTCACCAAAGCTCTTGTGCTTATATCCCTCAACAAAATGGGATTGCTGAGCAAAAAACCGTCACCTTTTGGAAGTTGCTCGTTCTCTCATGCTCTCTACTTCTCTCCCCTCCTATCTATGGGGCGATGCTGTGCTTACTGCAGCTTACCTCATCAATAGGATGCCCTCTCGTGTCCTGCACCTCTAAACACCTTTAGAGTGTCTTAAAGATTTGTATCCCTCCACCCGCCTCATTTCTGAGGTTCCCCTCCGTGTGTTCGGATGCACGGCCTATGTGCATAACTTTGGCCCTAACCAGACAAAATTCACTCTACGTGCTCAGGTGTGTGTTTGTTGGGTATCCTCTCCACCAACGGGGCTATAAATGTTTTCATCCTCCTTCCCAAAAGTACTTTACTACTATGGATGTTACCTTTCGTGAGGATTGTCCTTACTTTCCTGTTAGCCATCTTCAGGGGGAGAGTGTAAGTGAAGAGCCTATCAAACAACCTATCACCTTACCCGACCCAGAGTCCTATACTATAGTCCTACCTACAAATCAAGTTCCTTAGAAGACCTATTATAGGAGAAATCTCAGAAAGGTAGAGTCACCTGCTGATCTGCCAGCTCCAGTCCAAGACTCTGAACCTTCACGAGATCAAGGTATGCCTAATTCTATTGACTCATGCGTTGACTGTAAAATGAGTAAAACTGACAGGTCCAATAGCGATATTCCTGAAGAAGTGGGAGGAGAAAACAGTGTTGATGAGATTGCAATCAGAATTGAAAATGGCAGAAATGAGACTAAACAGGGTCATTCAGGTAATTGTGATGAGTATGATCCTTCTCTTGATATTCCCATTGCTCTGAGGAAAGGGACCAGATCCTGCACAAGACACCCCATTTGCAACTATGTTTCCTACAAGAACCTATCTCCTCAGTTCAGAGCCTTCACAACAAGCTTAGATTCTACAGTGATACCGACAAATATCCATAAGGCGCTTGAATGCCCTGAATGGAAAACAGCTGTTATGGAAGAGATGAAAGCTCTTGAAATGAATCAGACTTGGGAAATGTGCACTCTTCCCAAGGGACACAAAACTGTGGGATGCAAATAGGTGTTCACTCTAAAATACAAAGCTGACGGAACTCTCGACAGACATAAGGCCAGGTTAGTTGCAAAAGGGTTTACCCAAACTTATGGTGTTGACTACTCTGAAACTTTTTCCCAGTGGCAAAACTAAATACTGTTAGAGTCTTGCTATCAGTTGCAGTAAATAAGGACTGGCCCTTATACCAGCTTGGTGTCAAGAATGCGTTTCTAAATGGAGACTTGGAAGAGGAAGTCTACATGAGCCCTCCTCCAGGGTTTGAAACTCAGTTTGAACATCGGTCTGTAAACTTCAGAAATCCCTGTATGGGCTGAAACAGTCACCGAGGGCATGGTTTGAGAGGTTTACTACCTTTGTCAAGTCCCAAGGGTATAGTCAAGGGCACTCTGATCACACCTTATTCACAAAAGTTTCCAAGACAGGGAAGATCGCAGTTTTGATTGTTTATGTTGATGATATTTTTTGTCTGGAGATGATCAGGCAGAAATCAGTCAACTAAAGCAGAAAATGGGTAATGAATTTGAAATCAAAGACTTGGGAAACCTAAGATACTTCCTTGGGATGGAGGTGGCTAGATCTAAAGAAGGCATCTCCGTGTCTCAAAGGAAATACACCCTCGATTTGCTTACCGAGACATGTATGTTGGGATGTCGTCCTACTGACACTCCCATTGAATTCAATTGCAAGCTAGGAAAGTCTGATGATCAGGTTCCAGTAGATAAAGAACAGTATCAACGCCTTGTGGGTAAGCTGATTTACTTATCCCATACTCGTCCTGACATTTCCTTTGCCGTGAGTGTTGTCAGTCAGTTTATGCAGGCTCCCTATGAGGAACATATTGAAGCCGTCAACAGAATTCTGAGATACTTGAAAACCACACCAGGCAAAGATCTGATGTTTAGAAAGACAAACAGAAAAACCATTGAGGCTTATACTAATTCTGATTGGGTCGGGTCTGTGGTTGACAGGAAATTCACCTCCGGGTATTGCACCTTTTCTGGGGTAACCTTGTAACTTGGAGAAGCAAGAAGCAAGGAGTTGTGGCTAGAAGTAGTGCTGAGGCTGAGTACCGAGCAATGAGTTGGGGATATGTGAGGAAATTTGGCTAAAAAAAGTCTTGACTGATCTTCATCAAGAATGTGAGCTGCCAATGAAACTATTCTGTGATAATAAGCAACTATTAGTATTGCCAACAATCCAGTTCAGCATGATAGAACGAAACATGTGGAGATTGACCGACACTTCATTAAAGAAAGACTGGACACTGGTAGCATTTGCATTCCTTATATTCCCTCGAGCCAACAGGTTGCAGATGTTCTTACCAAGGGTCTCCCCAGACAGAATTTCGATTTTTGCATCAGCAAGTTGGGTCTCACTGATATTTATGTCCCAACTTGAGGGGGAGTGTTAGTTTGTATGGGCTTGGCCCGTGGAAAGAGATTTGACCTAAATCTCTTTCCTTTTGTATAAATCCCCTTCCTTTTTATTTTGTATTCTTCTCTATTTATTCCAGCATGTTAGTTGTTTGTATTCACAAGTAAATTAAGAAATACATTACAGACTCGTGGTTTTTCTCCGGTACTCGAGTTTCCACGTAATTCGGTGTCCCTTTTCTTTACCGCTTTCAATACAAAGTATCGAAAACAACTCAATTCCAAGCTAAAACGAGTGAAAATGGGCAAAACGAAGATGAATTGGCAATTTCGTAATTAAAAGGAGTCGACGCCGCCCTCAACGCCAAAACATAACACCTTAACTCGAGAGCATCATTTTGATGCAGCACCATGGTGCCCTATTAGTACCACAGCGTTAGCCAAAACGCCTCGGTGCCCAACTTAGCGCCACAAAACTATAAATTTTGAGTTTACGTCAAGGCCCACGAGTCGAACGCTTCCTTAAGCTTAATGCTTTGGATTGGCTATTGTTAGAATGTATGGGCTTGGCCCATAAAGAGATTTGACCTAAATCTCCTTCCTTTTTACTCATTGTTGTTCTCTTTTATCAAACCCGTACATATTTTGGATTCATTAGAAAATAATAATAATAATCTAGACTCGTGGTTTTTCTTTCGATACTCGAGTTTCCACATAACTCAGTGTCCCTATTCTTACCGCTTTCAATATGGTATCAGAGTAGGGTAAAGATGAAACCCTAGACACTGAACCTGATGAAACCAAAGCCAACCACGAGTCCACCGCCGCCGTCGTGGATGCCGCCTTCGCCGTCGCTATGGAAAAATTAGTCCATCAGCTTCAGAAGACGCTGACGGTCAGTCTGTTTGACCCTCGGAGTCATCCGCGCAGCACAGCCTCCAGAATCTCCCTCACGCACCGTCAATGTAGGGCGTGTGGGCCCATGCGCCGTTACCAATTCATCTCACCGCCAAGTCCAATGGCTCTCTGGTGTCGTCGCCTGTCCAACCACCATAACCTCTTTCCCATCCGCAAGCCCATGTGTCGCCGCGTCTCTAGTAATGGACAACCGCCAATTTTGGTATCCTAACTGTCTCTACCTCTTAACCCTTTACAGCAGCCTTATTTCCATGGTACCGGAGTTGACAAAACTACAACAGAGTTGGGTTTGAAGTTGGCGAGACCTCCTCGCAATCCAAAAACCCGGTAA

mRNA sequence

ATGAATGCAAGCAAGGAGCAATGGACGTCATACTTTAACAAACTTTCCCTGTTGTGGCAAGAGATGGATCTGTGTAGAGACATTGTTTGGGATACCTCTAACGACAGTTTACAGTTTGCCAAGATAGAAGAAGCGGACCGTGTGTATGATTTTCTCGTCGGCCTCCATCCTAAGTTTGACACTGTTTGTGGTCGTATCCTTGGCCAAAGGCCTCTCTCATCCCTGATGGAAGTCTGCTATGAAGTCCGTCTTGAAGAAGATCGCACGAATGTCGTGGGTGTCATAACTACTTCTGCCACCGATTCTGCCGCCTTTAATGCTCGATCTTCCAACCCCGGTCATGAGAAAAACAATGGGGGCAAGAAACGCTCCTTCAATGACAAACAGTGTTCTGGACGTGCCTACATGAGTGAGTCTACGGGAACATCTCAATCGTCTGGTACTACTGTTAACCAGAACGGTCCCAATTCACCCTCCGTTAGGAGCCATTGCTCAGTCAGGAGAAATCTCAGAAAGGTAGAGTCACCTGCTGATCTGCCAGCTCCAGTCCAAGACTCTGAACCTTCACGAGATCAAGGTATGCCTAATTCTATTGACTCATGCGTTGACTGTAAAATGAGTAAAACTGACAGGTCCAATAGCGATATTCCTGAAGAAGTGGGAGGAGAAAACAGTGTTGATGAGATTGCAATCAGAATTGAAAATGGCAGAAATGAGACTAAACAGGGTCATTCAGACACTGAACCTGATGAAACCAAAGCCAACCACGAGTCCACCGCCGCCGTCGTGGATGCCGCCTTCGCCGTCGCTATGGAAAAATTAGTCCATCAGCTTCAGAAGACGCTGACGCAGCCTTATTTCCATGGTACCGGAGTTGACAAAACTACAACAGAGTTGGGTTTGAAGTTGGCGAGACCTCCTCGCAATCCAAAAACCCGGTAA

Coding sequence (CDS)

ATGAATGCAAGCAAGGAGCAATGGACGTCATACTTTAACAAACTTTCCCTGTTGTGGCAAGAGATGGATCTGTGTAGAGACATTGTTTGGGATACCTCTAACGACAGTTTACAGTTTGCCAAGATAGAAGAAGCGGACCGTGTGTATGATTTTCTCGTCGGCCTCCATCCTAAGTTTGACACTGTTTGTGGTCGTATCCTTGGCCAAAGGCCTCTCTCATCCCTGATGGAAGTCTGCTATGAAGTCCGTCTTGAAGAAGATCGCACGAATGTCGTGGGTGTCATAACTACTTCTGCCACCGATTCTGCCGCCTTTAATGCTCGATCTTCCAACCCCGGTCATGAGAAAAACAATGGGGGCAAGAAACGCTCCTTCAATGACAAACAGTGTTCTGGACGTGCCTACATGAGTGAGTCTACGGGAACATCTCAATCGTCTGGTACTACTGTTAACCAGAACGGTCCCAATTCACCCTCCGTTAGGAGCCATTGCTCAGTCAGGAGAAATCTCAGAAAGGTAGAGTCACCTGCTGATCTGCCAGCTCCAGTCCAAGACTCTGAACCTTCACGAGATCAAGGTATGCCTAATTCTATTGACTCATGCGTTGACTGTAAAATGAGTAAAACTGACAGGTCCAATAGCGATATTCCTGAAGAAGTGGGAGGAGAAAACAGTGTTGATGAGATTGCAATCAGAATTGAAAATGGCAGAAATGAGACTAAACAGGGTCATTCAGACACTGAACCTGATGAAACCAAAGCCAACCACGAGTCCACCGCCGCCGTCGTGGATGCCGCCTTCGCCGTCGCTATGGAAAAATTAGTCCATCAGCTTCAGAAGACGCTGACGCAGCCTTATTTCCATGGTACCGGAGTTGACAAAACTACAACAGAGTTGGGTTTGAAGTTGGCGAGACCTCCTCGCAATCCAAAAACCCGGTAA

Protein sequence

MNASKEQWTSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILGQRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNNGGKKRSFNDKQCSGRAYMSESTGTSQSSGTTVNQNGPNSPSVRSHCSVRRNLRKVESPADLPAPVQDSEPSRDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGENSVDEIAIRIENGRNETKQGHSDTEPDETKANHESTAAVVDAAFAVAMEKLVHQLQKTLTQPYFHGTGVDKTTTELGLKLARPPRNPKTR

Homology

[Close]

BLAST of PI0021661 vs. ExPASy TrEMBL
Match: A0A5D3DBU1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00060 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-53
Identity = 129/236 (54.66%), Postives = 160/236 (67.80%), Query Frame = 0


Query: 22  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILGQRPLSSLMEVCYE 81
           MDLCR+ VW TSND + +AK+EEADR YDFL GL+PKFD VCG ILGQRPL SLMEVCYE
Sbjct: 1   MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYE 60

Query: 82  VRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNNGGKKRSFNDKQCSGRAYMSESTG 141
           VRLEEDRTN + ++TT A DS AFN RSS   H++   GKK S N KQ S  AY+SE TG
Sbjct: 61  VRLEEDRTNAMSILTTPAIDSTAFNGRSST--HDR---GKKHSSNKKQNSRCAYVSEITG 120

Query: 142 TSQSSGTTVNQNGPNSPSVRSHCSV-----------RRNLR-KVESPADLPAPVQDSEPS 201
           TSQS+G T +QN P +  V +   +           +RNL+ ++ES A    P QDSEP 
Sbjct: 121 TSQSTGPTASQNRPRTLRVIAQSVLTTNQVPWKTYYKRNLKEEIESSASQSTPDQDSEPP 180

Query: 202 RDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGENSVDEIAIRIENGRNETKQGHS 246
           +DQGM N I++CVD KMS+ DR +  IPE V  ++  D+  +R +   NE +QGHS
Sbjct: 181 QDQGMENPIETCVDNKMSENDRYDV-IPENVEEKDIGDKTEVRAKTSNNEAEQGHS 230

[Close]

BLAST of PI0021661 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 6.4e-49
Identity = 111/174 (63.79%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   TSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILG 68
           T+YFNKLSLLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+PKFD VCGRILG
Sbjct: 281 TTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILG 340

Query: 69  QRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNN---------- 128
           QRPL SLMEVC+EVRLEEDRTN +GV+TT   DSAAF+ARSSN   +KNN          
Sbjct: 341 QRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHC 400

Query: 129 ------------------GGKKRSFNDKQCSGRAYMSEST--GTSQSSGTTVNQ 153
                             GGKKRS N+KQ SGRAY+SE+T   TSQS+  TV+Q
Sbjct: 401 KKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQ 454

[Close]

BLAST of PI0021661 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-05
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 167  RRNLRK-VESP-ADLPAPVQDSEPSRDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGEN 226
            RRNLRK V SP +  PAPVQ+ EP RDQGM N    C +  MS+ D+S+    E +  +N
Sbjct: 961  RRNLRKEVGSPTSQPPAPVQNFEPPRDQGMENPTKPCTNNTMSENDKSDIAFLENMEEKN 1020

Query: 227  SVDEIAIRIENGRNETKQGHS 246
              DE  +RIE   +E +QGH+
Sbjct: 1021 CDDETEVRIETSNDEAEQGHT 1041

HSP 2 Score: 204.5 bits (519), Expect = 6.4e-49
Identity = 111/174 (63.79%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   TSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILG 68
           T+YFNKLSLLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+PKFD VCGRILG
Sbjct: 281 TTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILG 340

Query: 69  QRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNN---------- 128
           QRPL SLMEVC+EVRLEEDRTN +GV+TT   DSAAF+ARSSN   +KNN          
Sbjct: 341 QRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHC 400

Query: 129 ------------------GGKKRSFNDKQCSGRAYMSEST--GTSQSSGTTVNQ 153
                             GGKKRS N+KQ SGRAY+SE+T   TSQS+  TV+Q
Sbjct: 401 KKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQ 454

[Close]

BLAST of PI0021661 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-05
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 167  RRNLRK-VESP-ADLPAPVQDSEPSRDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGEN 226
            RRNLRK V SP +  PAPVQ+ EP RDQGM N    C +  MS+ D+S+    E +  +N
Sbjct: 961  RRNLRKEVGSPTSQPPAPVQNFEPPRDQGMENPTKPCTNNTMSENDKSDIAFLENMEEKN 1020

Query: 227  SVDEIAIRIENGRNETKQGHS 246
              DE  +RIE   +E +QGH+
Sbjct: 1021 CDDETEVRIETSNDEAEQGHT 1041

HSP 2 Score: 204.5 bits (519), Expect = 6.4e-49
Identity = 111/174 (63.79%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   TSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILG 68
           T+YFNKLSLLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+PKFD VCGRILG
Sbjct: 281 TTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILG 340

Query: 69  QRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNN---------- 128
           QRPL SLMEVC+EVRLEEDRTN +GV+TT   DSAAF+ARSSN   +KNN          
Sbjct: 341 QRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHC 400

Query: 129 ------------------GGKKRSFNDKQCSGRAYMSEST--GTSQSSGTTVNQ 153
                             GGKKRS N+KQ SGRAY+SE+T   TSQS+  TV+Q
Sbjct: 401 KKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQ 454

[Close]

BLAST of PI0021661 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.1e-06
Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 167  RRNLRK-VESP-ADLPAPVQDSEPSRDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGEN 226
            RRNLRK V SP +  PAPVQ+ EP RDQGM N    C +  MS+ D+S+  + E +  +N
Sbjct: 961  RRNLRKEVGSPTSQPPAPVQNFEPPRDQGMENPTKPCTNNTMSENDKSDIAVLENMEEKN 1020

Query: 227  SVDEIAIRIENGRNETKQGHS 246
              DE  +RIE   +E +QGH+
Sbjct: 1021 CDDETEVRIETSNDEAEQGHT 1041

HSP 2 Score: 204.5 bits (519), Expect = 6.4e-49
Identity = 111/174 (63.79%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   TSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILG 68
           T+YFNKLSLLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+PKFD VCGRILG
Sbjct: 281 TTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILG 340

Query: 69  QRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNN---------- 128
           QRPL SLMEVC+EVRLEEDRTN +GV+TT   DSAAF+ARSSN   +KNN          
Sbjct: 341 QRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHC 400

Query: 129 ------------------GGKKRSFNDKQCSGRAYMSEST--GTSQSSGTTVNQ 153
                             GGKKRS N+KQ SGRAY+SE+T   TSQS+  TV+Q
Sbjct: 401 KKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQ 454

[Close]

BLAST of PI0021661 vs. NCBI nr
Match: KAA0048797.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK20749.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 219.9 bits (559), Expect = 3.0e-53
Identity = 129/236 (54.66%), Postives = 160/236 (67.80%), Query Frame = 0


Query: 22  MDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILGQRPLSSLMEVCYE 81
           MDLCR+ VW TSND + +AK+EEADR YDFL GL+PKFD VCG ILGQRPL SLMEVCYE
Sbjct: 1   MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYE 60

Query: 82  VRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNNGGKKRSFNDKQCSGRAYMSESTG 141
           VRLEEDRTN + ++TT A DS AFN RSS   H++   GKK S N KQ S  AY+SE TG
Sbjct: 61  VRLEEDRTNAMSILTTPAIDSTAFNGRSST--HDR---GKKHSSNKKQNSRCAYVSEITG 120

Query: 142 TSQSSGTTVNQNGPNSPSVRSHCSV-----------RRNLR-KVESPADLPAPVQDSEPS 201
           TSQS+G T +QN P +  V +   +           +RNL+ ++ES A    P QDSEP 
Sbjct: 121 TSQSTGPTASQNRPRTLRVIAQSVLTTNQVPWKTYYKRNLKEEIESSASQSTPDQDSEPP 180

Query: 202 RDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGENSVDEIAIRIENGRNETKQGHS 246
           +DQGM N I++CVD KMS+ DR +  IPE V  ++  D+  +R +   NE +QGHS
Sbjct: 181 QDQGMENPIETCVDNKMSENDRYDV-IPENVEEKDIGDKTEVRAKTSNNEAEQGHS 230

[Close]

BLAST of PI0021661 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-48
Identity = 111/174 (63.79%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   TSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILG 68
           T+YFNKLSLLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+PKFD VCGRILG
Sbjct: 281 TTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILG 340

Query: 69  QRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNN---------- 128
           QRPL SLMEVC+EVRLEEDRTN +GV+TT   DSAAF+ARSSN   +KNN          
Sbjct: 341 QRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHC 400

Query: 129 ------------------GGKKRSFNDKQCSGRAYMSEST--GTSQSSGTTVNQ 153
                             GGKKRS N+KQ SGRAY+SE+T   TSQS+  TV+Q
Sbjct: 401 KKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQ 454

[Close]

BLAST of PI0021661 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-05
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 167  RRNLRK-VESP-ADLPAPVQDSEPSRDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGEN 226
            RRNLRK V SP +  PAPVQ+ EP RDQGM N    C +  MS+ D+S+    E +  +N
Sbjct: 961  RRNLRKEVGSPTSQPPAPVQNFEPPRDQGMENPTKPCTNNTMSENDKSDIAFLENMEEKN 1020

Query: 227  SVDEIAIRIENGRNETKQGHS 246
              DE  +RIE   +E +QGH+
Sbjct: 1021 CDDETEVRIETSNDEAEQGHT 1041

HSP 2 Score: 204.5 bits (519), Expect = 1.3e-48
Identity = 111/174 (63.79%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   TSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILG 68
           T+YFNKLSLLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+PKFD VCGRILG
Sbjct: 281 TTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILG 340

Query: 69  QRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNN---------- 128
           QRPL SLMEVC+EVRLEEDRTN +GV+TT   DSAAF+ARSSN   +KNN          
Sbjct: 341 QRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHC 400

Query: 129 ------------------GGKKRSFNDKQCSGRAYMSEST--GTSQSSGTTVNQ 153
                             GGKKRS N+KQ SGRAY+SE+T   TSQS+  TV+Q
Sbjct: 401 KKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQ 454

[Close]

BLAST of PI0021661 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-05
Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 167  RRNLRK-VESP-ADLPAPVQDSEPSRDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGEN 226
            RRNLRK V SP +  PAPVQ+ EP RDQGM N    C +  MS+ D+S+  + E +  +N
Sbjct: 935  RRNLRKEVGSPTSQPPAPVQNFEPPRDQGMENPTKPCTNNTMSENDKSDIAVLENMEEKN 994

Query: 227  SVDEIAIRIENGRNETKQGHS 246
              DE  +RIE   +E +QGH+
Sbjct: 995  CDDETEVRIETSNDEAEQGHT 1015

HSP 2 Score: 204.5 bits (519), Expect = 1.3e-48
Identity = 111/174 (63.79%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   TSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILG 68
           T+YFNKLSLLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+PKFD VCGRILG
Sbjct: 281 TTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILG 340

Query: 69  QRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNN---------- 128
           QRPL SLMEVC+EVRLEEDRTN +GV+TT   DSAAF+ARSSN   +KNN          
Sbjct: 341 QRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHC 400

Query: 129 ------------------GGKKRSFNDKQCSGRAYMSEST--GTSQSSGTTVNQ 153
                             GGKKRS N+KQ SGRAY+SE+T   TSQS+  TV+Q
Sbjct: 401 KKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQ 454

[Close]

BLAST of PI0021661 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-05
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 167  RRNLRK-VESP-ADLPAPVQDSEPSRDQGMPNSIDSCVDCKMSKTDRSNSDIPEEVGGEN 226
            RRNLRK V SP +  PAPVQ+ EP RDQGM N    C +  MS+ D+S+    E +  +N
Sbjct: 961  RRNLRKEVGSPTSQPPAPVQNFEPPRDQGMENPTKPCTNNTMSENDKSDIAFLENMEEKN 1020

Query: 227  SVDEIAIRIENGRNETKQGHS 246
              DE  +RIE   +E +QGH+
Sbjct: 1021 CDDETEVRIETSNDEAEQGHT 1041

HSP 2 Score: 204.5 bits (519), Expect = 1.3e-48
Identity = 111/174 (63.79%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   TSYFNKLSLLWQEMDLCRDIVWDTSNDSLQFAKIEEADRVYDFLVGLHPKFDTVCGRILG 68
           T+YFNKLSLLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+PKFD VCGRILG
Sbjct: 281 TTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILG 340

Query: 69  QRPLSSLMEVCYEVRLEEDRTNVVGVITTSATDSAAFNARSSNPGHEKNN---------- 128
           QRPL SLMEVC+EVRLEEDRTN +GV+TT   DSAAF+ARSSN   +KNN          
Sbjct: 341 QRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHC 400

Query: 129 ------------------GGKKRSFNDKQCSGRAYMSEST--GTSQSSGTTVNQ 153
                             GGKKRS N+KQ SGRAY+SE+T   TSQS+  TV+Q
Sbjct: 401 KKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQ 454

The following BLAST results are available for this feature:

BLAST of PI0021661 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DBU1	1.5e-53	54.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29...	[more]
A0A5D3BJK7	6.4e-49	63.79	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3BJK7	1.1e-05	46.91	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	1.1e-05	46.91	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	5.1e-06	46.91	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]

Pages

BLAST of PI0021661 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048797.1	3.0e-53	54.66	reverse transcriptase [Cucumis melo var. makuwa] >TYK20749.1 reverse transcripta...	[more]
TYJ99952.1	1.3e-48	63.79	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYJ99952.1	2.3e-05	46.91	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	1.1e-05	46.91	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	2.3e-05	46.91	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

Pages

BLAST of PI0021661 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..164
None	No IPR available	PANTHER	PTHR34222:SF37	SUBFAMILY NOT NAMED	coord: 7..122
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 7..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021661.1	PI0021661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0000166	nucleotide binding