PI0021627 (gene) Melon (PI 482460) v1

Overview
NamePI0021627
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 3153087 .. 3154237 (+)
RNA-Seq ExpressionPI0021627
SyntenyPI0021627
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTGCTCTACAAAAATAATAAGGTTTTTTTCTTTGTCCAAAAATGGCTTCTAAGATTTCTCTCATTTGGCAACTGGTAGTGGTTTTAATGGCTATTTTAAGTTATAGTGTTGCAGCAAGGTATCGGGTTTCTACACCTCAAACTGCTTGTAAGTGAATCCTAAGCCCATTTCTTGTGGATATATGGATAGTAAAAAAATTTGCATCCATAAAGATATTTATTTTAATTTCGTTTTCTATTATATACATGTATCTGTGTAGTTCCTTCCAAAACATGATGAAACTGAAACGATATAAAAAAGACTAACGGATGAAATTGCACCCGCAAAAAAAAAAAGATATCTTTTCTTTGCTTAGTTGGGTTGGGATGTTCTTTCAAATCATATATGTGTAAACAGTAAACTAACAATTCAATATAGAACTCAATGCAAATATACAAAGGTTGGCCCTAGCTAGGTTTAGGTTTGGTCACTCTATTTGATTCTTTCAAGTCGATCATAATGTTATTCAATTCAATTTTTTTTGTTCGGTCCAACAAATTAATATTATTTCACAACTTTTTGGTTCGGACAAATTAATATCATTTCACAGTTTTTTCTTTTTATATGATTCATCTATTTAAATTGTAGCTAAACATAAATAATGGAGTTTATATATATATTTACAACCATTTAAGACATATAGCAAAAAAGTCCAATTTTAGACTATTTCTACAAATTAATGGGGCTGTCTACTTTATTATGTTTCAATCTAATTATTTATTGTATTTTTTCTTATCTTTTTCAGACAAGGATGTAGTGGGAATCAAAAGCATAAAGAAGGTGGCTAAGCCCATTCCAAGGAAAGATAAACCTAGGGGTGGAAATTACTAATCAAGTTGGAAAAATAATTAAATACATTGGAGGATGTTAAATTTTCGTAACATTTTACTTCATAATAAATTATTTTCGATCAAAATAACATGTAGTTCAATTTACATAATGTTTATACTAAAAGAAGTACTCTTTCCACACATTATTACTCCAATGAATTCGCTTGAAAAAAGAAACTTCATATAATCTCCCTTTAGCCTTTTGTCAAATTCTTAATTGACTATATTAATCTTTTGTAGCATGTAACAAAATCAAGGATGACATTGTTTTTGGTTTTAG

mRNA sequence

TATTGCTCTACAAAAATAATAAGGTTTTTTTCTTTGTCCAAAAATGGCTTCTAAGATTTCTCTCATTTGGCAACTGGTAGTGGTTTTAATGGCTATTTTAAGTTATAGTGTTGCAGCAAGGTATCGGGTTTCTACACCTCAAACTGCTTACAAGGATGTAGTGGGAATCAAAAGCATAAAGAAGGTGGCTAAGCCCATTCCAAGGAAAGATAAACCTAGGGGTGGAAATTACTAATCAAGTTGGAAAAATAATTAAATACATTGGAGGATGTTAAATTTTCGTAACATTTTACTTCATAATAAATTATTTTCGATCAAAATAACATGTAGTTCAATTTACATAATGTTTATACTAAAAGAAGTACTCTTTCCACACATTATTACTCCAATGAATTCGCTTGAAAAAAGAAACTTCATATAATCTCCCTTTAGCCTTTTGTCAAATTCTTAATTGACTATATTAATCTTTTGTAGCATGTAACAAAATCAAGGATGACATTGTTTTTGGTTTTAG

Coding sequence (CDS)

ATGGCTTCTAAGATTTCTCTCATTTGGCAACTGGTAGTGGTTTTAATGGCTATTTTAAGTTATAGTGTTGCAGCAAGGTATCGGGTTTCTACACCTCAAACTGCTTACAAGGATGTAGTGGGAATCAAAAGCATAAAGAAGGTGGCTAAGCCCATTCCAAGGAAAGATAAACCTAGGGGTGGAAATTACTAA

Protein sequence

MASKISLIWQLVVVLMAILSYSVAARYRVSTPQTAYKDVVGIKSIKKVAKPIPRKDKPRGGNY
Homology
[Close]
BLAST of PI0021627 vs. ExPASy TrEMBL
Match: A0A0A0KW87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022260 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.3e-21
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 0 

Query: 1  MASKISLIWQLVVVLMAILSYSVAARYRVSTPQTAYKDVVGIKSIKKVAKPIPRKDKPRG 60
          MASKISLIWQLVVVLMAILS SVAAR+RVSTPQTAYKD VGIKSIKKV KP+P+KDKPRG
Sbjct: 1  MASKISLIWQLVVVLMAILSCSVAARHRVSTPQTAYKDAVGIKSIKKVFKPVPKKDKPRG 60

Query: 61 GNY 64
          GNY
Sbjct: 61 GNY 63

[Close]
BLAST of PI0021627 vs. NCBI nr
Match: KGN53139.1 (hypothetical protein Csa_015279 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 1.5e-20
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 0 

Query: 1  MASKISLIWQLVVVLMAILSYSVAARYRVSTPQTAYKDVVGIKSIKKVAKPIPRKDKPRG 60
          MASKISLIWQLVVVLMAILS SVAAR+RVSTPQTAYKD VGIKSIKKV KP+P+KDKPRG
Sbjct: 1  MASKISLIWQLVVVLMAILSCSVAARHRVSTPQTAYKDAVGIKSIKKVFKPVPKKDKPRG 60

Query: 61 GNY 64
          GNY
Sbjct: 61 GNY 63

The following BLAST results are available for this feature:
BLAST of PI0021627 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021627 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW877.3e-2190.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022260 PE=4 SV=1[more]
BLAST of PI0021627 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53139.11.5e-2090.48hypothetical protein Csa_015279 [Cucumis sativus][more]
BLAST of PI0021627 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021627.1PI0021627.1mRNA