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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGTATGGAAGGTAAAAAAAAAATGGATTTAAGGATTTACTAAATTTTTATAATTGGAAATGGAGCAGTTGCAGTTGCAGAATTATTCCATTTTCAAAATATATATATATATATGTATATATATACACTTTATGGATCTGATCTGACCTCTTAAATCTTCAGGGAAGAGGAAAGAGAAAAATTGGCATTGTGATGAAGAGAGAGATGAAGAGAGGGAAGCATTTGGTGCTGAAAAATGCGATCCAAAATGGAAATAAACAAATCACATTGGCTGTTGGAATGTCCACCATCCACATGATGATACTCATACTGTTCCCCCTTTTTCAATTCATCGCCTGTACTGTAAAGTTATGCCATCTCCGCTGAAAATCGACGACAAGATTTGAAGTCAATATTCACAACAGAAACAGAATTATCAGAGCGGCCGATTTCAAATTCAGGGGAATCGCCTTTGTTTACAACTTGA mRNA sequence ATGGGTATGGAAGGAAAGAGAAAAATTGGCATTGTGATGAAGAGAGAGATGAAGAGAGGGAAGCATTTGGTGCTGAAAAATGCGATCCAAAATGGAAATAAACAAATCACATTGGCTGTTGGAATGTCCACCATCCACATGATGATACTCATACTGTTCCCCCTTTTTCAATTCATCGCCTATTTGAAGTCAATATTCACAACAGAAACAGAATTATCAGAGCGGCCGATTTCAAATTCAGGGGAATCGCCTTTGTTTACAACTTGA Coding sequence (CDS) ATGGGTATGGAAGGAAAGAGAAAAATTGGCATTGTGATGAAGAGAGAGATGAAGAGAGGGAAGCATTTGGTGCTGAAAAATGCGATCCAAAATGGAAATAAACAAATCACATTGGCTGTTGGAATGTCCACCATCCACATGATGATACTCATACTGTTCCCCCTTTTTCAATTCATCGCCTATTTGAAGTCAATATTCACAACAGAAACAGAATTATCAGAGCGGCCGATTTCAAATTCAGGGGAATCGCCTTTGTTTACAACTTGA Protein sequence MGMEGKRKIGIVMKREMKRGKHLVLKNAIQNGNKQITLAVGMSTIHMMILILFPLFQFIAYLKSIFTTETELSERPISNSGESPLFTT
Homology
BLAST of PI0021575 vs. ExPASy TrEMBL
Match: A0A0A0L4N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664350 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.8e-26 Identity = 78/106 (73.58%), Postives = 80/106 (75.47%), Query Frame = 0
Query: 1 MGMEGKRK---IGIVMKREMKRGKHLVLKNAIQNGNKQITLAVGMSTIHMMILILFPLFQ 60
MGMEGKRK +R+ RGKHLVLKNAIQNGNKQITLAVGMSTIHMMILILFPLFQ
Sbjct: 1 MGMEGKRKEKNWQCDEERDEGRGKHLVLKNAIQNGNKQITLAVGMSTIHMMILILFPLFQ 60
Query: 61 FIA---------------YLKSIFTTETELSERPISNSGESPLFTT 89
FIA LKSIFTTETELSERPISNSGESPLFTT
Sbjct: 61 FIALYCKVMPSPLKIDDKILKSIFTTETELSERPISNSGESPLFTT 106
BLAST of PI0021575 vs. NCBI nr
Match: KGN55527.1 (hypothetical protein Csa_012641 [Cucumis sativus]) HSP 1 Score: 127.5 bits (319), Expect = 5.7e-26 Identity = 78/106 (73.58%), Postives = 80/106 (75.47%), Query Frame = 0
Query: 1 MGMEGKRK---IGIVMKREMKRGKHLVLKNAIQNGNKQITLAVGMSTIHMMILILFPLFQ 60
MGMEGKRK +R+ RGKHLVLKNAIQNGNKQITLAVGMSTIHMMILILFPLFQ
Sbjct: 1 MGMEGKRKEKNWQCDEERDEGRGKHLVLKNAIQNGNKQITLAVGMSTIHMMILILFPLFQ 60
Query: 61 FIA---------------YLKSIFTTETELSERPISNSGESPLFTT 89
FIA LKSIFTTETELSERPISNSGESPLFTT
Sbjct: 61 FIALYCKVMPSPLKIDDKILKSIFTTETELSERPISNSGESPLFTT 106
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L4N5 | 2.8e-26 | 73.58 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664350 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN55527.1 | 5.7e-26 | 73.58 | hypothetical protein Csa_012641 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016020 |
membrane |
|
